Information report for Bra001022
Gene Details
Functional Annotation
- encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase
Homologous
- Brassica napus: BnaA03G0285300ZS, GSBRNA2T00112075001, GSBRNA2T00153604001, BnaC07G0441100ZS, GSBRNA2T00017357001, BnaA01G0417900ZS, BnaC01G0497200ZS, GSBRNA2T00057213001
- Brassica oleracea: Bol010698, Bo3g055310, Bol042028, Bo1g157570, Bol010698
Sequences
gDNA Sequence
- >Bra001022
TGGATGGATCAGGTGGTGTGGAATCGATTCTACGAAATTACAAGCTCGGGAGAGTTCTCGGTATCGGCTCCTTTGGTAAGGTAAAGAAAGCTGAGCATACTTTGACAGGACATAATGTTGCCATCAAGATCATCAGTCGTCGCAAAATCAAGAACATGGAGATGGAGGAAAAAGGTACATTTTTGTTGTAACCACATGCTAATTTAGTTGATTTTGTTTCTGTATATGACTTTGAGATTCTGTGGAAATTCACATAGTGTTGGTTCATGTTTTCTCTTTGATGCCAGTGAGGAGAGAGATCAAAATCATGAGTCTCTTTATGCATCCTCACATCATCCGTCTCTATGAGGTCATAGAGACTACCACAGATATTTATCTTGTCATGGAGTATGTGAACTCTGGTGAGCTATTTGACTATATCGTACAGAAGGGTAGACTACAGGAGGACGAGGCCAGAAAGTTTTTTCAGCAGGTGTTGTTTTTCTTTTGATCAACATGTAACTATCCAAGCCATCATCATTGTATTTGAGTTATAAAAAAAATTGAGCCATGACTTGAGACTTTGATGTAGATAATATCGGGAGTGGAGTATTGCCATCGGAATATGGTAGTTCACAGAGACCTTAAGCCTGAAAACTTGCTTTTAGAATCCAAATGCAATGTAAAGATTGCTGATTTTGGCCTGAGCAACGTTATGCGAGATGGCCATTTTTTGAAGACAAGCTGTGGAAGTCCAAACTACGCTGCTCCAGAGGTAATTTATTTAACCTTCATGTATCTGAGAGAAGCACTATATATTGAGATCAGTAAACTGTTTCAGGTCATTTCGGGTAAATTATATGCTGGCCCTGAAGTAGACGTATGGAGCTGTGGTGTGATACTCTATGCTCTTCTTTGTGGGACTCTTCCGTTCGATGATGAGAACCTTCCCCACCTTTATAAGAAGATAAAGGTACTGCAAAAACACGTTCTGTTACTTGGTTCTTTTTGTTCCTTTTCCATATATTTTTTTAGTCCATCATCTTTGAAGTAATACATAAACTTGGGTTCTTGAAGTTACATTTTTCTCTTTTCCGTTCTCCAGGGAGGGATATATACACTACCTAGCCATCTATCAGCTGGTGCAAGAGATTTGATCCCCAAGATGCTCGTGGTCGACCCCATGAAAAGAGCAACCATCGCTGAGATTCGGCAACACCATTGGTTCCAACCTCATCTTCCAAGGTATTTAGCTGTTCCTCCTCCAGATACGGCGCAGCAGGCCAAGAAGGTGAACCTAACGTATACTATTATTTTCATTAGAGATTGTCTCTATTTCAAAATAGCGTAAAAGCATTGCTTTATAGATTAATGAGGAGATTCTGCAAGAAGTTATCAATGTGGGATTTGACAGAAACCACCTCATTGAATCTCTCCGCAACCGGATTCAGAATGATGTATGTGTTTCTCTCAGCCTCCTGTCCATTTGTTATTTCTCTTTTTTGAATTGTTGTTCGACTGATGTCTAACAGGGCACTGTGACATACTATCTGATCCTGGACAACCGGTTCCGTGGCTCTGGTGGTTATCTCAGGGCCGGGTTTCAAGAGACTATGGTGCGTCTTCATTGTCCTTTTTTGACTTTAGCAAAAGGTTTTTGAAGTAGTCCTTGAATGTTAAAATTAATCAGGATGGTACTTCGCGTATGCATCCAGCAGAAAGCGTAGCTTCACACGTTAGGCTTCCAGGACTAATGGAACTCCAAGGAGCTGGCTTGAGATCTCAGTACCCTGTTGAGAGAAATTGGGCTCTTGGACTTCAGGTCTTGATATATTTTCTTTCTGAATTCAAGCATTTGAAAGTTTTTTTTAATCTGTTTAGTTTGATTGATAATTCAACCACTTGATACAAACAGTCTAGGGCTCATCCGCGTGAAATAATGACAGAGGTCCAGAAAGCCCTGCAAGAGTTGAATGTGTGTTGGAAGAAGATAGGGCCCTACAACATCAAGTGCAGATGGGTTCCTAACAACGCTGATGGAATGCTCAGTAACTCGATGCGCGATAACAGCCACTTTGGAGATGACTCCAGCATGGGCGCAGCTGTTAAGCCTCCTAATGTTGTCAAGTTTGAAACTCAGGTAAAAATATGAATGCAATGGGGTTTGCTTGCATGTCACGCTGTTTCTGATGTGTTTTAGTGTCAGTGGCCACTTGGAAGTGTTGGAATATAAATATAATTAATCTTGTTCAATCCAAATATCAAATATATGAGAATCTCTGGGGCTTTTGGTGATATGTTTGTTGTTGATGATGAAACAGTTGTATAAAACTCAGGACGGCAAGTATCTGCTGGATCTTCAGAGGGTACATGGAGCTCAGTTTTTGTTCTTGGAACTATGTGCTGCTTTTCTTACTCAGCTCCGAGTCCTCTGA
CDS Sequence
- >Bra001022
ATGGATGGATCAGGTGGTGTGGAATCGATTCTACGAAATTACAAGCTCGGGAGAGTTCTCGGTATCGGCTCCTTTGGTAAGGTAAAGAAAGCTGAGCATACTTTGACAGGACATAATGTTGCCATCAAGATCATCAGTCGTCGCAAAATCAAGAACATGGAGATGGAGGAAAAAGTGAGGAGAGAGATCAAAATCATGAGTCTCTTTATGCATCCTCACATCATCCGTCTCTATGAGGTCATAGAGACTACCACAGATATTTATCTTGTCATGGAGTATGTGAACTCTGGTGAGCTATTTGACTATATCGTACAGAAGGGTAGACTACAGGAGGACGAGGCCAGAAAGTTTTTTCAGCAGATAATATCGGGAGTGGAGTATTGCCATCGGAATATGGTAGTTCACAGAGACCTTAAGCCTGAAAACTTGCTTTTAGAATCCAAATGCAATGTAAAGATTGCTGATTTTGGCCTGAGCAACGTTATGCGAGATGGCCATTTTTTGAAGACAAGCTGTGGAAGTCCAAACTACGCTGCTCCAGAGGTCATTTCGGGTAAATTATATGCTGGCCCTGAAGTAGACGTATGGAGCTGTGGTGTGATACTCTATGCTCTTCTTTGTGGGACTCTTCCGTTCGATGATGAGAACCTTCCCCACCTTTATAAGAAGATAAAGGGAGGGATATATACACTACCTAGCCATCTATCAGCTGGTGCAAGAGATTTGATCCCCAAGATGCTCGTGGTCGACCCCATGAAAAGAGCAACCATCGCTGAGATTCGGCAACACCATTGGTTCCAACCTCATCTTCCAAGGTATTTAGCTGTTCCTCCTCCAGATACGGCGCAGCAGGCCAAGAAGATTAATGAGGAGATTCTGCAAGAAGTTATCAATGTGGGATTTGACAGAAACCACCTCATTGAATCTCTCCGCAACCGGATTCAGAATGATGGCACTGTGACATACTATCTGATCCTGGACAACCGGTTCCGTGGCTCTGGTGGTTATCTCAGGGCCGGGTTTCAAGAGACTATGGATGGTACTTCGCGTATGCATCCAGCAGAAAGCGTAGCTTCACACGTTAGGCTTCCAGGACTAATGGAACTCCAAGGAGCTGGCTTGAGATCTCAGTACCCTGTTGAGAGAAATTGGGCTCTTGGACTTCAGTCTAGGGCTCATCCGCGTGAAATAATGACAGAGGTCCAGAAAGCCCTGCAAGAGTTGAATGTGTGTTGGAAGAAGATAGGGCCCTACAACATCAAGTGCAGATGGGTTCCTAACAACGCTGATGGAATGCTCAGTAACTCGATGCGCGATAACAGCCACTTTGGAGATGACTCCAGCATGGGCGCAGCTGTTAAGCCTCCTAATGTTGTCAAGTTTGAAACTCAGTTGTATAAAACTCAGGACGGCAAGTATCTGCTGGATCTTCAGAGGGTACATGGAGCTCAGTTTTTGTTCTTGGAACTATGTGCTGCTTTTCTTACTCAGCTCCGAGTCCTCTGA
Protein Sequence
- >Bra001022
MDGSGGVESILRNYKLGRVLGIGSFGKVKKAEHTLTGHNVAIKIISRRKIKNMEMEEKVRREIKIMSLFMHPHIIRLYEVIETTTDIYLVMEYVNSGELFDYIVQKGRLQEDEARKFFQQIISGVEYCHRNMVVHRDLKPENLLLESKCNVKIADFGLSNVMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENLPHLYKKIKGGIYTLPSHLSAGARDLIPKMLVVDPMKRATIAEIRQHHWFQPHLPRYLAVPPPDTAQQAKKINEEILQEVINVGFDRNHLIESLRNRIQNDGTVTYYLILDNRFRGSGGYLRAGFQETMDGTSRMHPAESVASHVRLPGLMELQGAGLRSQYPVERNWALGLQSRAHPREIMTEVQKALQELNVCWKKIGPYNIKCRWVPNNADGMLSNSMRDNSHFGDDSSMGAAVKPPNVVKFETQLYKTQDGKYLLDLQRVHGAQFLFLELCAAFLTQLRVL