Information report for Bra003518
Gene Details
Functional Annotation
- Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation. Mutations in TIR1 block auxin stimulation of flavonoid synthesis.
Homologous
- Brassica napus: BnaA07G0222100ZS, BnaC08G0417600ZS, BnaC04G0258600ZS, BnaA09G0568100ZS, BnaA04G0003900ZS
- Brassica oleracea: Bo6g079740, Bo4g098350, Bo8g098290
- Glycine max: Glyma.10G021500, Glyma.02G152800, GmTIR1A
- Juglans regia: Jr08_12700
- Manihot esculenta: MANES_05G067800, MANES_01G214300
- Prunus avium: Pav_sc0000848.1_g430.1.mk
- Prunus persica: PRUPE_8G253300
Sequences
gDNA Sequence
- >Bra003518
CATAACACATTAGTAGTGATGATTTGCCTGGAAACACTCATTGATGACTGTTGGTCCATGTTCCAGACGAAGTCAGGCATGTCAAACCGAGGACCCGCTACTGTTCGGTATATAAACACTCTCTCAACAGCGCAGCTCTCTGGTCTCGAGTCAGGTGGACCCCGCTCATCGATGACTTCCACATTGAGCTTTGGCATCTTCTGTCCTAATAACTTACAGGCTCCAAAACTCACGGAACAAGAAGACATCCAAAGAGATCGCATTGTCTCCAGCTTCGAAGCATTTGCCAATAACGCCTTGTCTCCAAACGGGCAGTCCCTTATCTCTAGCTTCCTCAGGCTATCGCACCCTGACAAAACATGATGCATCCCTAAGTCACTGTCTCCTGCAAACGCCACCGATAGCATCTCCATCTTCTTTGCATACTTCCCAATGTATTCGAAAACCTTGTCGGTCAAGAGCCCTGATAGGGAGAGACGCCGGAGATCTTTGCAGTGCTCTACAATGGCTCCGAAACCCACATCCAGTGGCTCTAGTGTTAGATGGTCAGGGGCTTTCGGCTCAATGATGCACAAACGGAAGCGAGTCATGTTGGGACGTTTCCTAGCAATCGCTACCAACGCATCATTGGTCATTTGGCGGCAAAAGTAGAGAACAGACTCGAGTTTTGGACAGCCCGCGGAGACGGAGACAAGCCCTTGTTCCGTCAATGCAACGTTTGGCTCCATGACAAAAGGCTCAGACGGAAACACTCTCAGCTCTCGAAGGTCCTTGCAGGTTGAAGCAAGCACCTCAAGACCAGTATCCTCGATGTAGTCCAGCACCTGTGTCAATAAGTCATATCACCACAGTTAAAGATAAGGTTGCCCTTAAAGCATATTGTTGAGATACGTTACAGTAAAATGATCTAAATTATGTTAAAGTGGACTAACCCAGAGGCGTTGCAGTTTAGGACATAAGGTAATAAGCTTGACAAGATCATAGCTCTGGACAGTTGCATAACTCAGGTTCAAAGTTGTAAGCCGACCGCAAACCGAATAAACAGCTGGGAGATAGGCAGGAGCAGCATCCCAAAGGCCAGATAAGCACTTCAACTTCTTGCAACCAGAGAGGGCTACATATAAATCAGAGAACAAATCTGAACGCACATCAGCACTGTAGCCACCGGTGCCCAATTCCTCCAGCTGAGGCGCTCTTCGAAGCAAAGTAGCCAATTTTTCAAGAGGAACAGCTCGGTTAAGCTTGAGAGACTTGAGATTGGGACACCTACTCACCAGCCTCTCCAGAGCAGAGAAACATACATCAGAGGCTAAGCAAGAGATGTTGAGTGATACCAGGGAAGTGTATGTATCAGGGAAATGGCTTAGCCAGTGTCCGCTAACGTCGTCAACATCACTCTCACGCAAATCAAGCTCTTTCAGATTCCTACATAAGAATCATACTCCCTCATTTTCATAAAATTACATATTCTAAAAAAAAAAAATCTATTTTTATTTTTTGTATTTTTAATACATGTTTTATTAACTAATTACAAACTTCAAAAAACTTAATTAGTCTTACTGAATTTTTATTGGTTTAAAATTATGGAAACAAATTACAAAAAATTATGCAAATTTAATATGTTTTATTAAAAATGTGAAAAGTACGAATGGAATCATATAACCGATTCAGCCATCTCCCAATCCGGAAACCACAGCATATAATATTAGTTTGGTTCCAAATATTAGCTTAGTTCCAACCGTCACTTGAACTCTTTTCAGCTGAGCTAACTAGGCCACCTCAAAAGTCTACCAATTAGAAACGAAACTAATAACTGAATCTTGCAATGCCGCCATTACAATACCTGCAAGTGGAGGCGATAGCAGCGAGGCCATCGGTGGAGAAGCCATCGCATGAAGAAAGCACCAGAACTTTAAAATTCTTAAACGACTTAGCTATAAGCTCCAAGCACTCATCACTCACCACCATCCTCTTCAGCCTAATCTCCTCCAGCCACGTGTACGCCTTCGACATCGCCTCAATCCACGGATACACGTACCCTCCCCATCCCTCCGGCACCAAATTGAAGTCAGCGAAGTGCGGTTTCCCTTTCAGCTCCACGGATCTCACTTTCGGGAACCTCCTTATCACCGTCGCGGGGCTCACGGCGTAGCAGTTCCCGATGAAGACTCTCCTCCTGCCCCACCGCTCGATCTCGTACCACGACTTGCAGACGAGGGAAACGGAGTTCCTATCCTTGTCGTGGTGGATAAAGGAGAACACGTGCTCCAGAACTTCTTCGGGAAACGAGAGGCCGATTCTCTTCTGCAT
