Information report for Bra004858
Gene Details
Functional Annotation
- RNA binding protein which cotranscriptional splicing of a key floral repressor gene FLOWERING LOCUS C (FLC), , facilitates R-loop formation near FLC intron I to repress its transcription, thereby promoting the floral transition. inhibition of cotranscriptional splicing of FLC by nuclear HRLP condensates constitutes the molecular basis for down-regulation of FLC transcript levels.
Homologous
- Actinidia chinensis: CEY00_Acc16140
- Arabidopsis thaliana: AT2G44710
- Brassica napus: BnaA05G0047300ZS, BnaC04G0052900ZS
- Brassica oleracea: Bo4g023970
- Citrullus lanatus: Cla97C05G083680
- Gossypium hirsutum: Gohir.A11G074700, Gohir.D11G079300, Gohir.A11G074600, Gohir.D11G079400
- Juglans regia: Jr05_02460, Jr05_02450
- Populus trichocarpa: POPTR_014G051500v3
- Prunus persica: PRUPE_2G120600
- Sesamum indicum: SIN_1009863
- Vitis vinifera: VIT_15s0021g01160
Gene Resources
- Pfam: PF00076 PF08777 PF11608 PF13893
- UniProt: A0A816TBC6
- EMBL: HG994359
- AlphaFoldDB: A0A816TBC6
- InterPro: IPR000504 , IPR012677 , IPR035979
- PANTHER: PTHR21245
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- SMR: A0A816TBC6
- CDD: cd00590
Sequences
gDNA Sequence
- >Bra004858
TGCCACCAAAGGTTGTCAAGAGAGGAGGAGGAGCCGCCGCGAGACGAGGCGGTAGGGTCACGAGATCGGCTGTCAAGGCTCAGAATCCGCCAATTGAATCCGCCGATGACGGAGAGACATCCGTCTCCGATGCTGTGGATGCGAAGGAAGAGACGCCGGAGGAGGAGGAGGGTAAATCTATCGAGGAAGAGAATCAATTAGACGAGTCGAAGCAATTGGATGATCTCGAAGCTGCGGCGAATCCAAACGACGTCGTTCCGCCTCAAAGTAAGATGATTTTTCATTGTTTTTAACGGATCCAATCTTCGATTTGATGAAAAGTTTGTGACTTGTTGACCGTAGAATGATTTAGATTTTAGAGCTAACTCTTCTAACTTGGTCCTGAAATATTCGCCTAGTCCCAAATATTTAAAATAAAATTAGATTGGCAAAATTTTTATTAAAACATTTACTAAATAGTCTACTGCTCCCAGGTCCGGCCCTGTTGTAGGTTTTGTTAACTTTAGGAATAGTGTAGATGTTTTACTCAGCTTTTAACTCGCAGAGGAGACTGTGGATGATTTGGGGAAAGATGAAAGATTGGATTTAGATGACAATGAGCCAGAGTATGACGCTGATGATTACGGCGGGGAGGAGGAGGAGTTTGAGGAGAGGGAGGAGGAGTATCATGAGTTGGTTAACCAGGAGGAGGATGAGTTTGAGGCCGAGGTAGAAGGTGAGGAGATTGGAGATCTTCAGGAGAGCGAAGGCGATGCTGAAGAAGAAGCCAAGCTTGGAGAAGCTGGCCATGTGGGAGAGGAAGATGACGTTCTCAACGATAGGCGTAAGAGTAAGGAGTTTGAGATCTTTGTTGGGAGCTTGGACAAGGGAGCTACGGAGGAGGATTTGAAGAAAGTGTTTGGTCACGTTGGGGAGGTGACTGAGGTTAGGATTGTGAAGAATCCGCAGACGAATAAGAGCAAAGGTTATGCTTTCCTGCGTTTTGCTACTGTGGAACAAGCGAAACGAGCTGTTAAAGAGCTTAAAAGCCCAATGGTAAACCCGTCTACAACTTTAGTATTTGATGGAGAGTTTGTGCTAGCTTTTACATTGTGTGTATACATTGGGACTGCAGATCAATGGTAAAAAGTGTGGTGTAACTGCAAGCCAAGATAATGATACTCTCCTCATTGCTAACATATGCAAGACATGGACCTCAGAAGCTGTAAGTATCAGCGTGTCCATTGATATGTCACAATTAAAACCCCAACTCCACAGTTCGTGGTGATTTTTGACCGTTGGGTCTTTTGCTGTGTGTTTCAGTTGAGGGAGAAGCTGAAACACTATGGCGTTGAGAGTATGGATGAGATTGCTTTGGTAGAGGACAGCGACAATGCCAACATGAACCGAGGGTATGCGTTTTTGGATTTCGCATCTCGCTCGGATGCCGTGGATGCTCACAAACGCCTTATAAGGAAGGAAGTGGTGTTTGGACTTGAAAAGCCTGCGAAGGTTTCTTTTGCAGATTCCTTCTTGGATCCGGAAGATGAGATGATGGCGCAGGTACTCACAATGCAGGATCATTTATTTGTTGCATGCAAACTTTCATCCTGCCATTGTCTTCTTTTGAGCGTTGGAGGAGTTTATAAGGGCAGGCATGGATGCCACCTACCTATTCACTTAATTGTTTTTTCTTTTATGTCTCTGGATGGTAGCTTAGAATGCTTTCTAACAACATTTTAGATACTTGATTATTGATTGTTGGTGATTATATTTATCTGGCTGTAGTACTTAATTTAATTGGTGTTGCAGGTTAAGACTATCTTCATTGATGGACTGTCAACATCATGGAGTGAAGAGCATGTTAGAGACCTTTTGAAAAGATATGGCAAACTTGAGAAAATTGAGCTTGCGCGCAATATGCCATCAGCCAGGAGGAAAGACTTTGGTTTTGTAACTTTCGATACCCATGAGGCTGCTGTGACTTGTGCCAAATCTATCAACAACTCAGAGCTAGGCGAAGGAGAGGACAAGGTATATGCCTCTATTTTAATGGCTTATCCTTGTTTAAGGCAATTATATTCTTGATTTCTAATTCCTCCCTTTTTTTCAGGCAAAAGTGAGGGCACGCTTGTCTAGACCACTTCATGGAGCAGGCAAAGGCAGACAGCCCAGTCGCTCAGACCACCGGTCTAGTAGGCATGGGAGTAGACGATCTGGAAGGAGTTCACTGGCTCGTCTGCCACCTCGTAGCTCTAGAGGCGTTGGACCTCGGGCCCCACCTCCTAGTAGTGCAAAGAGAGTTAGTGGATCAAGAGGAAGACGTCCACGACCACCTCTGCCTCCACCTGCAAGAGCTAGGCCCTCTAGGCCCTTGCCACCACCTGCAAGATCCACGCCCTTGCCACCACCTGCAAGATCCAGGCCCTTCCCCCCACCTGCAAGATCCAGGCCCTTACCACCACCTGCAAGATCCAGGCCCTTGCCACCACCTGCTAGGTCTTATGACAGAAGACCTCCAGGTACCACTGGGACTTGTTGTTTATCCATGTTCAGTTATCTTTTCTTTGTTCAATGTATTTGAGCTTTTTTTATTTTGCAGTTCCTCCGTATCCAAAGGCTAGCTTGAAGAGGGACTATGGTCGGCGCGATGATCTTCTTCCTCCAAGAAGCAGACCAGCTCTGAGCTATAGTAGCTCCAGGCTTTCTCCTGAGAGGCATCTGTCTTACAGAGATGATTATGCACCTCGTGGGTCTGCTTATTCAGATATTCCTAGAGATTCTTCTCGCTTAGAAATGAGGAGGCCGTACGGGGAAGACCTTTACAGTCCGAGGTTTGAAAGACCTCCTCCAAGTTACAGTGAAGGGAGATCTCGTGCTTATGATGAGCCTCTTCCTGGATCAAAGCGACCATATTCTGCATTGGTCTGATTTATTGCCTTCTCTGACCATTTTGTTCTCTAATCAAACTATATGATTGTTTTCTTAAACAAGTGTTTATATCATTCAGGATGACGTTCCTCCCCGTTATGCTGACGTCGATGCTCGTCATTCAAGAGCTCGTCTGGACTATGATCTTGGCCCATCTCAGTATGGAGAATCATATGGGGACCGGTATGTTCTCGTTCTATGGATATCTTTGTGATATATGTATGTCTTAGTTTCTTACTTGCATGTTTATTTTAGGATTCCTAGATCTAGTTTAGGATATGGAAGCAGCCGAAATGCAATGACAAGCCATGACTCGCGTGGTCCATATAGCAGCAGTCGTCAGGGAATGGATTATGGAGGAGGTTTGTTTGATAACTTTCTGTTGTGGCTTAGCATACAGCAATACTGCGTCGAGATGCAAACACTTACATGGCTATATTGCTTTACTTCAGGTTCGTATAGTAGCAGCGATGTAGTAGGAATGTACTCATCAAGCTATGGTAGTGAACCACCCAGAAGAGATGTAAGTTCAAGCTATGGTAGTGACATACCCCCCAGAAGAGATGTAAGTGGCTTCAGAAACATTCTCGTTTTCTCTTTTTTGTTGGAAAGTTGAGTTGAGAGTAACTTTTTATTGTTGTAATTACAGGGAGGAGGTAGCTCGTATTCTTCAGTATACTCAAGTCGTGGACTGGGTGGTAGTAGTTACTCAGGTGGTGGTGGTGGTCCAGGATCATACTACTGA
CDS Sequence
- >Bra004858
ATGCCACCAAAGGTTGTCAAGAGAGGAGGAGGAGCCGCCGCGAGACGAGGCGGTAGGGTCACGAGATCGGCTGTCAAGGCTCAGAATCCGCCAATTGAATCCGCCGATGACGGAGAGACATCCGTCTCCGATGCTGTGGATGCGAAGGAAGAGACGCCGGAGGAGGAGGAGGGTAAATCTATCGAGGAAGAGAATCAATTAGACGAGTCGAAGCAATTGGATGATCTCGAAGCTGCGGCGAATCCAAACGACGTCGTTCCGCCTCAAAAGGAGACTGTGGATGATTTGGGGAAAGATGAAAGATTGGATTTAGATGACAATGAGCCAGAGTATGACGCTGATGATTACGGCGGGGAGGAGGAGGAGTTTGAGGAGAGGGAGGAGGAGTATCATGAGTTGGTTAACCAGGAGGAGGATGAGTTTGAGGCCGAGGTAGAAGGTGAGGAGATTGGAGATCTTCAGGAGAGCGAAGGCGATGCTGAAGAAGAAGCCAAGCTTGGAGAAGCTGGCCATGTGGGAGAGGAAGATGACGTTCTCAACGATAGGCGTAAGAGTAAGGAGTTTGAGATCTTTGTTGGGAGCTTGGACAAGGGAGCTACGGAGGAGGATTTGAAGAAAGTGTTTGGTCACGTTGGGGAGGTGACTGAGGTTAGGATTGTGAAGAATCCGCAGACGAATAAGAGCAAAGGTTATGCTTTCCTGCGTTTTGCTACTGTGGAACAAGCGAAACGAGCTGTTAAAGAGCTTAAAAGCCCAATGATCAATGGTAAAAAGTGTGGTGTAACTGCAAGCCAAGATAATGATACTCTCCTCATTGCTAACATATGCAAGACATGGACCTCAGAAGCTTTGAGGGAGAAGCTGAAACACTATGGCGTTGAGAGTATGGATGAGATTGCTTTGGTAGAGGACAGCGACAATGCCAACATGAACCGAGGGTATGCGTTTTTGGATTTCGCATCTCGCTCGGATGCCGTGGATGCTCACAAACGCCTTATAAGGAAGGAAGTGGTGTTTGGACTTGAAAAGCCTGCGAAGGTTTCTTTTGCAGATTCCTTCTTGGATCCGGAAGATGAGATGATGGCGCAGGTTAAGACTATCTTCATTGATGGACTGTCAACATCATGGAGTGAAGAGCATGTTAGAGACCTTTTGAAAAGATATGGCAAACTTGAGAAAATTGAGCTTGCGCGCAATATGCCATCAGCCAGGAGGAAAGACTTTGGTTTTGTAACTTTCGATACCCATGAGGCTGCTGTGACTTGTGCCAAATCTATCAACAACTCAGAGCTAGGCGAAGGAGAGGACAAGGCAAAAGTGAGGGCACGCTTGTCTAGACCACTTCATGGAGCAGGCAAAGGCAGACAGCCCAGTCGCTCAGACCACCGGTCTAGTAGGCATGGGAGTAGACGATCTGGAAGGAGTTCACTGGCTCGTCTGCCACCTCGTAGCTCTAGAGGCGTTGGACCTCGGGCCCCACCTCCTAGTAGTGCAAAGAGAGTTAGTGGATCAAGAGGAAGACGTCCACGACCACCTCTGCCTCCACCTGCAAGAGCTAGGCCCTCTAGGCCCTTGCCACCACCTGCAAGATCCAGGCCCTTACCACCACCTGCAAGATCCAGGCCCTTGCCACCACCTGCTAGGTCTTATGACAGAAGACCTCCAGTTCCTCCGTATCCAAAGGCTAGCTTGAAGAGGGACTATGGTCGGCGCGATGATCTTCTTCCTCCAAGAAGCAGACCAGCTCTGAGCTATAGTAGCTCCAGGCTTTCTCCTGAGAGGCATCTGTCTTACAGAGATGATTATGCACCTCGTGGGTCTGCTTATTCAGATATTCCTAGAGATTCTTCTCGCTTAGAAATGAGGAGGCCGTACGGGGAAGACCTTTACAGTCCGAGGTTTGAAAGACCTCCTCCAAGTTACAGTGAAGGGAGATCTCGTGCTTATGATGAGCCTCTTCCTGGATCAAAGCGACCATATTCTGCATTGGATGACGTTCCTCCCCGTTATGCTGACGTCGATGCTCGTCATTCAAGAGCTCGTCTGGACTATGATCTTGGCCCATCTCAGTATGGAGAATCATATGGGGACCGGATTCCTAGATCTAGTTTAGGATATGGAAGCAGCCGAAATGCAATGACAAGCCATGACTCGCGTGGTCCATATAGCAGCAGTCGTCAGGGAATGGATTATGGAGGAGGTTCGTATAGTAGCAGCGATGTAGTAGGAATGTACTCATCAAGCTATGGTAGTGAACCACCCAGAAGAGATGTAAGTTCAAGCTATGGTAGTGACATACCCCCCAGAAGAGATGGAGGAGGTAGCTCGTATTCTTCAGTATACTCAAGTCGTGGACTGGGTGGTAGTAGTTACTCAGGTGGTGGTGGTGGTCCAGGATCATACTACTGA
Protein Sequence
- >Bra004858
MPPKVVKRGGGAAARRGGRVTRSAVKAQNPPIESADDGETSVSDAVDAKEETPEEEEGKSIEEENQLDESKQLDDLEAAANPNDVVPPQKETVDDLGKDERLDLDDNEPEYDADDYGGEEEEFEEREEEYHELVNQEEDEFEAEVEGEEIGDLQESEGDAEEEAKLGEAGHVGEEDDVLNDRRKSKEFEIFVGSLDKGATEEDLKKVFGHVGEVTEVRIVKNPQTNKSKGYAFLRFATVEQAKRAVKELKSPMINGKKCGVTASQDNDTLLIANICKTWTSEALREKLKHYGVESMDEIALVEDSDNANMNRGYAFLDFASRSDAVDAHKRLIRKEVVFGLEKPAKVSFADSFLDPEDEMMAQVKTIFIDGLSTSWSEEHVRDLLKRYGKLEKIELARNMPSARRKDFGFVTFDTHEAAVTCAKSINNSELGEGEDKAKVRARLSRPLHGAGKGRQPSRSDHRSSRHGSRRSGRSSLARLPPRSSRGVGPRAPPPSSAKRVSGSRGRRPRPPLPPPARARPSRPLPPPARSRPLPPPARSRPLPPPARSYDRRPPVPPYPKASLKRDYGRRDDLLPPRSRPALSYSSSRLSPERHLSYRDDYAPRGSAYSDIPRDSSRLEMRRPYGEDLYSPRFERPPPSYSEGRSRAYDEPLPGSKRPYSALDDVPPRYADVDARHSRARLDYDLGPSQYGESYGDRIPRSSLGYGSSRNAMTSHDSRGPYSSSRQGMDYGGGSYSSSDVVGMYSSSYGSEPPRRDVSSSYGSDIPPRRDGGGSSYSSVYSSRGLGGSSYSGGGGGPGSYY