Information report for Bra001118
Gene Details
Functional Annotation
- Encodes a nuclear protein that functions in mRNA processing. Mutations in this gene cause embryo lethality and reduced transmission through the female gametophyte. Over-expression of a CLPS3:TAP protein changes the relative levels of two alternatively processed FCA transcripts. It also causes abnormal phyllotaxy and flower development, early flowering under long and short days, and increased levels of CUC1 and WUS expression.
Homologous
- Actinidia chinensis: CEY00_Acc05725
- Arabidopsis thaliana: AT3G04680
- Brassica napus: BnaA03G0295700ZS, BnaC03G0354200ZS
- Brassica oleracea: Bo3g058530
- Citrullus lanatus: Cla97C09G179810
- Glycine max: Glyma.20G242900
- Gossypium hirsutum: Gohir.A05G364100, Gohir.D04G050600
- Juglans regia: Jr01_00620, Jr10_02550
- Manihot esculenta: MANES_17G021000
- Nicotiana attenuata: A4A49_22719
- Populus trichocarpa: POPTR_017G077200v3
- Rosa chinensis: RchiOBHm_Chr2g0169161
- Vitis vinifera: VIT_14s0066g02630
Sequences
gDNA Sequence
- >Bra001118
TAATGACTCTCAAGCCATGTCAAAGATCCAGCGACCAAAAACTTGCTAGGCAATGCCCCAGGTGATGGTGCTAAATACGTTATCTTCTTCCTCAACACATCAACCTCCGTCACATACACAAACCCTGAAACATTGCTGCACACAAAGCACCACAGAGAGAGAGAGAGAGAGACACACACATCAAACAATGCAAGGACAAAAGAAAAAACGGAAACCATCAAGAACATGTTGTGATTACCTAGAGACAATCTGGTCTGGTTCTTCTGCATATGAGACAGCGAGGATAGAATGCAACAGATCCCTCTCTTCAATATTTACAGGCGTTACCCTCAACGGGTTAGAAACCGGATCAGACCCTATTGGAAGAGCTGACCTTGGAGCTTGTGGTCCACCACCAATGCGGAACACTTGCACATCACTGAAGCTAGATGTGTTGGCATAAGGAGAGAGCTCTTTAGATAGACCGTAGAAATACTCCTGAATCCTAGAGCTTCTCGCTACTTTACGGTAGTCACGGTTCCTAGCCACAACTCCACCTGACTTGTGAAGCTTCACAACGTCCACGTTACTCTTACTCTTCAGGACATCTTTAAGCATGCTGAAGAGCTTTTCTTGACCCAAGACAAGTACAACGGAGGCGTTGAATGTTTCTATTGCATGGAGAAGCAGCTGCAAAACAAACACACAGAGACAGTTATTTTTTTAAACAAAAGCTTTCAGAAGTAAACAGAACCAACGTTTACCTCATAACCGATACCATCGATCCATCCCATTGTGTTGATCACCATTCCAGCAGCTCGAGACTCAGGGTTTCCAAGAAACTGTCTCTCCAGCACTTGTGCAAGCTCCTTCACCATTGTTTTGTACAGTTCAACGTTGTTACTGAGAGAATAACGATAGACAACATTAATAACATATGACTGGGGGAGAGACATTTGAGAATCACTTACGCTGGTGTAGTGTGACCGTAGTAGTAGACGAGAGCCATATCTAGAGGAAACCCTTCAACTGGATCAAGTGGCATCTCTATAGGTGTAGCAGCAATAGAACCAGGTATTGTGATAGAGCCTTGGCCAACATCAAGGTCTACAAATGTAGGCTTCCATCCCTGTTTAGCTGCCCAACTAATAAGCATCTTTGTCAATGTGCTCTTTCCTGAATCCGTAGGCCCTACCACAATAACCCTAGGTCCCTGCACAAAGCAGATTCTATAAAAATCAAATGATATAGAAGAACAAGATCATTGAAAGAGAAGGAGTACCGTACCTGAGGAGGTTCTGAGTCAGTAGATGTGGAAGCTTTAGCAAAACGTCTCCTTGCATCTAGTATGGCGTGTACATTAACGTAGCTGACCATTGGTGTCTACAAAAAAAAAACAAGAGCTTCTTAGTAATCAATCTTTTGCTCTGAATATCTAAAGAAAGTGTGGAAAATGAAGCAAGAAACCTACCTCATCTGCTGTATAGTCTGTTTCTGTGACACCATCCATCTCAATCGTCGCTCCATACCAAGTGAAAACCTGACAAGAATCAAAAGAGCGAACTTCAACTTCTGAAGAAATAGTTACCAAAACCACATATCTCCTCATAATCTCTATAAGAACTAACTTAACGGTTATTAACTGATTCGTCATGATACAACCTAAAGCGTAAGCCTTTCATCCAAAAAAAACACAAAGACCATAAAATCTTCAACTTAACCCAACCCATGAAGGCTAGAGGAGTGAATTTTGATAGAAACTCAAACTAGTAACCAGAAGGAAACAACACACAAGAGAGAAACTTGGCAGAACCACAAATCTACTCATAGATCACCAGACGAACTAACTTAACGGTTCTAAAAACTGATTCATCATGTTACTACCTAAAGCTTAAGTCTTTCATCTCAAACAAACACCATAAAGTCTTAAACTTTACCCAACCCATGAAGGCAAGAGGATGAACTTGATAGCAACTCAAGAACACACTTGGAGATTATAAAACCATAACTAATATTATTACTACCTAAAGCTTAAGCCTTTCATCCCAAACAAAACACAAAGACCAAAAAGTATTAAACTTTACCCAAACCCATGAATGCCAAAGAGTGAACTTGATAGCAATTCAAGAACACACTTGGAGATAGAGAACCAAAACGCACCGCAAATTTGAGGCGAGGAGGGAAGGTGCGCCAGATCTCAGGAGGTAGCTCAGCGCCGAAGATCTCAGCAGTCCCGTTAACCACACGGAGTCTGAGAGGCTCGTCGGAGACTTCTATCCTGAGCTCGCTTTCTCTGTCCAGCTTCACCTGCTTCAGATTACTAGACCCACCAGGAATGGCACCACTCATAGCCGGTGGGTTCATCGACGGACCACCGTAAGCCAT
CDS Sequence
- >Bra001118
ATGGCTTACGGTGGTCCGTCGATGAACCCACCGGCTATGAGTGGTGCCATTCCTGGTGGGTCTAGTAATCTGAAGCAGGTGAAGCTGGACAGAGAAAGCGAGCTCAGGATAGAAGTCTCCGACGAGCCTCTCAGACTCCGTGTGGTTAACGGGACTGCTGAGATCTTCGGCGCTGAGCTACCTCCTGAGATCTGGCGCACCTTCCCTCCTCGCCTCAAATTTGCGGTTTTCACTTGGTATGGAGCGACGATTGAGATGGATGGTGTCACAGAAACAGACTATACAGCAGATGAGACACCAATGGTCAGCTACGTTAATGTACACGCCATACTAGATGCAAGGAGACGTTTTGCTAAAGCTTCCACATCTACTGACTCAGAACCTCCTCAGGGACCTAGGGTTATTGTGGTAGGGCCTACGGATTCAGGAAAGAGCACATTGACAAAGATGCTTATTAGTTGGGCAGCTAAACAGGGATGGAAGCCTACATTTGTAGACCTTGATGTTGGCCAAGGCTCTATCACAATACCTGGTTCTATTGCTGCTACACCTATAGAGATGCCACTTGATCCAGTTGAAGGGTTTCCTCTAGATATGGCTCTCGTCTACTACTACGGTCACACTACACCAGCTAACAACGTTGAACTGTACAAAACAATGGTGAAGGAGCTTGCACAAGTGCTGGAGAGACAGTTTCTTGGAAACCCTGAGTCTCGAGCTGCTGGAATGGTGATCAACACAATGGGATGGATCGATGGTATCGGTTATGAGCTGCTTCTCCATGCAATAGAAACATTCAACGCCTCCGTTGTACTTGTCTTGGGTCAAGAAAAGCTCTTCAGCATGCTTAAAGATGTCCTGAAGAGTAAGAGTAACGTGGACGTTGTGAAGCTTCACAAGTCAGGTGGAGTTGTGGCTAGGAACCGTGACTACCGTAAAGTAGCGAGAAGCTCTAGGATTCAGGAGTATTTCTACGGTCTATCTAAAGAGCTCTCTCCTTATGCCAACACATCTAGCTTCAGTGATGTGCAAGTGTTCCGCATTGGTGGTGGACCACAAGCTCCAAGGTCAGCTCTTCCAATAGGGTCTGATCCGGTTTCTAACCCGTTGAGGGTAACGCCTGTAAATATTGAAGAGAGGGATCTGTTGCATTCTATCCTCGCTGTCTCATATGCAGAAGAACCAGACCAGATTGTCTCTAGCAATGTTTCAGGGTTTGTGTATGTGACGGAGGTTGATGTGTTGAGGAAGAAGATAACGTATTTAGCACCATCACCTGGGGCATTGCCTAGCAAGTTTTTGGTCGCTGGATCTTTGACATGGCTTGAGAGTCATTAG
Protein Sequence
- >Bra001118
MAYGGPSMNPPAMSGAIPGGSSNLKQVKLDRESELRIEVSDEPLRLRVVNGTAEIFGAELPPEIWRTFPPRLKFAVFTWYGATIEMDGVTETDYTADETPMVSYVNVHAILDARRRFAKASTSTDSEPPQGPRVIVVGPTDSGKSTLTKMLISWAAKQGWKPTFVDLDVGQGSITIPGSIAATPIEMPLDPVEGFPLDMALVYYYGHTTPANNVELYKTMVKELAQVLERQFLGNPESRAAGMVINTMGWIDGIGYELLLHAIETFNASVVLVLGQEKLFSMLKDVLKSKSNVDVVKLHKSGGVVARNRDYRKVARSSRIQEYFYGLSKELSPYANTSSFSDVQVFRIGGGPQAPRSALPIGSDPVSNPLRVTPVNIEERDLLHSILAVSYAEEPDQIVSSNVSGFVYVTEVDVLRKKITYLAPSPGALPSKFLVAGSLTWLESH