CDS Sequence
- >Bra003518
ATGCAGAAGAGAATCGGCCTCTCGTTTCCCGAAGAAGTTCTGGAGCACGTGTTCTCCTTTATCCACCACGACAAGGATAGGAACTCCGTTTCCCTCGTCTGCAAGTCGTGGTACGAGATCGAGCGGTGGGGCAGGAGGAGAGTCTTCATCGGGAACTGCTACGCCGTGAGCCCCGCGACGGTGATAAGGAGGTTCCCGAAAGTGAGATCCGTGGAGCTGAAAGGGAAACCGCACTTCGCTGACTTCAATTTGGTGCCGGAGGGATGGGGAGGGTACGTGTATCCGTGGATTGAGGCGATGTCGAAGGCGTACACGTGGCTGGAGGAGATTAGGCTGAAGAGGATGGTGGTGAGTGATGAGTGCTTGGAGCTTATAGCTAAGTCGTTTAAGAATTTTAAAGTTCTGGTGCTTTCTTCATGCGATGGCTTCTCCACCGATGGCCTCGCTGCTATCGCCTCCACTTGCAGGAATCTGAAAGAGCTTGATTTGCGTGAGAGTGATGTTGACGACGTTAGCGGACACTGGCTAAGCCATTTCCCTGATACATACACTTCCCTGGTATCACTCAACATCTCTTGCTTAGCCTCTGATGTATGTTTCTCTGCTCTGGAGAGGCTGGTGAGTAGGTGTCCCAATCTCAAGTCTCTCAAGCTTAACCGAGCTGTTCCTCTTGAAAAATTGGCTACTTTGCTTCGAAGAGCGCCTCAGCTGGAGGAATTGGGCACCGGTGGCTACAGTGCTGATGTGCGTTCAGATTTGTTCTCTGATTTATATGTAGCCCTCTCTGGTTGCAAGAAGTTGAAGTGCTTATCTGGCCTTTGGGATGCTGCTCCTGCCTATCTCCCAGCTGTTTATTCGGTTTGCGGTCGGCTTACAACTTTGAACCTGAGTTATGCAACTGTCCAGAGCTATGATCTTGTCAAGCTTATTACCTTATGTCCTAAACTGCAACGCCTCTGGGTGCTGGACTACATCGAGGATACTGGTCTTGAGGTGCTTGCTTCAACCTGCAAGGACCTTCGAGAGCTGAGAGTGTTTCCGTCTGAGCCTTTTGTCATGGAGCCAAACGTTGCATTGACGGAACAAGGGCTTGTCTCCGTCTCCGCGGGCTGTCCAAAACTCGAGTCTGTTCTCTACTTTTGCCGCCAAATGACCAATGATGCGTTGGTAGCGATTGCTAGGAAACGTCCCAACATGACTCGCTTCCGTTTGTGCATCATTGAGCCGAAAGCCCCTGACCATCTAACACTAGAGCCACTGGATGTGGGTTTCGGAGCCATTGTAGAGCACTGCAAAGATCTCCGGCGTCTCTCCCTATCAGGGCTCTTGACCGACAAGGTTTTCGAATACATTGGGAAGTATGCAAAGAAGATGGAGATGCTATCGGTGGCGTTTGCAGGAGACAGTGACTTAGGGATGCATCATGTTTTGTCAGGGTGCGATAGCCTGAGGAAGCTAGAGATAAGGGACTGCCCGTTTGGAGACAAGGCGTTATTGGCAAATGCTTCGAAGCTGGAGACAATGCGATCTCTTTGGATGTCTTCTTGTTCCGTGAGTTTTGGAGCCTGTAAGTTATTAGGACAGAAGATGCCAAAGCTCAATGTGGAAGTCATCGATGAGCGGGGTCCACCTGACTCGAGACCAGAGAGCTGCGCTGTTGAGAGAGTGTTTATATACCGAACAGTAGCGGGTCCTCGGTTTGACATGCCTGACTTCGTCTGGAACATGGACCAACAGTCATCAATGAGTGTTTCCAGGCAAATCATCACTACTAATGTGTTATGA
Protein Sequence
- >Bra003518
MQKRIGLSFPEEVLEHVFSFIHHDKDRNSVSLVCKSWYEIERWGRRRVFIGNCYAVSPATVIRRFPKVRSVELKGKPHFADFNLVPEGWGGYVYPWIEAMSKAYTWLEEIRLKRMVVSDECLELIAKSFKNFKVLVLSSCDGFSTDGLAAIASTCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASDVCFSALERLVSRCPNLKSLKLNRAVPLEKLATLLRRAPQLEELGTGGYSADVRSDLFSDLYVALSGCKKLKCLSGLWDAAPAYLPAVYSVCGRLTTLNLSYATVQSYDLVKLITLCPKLQRLWVLDYIEDTGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSAGCPKLESVLYFCRQMTNDALVAIARKRPNMTRFRLCIIEPKAPDHLTLEPLDVGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGKYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGPPDSRPESCAVERVFIYRTVAGPRFDMPDFVWNMDQQSSMSVSRQIITTNVL