Information report for Bra000520
Gene Details
Functional Annotation
- Encodes a protein with similarity to DNA polymerase epsilon subunit B an essential gene that is required for DNA replication. Homozygous mutants are embryo lethal. Expressed in meristematic , rapidly dividing regions.
Homologous
- Brassica napus: BnaA03G0235100ZS, BnaC03G0277800ZS
- Brassica oleracea: Bo3g040620
- Gossypium hirsutum: Gohir.D05G004300, Gohir.A05G003900
- Juglans regia: Jr06_16760, Jr06_16770
- Manihot esculenta: MANES_03G098800
- Populus trichocarpa: POPTR_012G039300v3
- Vitis vinifera: VIT_17s0000g04830
Gene Resources
- Pfam: PF04042
Sequences
gDNA Sequence
- >Bra000520
CAGAGACCAGAGAGTTCGACTTCTTGAGTGGAAGGTCGATAAGCTACGAAGGTGCTATCAGTTGAAAAGGAGCCTGGATTGAAACATGTTGTTCCCCCAAACTTGCAAACCTTTTGCTCACTCGTGTCACCTAATACTATCTGTTTCAAAACAACAACAATCCTTTGGTTCGCTCTTCCAAACTAGGCGGAACAGAAACTATAACGGAGAAGAGGACTTAAGAGTATACCGTATGAGGAGTTGGGTAGAGTCGAAGAGAGTGATCGTAGTTCCAAATGATAGGTTGCACCATGAGAGGTAGAGGACATAGGTGGCTCTGGTGAGTTATTGTGTAGACAAGCTGAACCAAACAAAGTTTCAGATTATTCCCGGAAAACATTTAGAAGCATAAGTTGTAAGATAATGGAGAAGAGAGATGTGATTACGTGCTGAAATGGGTCATCAGTTTCTTCAGCAGAAGGGGGTATTAAGCATGAACGGCGCATCTGGTACAGAAGGTTTTTCCGGAAGAACACAATCTCCTGGTTGTAGAACTTTACTCTGCATTTAACAAATATTTAAAAAAAACTTGTGTGTACAACAACAATAAATCAAATGTTTACTCATAATTCAGAATGATCAACAACAATCGAGTGTACATAGAAATTACCTGCATGGATTGCTTGAAAATATCGCATTGGGAATAACATCTCGAAGCTCTTCGGTTAAAGAGTTTGGTAAGCCGCATCTTGGCAAGACTGTTGAGGGACCTGTCAGATATAATAAGTTGTTATTAGTCATATATCTTCCTCATGGACCCTATCTTTATTTAGAGAGTGATGGAGATGGTAGTACCTGCGTCATCAGGACCTGGAATGAATAAAAACCGACTACTTTCTTTTAGCCGTGGATGGTTTCCAATCATTCTCCCAAGTTTACCAAACTGCTTCCTGAAAATTAAATGGATACATGTCATCAGGAATATATAAGAACATACATCTCGATAACAACTGAGAAGAATGTAACTACAATGAACCCCCTTACCTAAGGCGTGGATAAGAACCAAAGGATGAATTGCATGGGTGAGAGGAAAAGTTTCCCATGAAAACAAACAGGGAAGGCACAACCTCCACACTTTCAAAACCATCAAGAACCTTTTCCAGCTTCCCGAGAACCTTCTCTACGGACAACACATTTTGGCGTTCAAGCAATGCTCTTTAATCGCAAAAGGGAGGCATTATTATCAAAAAAAATGCTAAAAAGCACAGAAGATGGTACTCAGACATACCTCTTCGTCATCCAGCCATATGTCCGACAATATGACAAATGTTTCATTTACTGCTTGTCTTTCTAGGTCTGCAAGTCTAATCTGTGATCGGAAACAAAAGAACATATTCACTATCAAATGGGAATTTTACAGCTTTATCAATCCAACCAAAAGTACAAACAAGGACTCAGGGCATACCCTGTCATCTTTAGTTAGCATGCCATGTCCGAAGAAGTCGTACCCAGAATGTGTGTTTAGTGTTTTATCCCTGTCTTCTAAAGGAGGAAATCCGCATGTAATAACCTAAACCCAAAACATGGGGGAAAAGGTCTTAAAAGAGGAGAGGAGACCACACACACGACTTCGTTTTACATTCCCACCAATATAACTAACATTTTGATGTCACGTTGACATTTGAGTAAAATTAGTATGAGTGTGCACCTTAGAATATACTTAATACATAAATCTCCCTAGTCAAAAAAACAAAGAAACTAACTCAGAATGTGAAGCTATAGATTTTACCTGAAAGATACCATTTTGCATTTCACCTTCTGCCAAAATGATAGTATTCTCAGTGAAAAACCCTGTGGTTATCTTGTACTGACTGTCAAAGAAAAGTACTCAAATAGCAATTGCTATGACTTAATAAATGTAATTAATGATATTATCAACTTTTCTAAGAAAAAAAAGGATATTGCATTGGACAAATCAATCTCAACAGAAGCAGAAAGGTCTTCCAAATAGAAATGTCCATCTTCCAACTGTGATATCACACCCATCACCCATTTCCTTCCGATTTGAACCACTAGAGACTGTATTGGAGATATCTGCTCAGAAAGAAGATGACTTTAACACCAAAAGAAACACACATATTATTATTATTATTATTTTTAAAAACCAACCTCAGAGTTGTCAAACTGAGACTTCTCAGCATCAAAAGCTGGCATAGAAAAAAGCTCAGCGCGAGAAACTCTCTGCAACAGCAACATGAACCGTTCCCTGTAAACTTCTGTTTTCGAAGAAGCCTCACCGTGAACAGGCAGACTACTCGTGTGCCTGTAATGAAAGCTAGTACTTGACCTTTAGAAACTCAACTAACTTTTTACAAAGTAGAAGAAGCTTACTCGATGAACTGCTTCTTAACAGAATCATATCGATACTTTGGGACGAGAAAGGCGTCGATGAAAGCCAAGGAAGAAGCATTGGAGGTAGGTTCCTCCGCGGCATCATTAGCTCCTAGCAAGAGATTAATCACTCCTTGAACTGATTCCGCATCCACTACTGATGAATTAACTGCATTTAAAAAAAACAAATCCCAAATTAGTATATTCGAATCGAATCAATAGAAGTAATCTGAGGAGGGGCATAGATACGATTTTCCGTCTGGAGGTGGTCGAGAAGAAGATCGATGGCTTCTCCTTCATCGTCGCCGGGGAATTGGTCGGCGAAGGCGAGAATGCTGTTGAGAGCGTCGATCTTGAGGCTGTAACCTCTGGTTTTAAATTTCTTCTGTATCTTCTTCCTCATACTACTCAT
CDS Sequence
- >Bra000520
ATGAGTAGTATGAGGAAGAAGATACAGAAGAAATTTAAAACCAGAGGTTACAGCCTCAAGATCGACGCTCTCAACAGCATTCTCGCCTTCGCCGACCAATTCCCCGGCGACGATGAAGGAGAAGCCATCGATCTTCTTCTCGACCACCTCCAGACGGAAAATCTTAATTCATCAGTAGTGGATGCGGAATCAGTTCAAGGAGTGATTAATCTCTTGCTAGGAGCTAATGATGCCGCGGAGGAACCTACCTCCAATGCTTCTTCCTTGGCTTTCATCGACGCCTTTCTCGTCCCAAAGTATCGATATGATTCTGTTAAGAAGCAGTTCATCGAGCACACGAGTAGTCTGCCTGTTCACGGTGAGGCTTCTTCGAAAACAGAAGTTTACAGGGAACGGTTCATGTTGCTGTTGCAGAGAGTTTCTCGCGCTGAGCTTTTTTCTATGCCAGCTTTTGATGCTGAGAAGTCTCAGTTTGACAACTCTGAGATATCTCCAATACAGTCTCTAGTGGTTCAAATCGGAAGGAAATGGGTGATGGGTGTGATATCACAGTTGGAAGATGGACATTTCTATTTGGAAGACCTTTCTGCTTCTGTTGAGATTGATTTTCAGTACAAGATAACCACAGGGTTTTTCACTGAGAATACTATCATTTTGGCAGAAGGTGAAATGCAAAATGGTATCTTTCAGGTTATTACATGCGGATTTCCTCCTTTAGAAGACAGGGATAAAACACTAAACACACATTCTGGGTACGACTTCTTCGGACATGGCATGCTAACTAAAGATGACAGGATTAGACTTGCAGACCTAGAAAGACAAGCAGTAAATGAAACATTTGTCATATTGTCGGACATATGGCTGGATGACGAAGAGAAGGTTCTCGGGAAGCTGGAAAAGGTTCTTGATGGTTTTGAAAGTGTGGAGGTTGTGCCTTCCCTGTTTGTTTTCATGGGAAACTTTTCCTCTCACCCATGCAATTCATCCTTTGGTTCTTATCCACGCCTTAGGAAGCAGTTTGGTAAACTTGGGAGAATGATTGGAAACCATCCACGGCTAAAAGAAAGTAGTCGGTTTTTATTCATTCCAGGTCCTGATGACGCAGGTCCCTCAACAGTCTTGCCAAGATGCGGCTTACCAAACTCTTTAACCGAAGAGCTTCGAGATGTTATTCCCAATGCGATATTTTCAAGCAATCCATGCAGAGTAAAGTTCTACAACCAGGAGATTGTGTTCTTCCGGAAAAACCTTCTGTACCAGATGCGCCGTTCATGCTTAATACCCCCTTCTGCTGAAGAAACTGATGACCCATTTCAGCACCTTGTCTACACAATAACTCACCAGAGCCACCTATGTCCTCTACCTCTCATGGTGCAACCTATCATTTGGAACTACGATCACTCTCTTCGACTCTACCCAACTCCTCATACGATAGTATTAGGTGACACGAGTGAGCAAAAGGTTTGCAAGTTTGGGGGAACAACATGTTTCAATCCAGGCTCCTTTTCAACTGATAGCACCTTCGTAGCTTATCGACCTTCCACTCAAGAAGTCGAACTCTCTGGTCTCTGA
Protein Sequence
- >Bra000520
MSSMRKKIQKKFKTRGYSLKIDALNSILAFADQFPGDDEGEAIDLLLDHLQTENLNSSVVDAESVQGVINLLLGANDAAEEPTSNASSLAFIDAFLVPKYRYDSVKKQFIEHTSSLPVHGEASSKTEVYRERFMLLLQRVSRAELFSMPAFDAEKSQFDNSEISPIQSLVVQIGRKWVMGVISQLEDGHFYLEDLSASVEIDFQYKITTGFFTENTIILAEGEMQNGIFQVITCGFPPLEDRDKTLNTHSGYDFFGHGMLTKDDRIRLADLERQAVNETFVILSDIWLDDEEKVLGKLEKVLDGFESVEVVPSLFVFMGNFSSHPCNSSFGSYPRLRKQFGKLGRMIGNHPRLKESSRFLFIPGPDDAGPSTVLPRCGLPNSLTEELRDVIPNAIFSSNPCRVKFYNQEIVFFRKNLLYQMRRSCLIPPSAEETDDPFQHLVYTITHQSHLCPLPLMVQPIIWNYDHSLRLYPTPHTIVLGDTSEQKVCKFGGTTCFNPGSFSTDSTFVAYRPSTQEVELSGL