Information report for Bo9g046570
Gene Details
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Functional Annotation
- Encodes a protein with similarity to mammalian nucleoporin Nup98.Its expression is upregulated in mutants that are NUP deficient. Nucleoportin which redundantly inhibits flowering together with Nup98a through multiple pathways including clock, photoperiod, and age pathways. Gates flowering in a CONSTANS (CO)-independent mode and bypasses the CO checkpoint in photoperiodic signaling and integrated signals from multiple pathways to directly target FLOWERING LOCUS T (FT) for flowering control.
Homologous
- Brassica napus: BnaC09G0191800ZS, BnaA09G0171700ZS, BnaA08G0288900ZS, BnaA06G0066100ZS, BnaC08G0201700ZS
- Brassica rapa: Bra018441
- Daucus carota: DCAR_023771
- Glycine max: Glyma.12G235000
- Gossypium hirsutum: Gohir.A02G094700
- Lactuca sativa: gene-LSAT_6X80720
- Manihot esculenta: MANES_01G002100
- Populus trichocarpa: POPTR_011G148800v3
- Solanum lycopersicum: Solyc04g007280.3
Gene Resources
- Pfam: PF04096
- UniProt: A0A0D3E5H3
- RefSeq: XP_013612453.1
- AlphaFoldDB: A0A0D3E5H3
- KEGG: boe:106318853
- OMA: WAENASE
- InterPro: IPR007230 , IPR036903 , IPR037665
- PANTHER: PTHR23198 , PTHR23198:SF6
- SUPFAM: SSF82215
- PROSITE: PS51434
- Gene3D: 1.10.10.2360 , 3.30.1610.10
- OrthoDB: A0A0D3E5H3
- eggNOG: KOG0845
- STRING: 109376.A0A0D3E5H3
- HOGENOM: CLU_012217_0_0_1
Sequences
gDNA Sequence
- >Bo9g046570
TAAAAATGTTCGACCTTAAACTTCCACTCCCCATTCACAGAATCATAAGACACGAACTCAGCTCCTTGTTCTTCAGCTTTCCTCTTGAGCATTTCCTTATACTTCTCCACCCTCGGGCCTTCCTTCACTTGCTTCCCGCTCTTCTTGTCCATGCATTTTATGTTGAGCAACGTTACTTCCGCTGGCTTGTTCAGTCCCTGACCAACAGGAGGTTTTTGGCTCTCGTCCATGTACACAAGCACTTCCCTGTTGCTGAACTGAACCAACTTTTCCAAGTCGAGCTTACGCACATCCGTCTCTCCTAGAAACTTAATGCTTCCGTAACCGTGTCTACCGACAACAAAGTCCCTCACTAGTCCGGTATAACCAGGATTAGCCCTTTCCTTTGCAGCTAGTTCTTGGACCCGAGGCTCTGTGAAATACTCAGCGTGATGCAGCTTTGGCAGCAATGACTCGATCTCTGCTCTACTTGGTGAACTCTTTGAGCCGTTCTTGTCGCCTCCGTGATTTTCATGTGCCACGTTAAGTTTCTCACTGGCTTTTACCGGAGGAGCATCACGAACTTCACCATTATTCTTATCTGCGGATATTATTAATAATCAAGTTAGACAATGGTTTCCAAAAAAAGTACAAACATGAATCACTCTTTTGTTACATACGCATGTATTGAATACTTACTCTCGTTGTTGGCTCCATTAGTAATAACCCCATTCGATCTCTTACCTGAAATTCACATGTAAAAACGGTCAAGTGGGTCATGTTATAAGCATTCTCGGAGTGTTCAAAAACAAAGGTAGCATAGATCTCTCACTTCTTTGCCATTTAAAACTAGTCTCCAAGCATGCAATAAATAAAGCCAATGAATGTAAAAAGCAAGCTTACCATTCTCCTGCAGAGGGGTCGTCTCATCCTTCAGCAGTGCTGCTGTTTCCTTTTTAAGTGAGCGTATTAACAAAGCTCTCGGGTTTTCCCTTGGAGTGAGAAACGCATCAGCCCTAGGTGTATTGGAGTTCTCTTCATCACTGAAGAATGGAACCTGAAACAAACATGTAGAAAGAACTTCAGTAACAAAAAATATAAAGATTTACAGTTTAATTCAAGACCAAGCCGAGATTCAGAAAACAGCAAACATACCTTTGGACTATCATCCCCAGCACGGTACTTTCTTGCAGGCAGCATGACCCGTCTTTGCAAAAGATGTCGAGAAGTCAGGAGTGGTGACACTCTGGCTGGTGCAGGTCTATCAACGACCTGAGTAGAAAGAAAATATATGTGTTCGTAACATGGAGTCTTTGCTATAAGTTGGTTTGTTCGTGTAGAAAATATATGTGTTCGTAACATGGAGTCTTTGCTATAAGTTGGTTTGTTCGTGTAGAAAATATATGTGTTCGTAACATGGAGTCTTTGCTATAAGTTGGTTTGTTCGTGTTGAAGGAAAGCACAATAAACTTACAGGCAAGCTGGAGATTCCATACTGAATCGAAGGTGAATTTCCACCTTGACCAATTGAAATCTGAGGGACAGCAGGAAGCATTCCAAATGGGCTTGCAACAGGGTTTGGCTGCGTAGCAGTGAGGTTACTTGCAGGGTTTGGTTGCGAAGCAGGCCTGTCAAAACAAAGACGAGAATGAACCGTAAATAAAATAATCTAAAAGGAGAAACAAGAGTCGAGAGAAACTGATGTACTTACACTTGCCCAAAGTTGACTGGACAAAATGACAATCCACCTGCAGCGGCTGTTTGGGTCTGACCAGAGTTGTTGAAACTAAAAGATGGTTGAGTTGGCTGAGTTGATTGCTGGAGTGTCGGACCAGAAGGCTACAACAAATAAACCAACGTTAGAAAAGTGAAAGAGACGTTGAGCTATAAAAAAAATAAAAATAAGTTACCTTTGTTTGACTTAAGGGAGCGATGCTTGTATTTAAGGAAGGAAAGCTTGTAGACATGTTTAGGAATCCAGTGGAAGGTGTACTGAAAATGCTAGGTTGGGTATTTGTGTTTTGTCCAAACCCAGTCTGCGCAAATGAGGGGCTTGAGCTAAACAGCGGAGCTGACTGACTGTTGTTAAAGTATCCACTGCTAAATGCTGGAGTTGACCCTTGTGCAGGAGCCGAACTAAACAGTGACGGAGAGGAGCCAGATGAACTGAAGACTGACGAAGAGGCCAATGAAGGAGTGCTTGATGGACCAAATGGCTGCGTTGTGGTTGCTGCAAAACCAGAGGATGGTCCAAAACCGGGTGTGGTATTTGATGAAGTTCCAAACAAGGATGGGGTAGTAGGTTGGCCAAAGGGAGACGAGAAATTTGTGTTAGTTGCTGGAGTGTTCTGGCTGAAAGGGTTTGGTGTGCTTTGAAAGGGGTTTGTTGGGTTTGCAGATGTCTGGCCGAAAGGGCTTGGGGTTGGTGCTGTCTGGCCGAAAGGGTTTGGGTTTGGGGTTATTGTGCTTTGAAAGGCGGTTGTTGGGTTTGCAGATGTCTGGCCGAAAGGACTTGGGGTTGGTGCTGTCTGGCCGAAAGGGTTTGGGTTTGGGGCTATTGTGCTTTGAAAGGCTTGTGTTGGGTTTGCAGATGTCTGGCCGAAAGGGTTTGGGTTTGCGGCTATTGTGCTTTGAAAAGCGTGTGTTGGATTTGTAGGATTGGTAGATGTCTGGCCGAAAGGGTTCGTGGGCTGAGAAGAGAACACACTAGTTTGACCCGCAGGAAGTTTTCCACCTGAAAATTGAATTAAGAAAATCAGTATATTGAAACATAAGATACAAACATCTAATATGGTACAATGGATTTGTTATATGTGTACCTTTATCTCCTCTCCGAGAATCCTCCCACCTCAGCTCCTCATGGCATTTGTCTTTGTGGACAGTCATAGCAGAAATAGACTGTAGCTTCCCAGGGCCTCCAGTTCCAGACTCTGCATCTATTGTAGATGTATATGGAATGATTCTACTACCACCTTGTTGTTGATTTCCAAAGGTTGTTGAGTTCGAAGACTGAGAACCTGCAAGACAAAACATGTGTAAGTATTATTCATAACACACCTTTTGAATAGGAATTTGCAAATCTAATTCTGTAACTGAATAATACTAGCTAAAAGAGAACCTTGAGCTCCAAAGGGAGAATGCGTAGCTGGGGAGGAGCCAAAACCAAAGGCAGGAGTGGTTGAAGCGCCAAACGCAGGAGCGGTTGAAGCGCCAAAGGCAGGAGTGGTTGAAGCACCAAAGGCAGGAGTGGTTGAAGCGCCAAACCCAGGTGTACCAAAAGCACCTCCAGAACCAAAAGCATTGTTGCCAAATGCACTGCCAGAGTTACCAAAGGCAGGAGTGGGTGACACGCCAAATGCAGGTGTGCTTGAGGCACCGAAGGCAGATGTATTGGAGGAGCCGAAGGCAGGTGTGCTTGAGGCGCCGAAGGCAGATGTATTCGTAGAGCCAAAGGCAGGGGTGGTGGAGGCACCAAAGGGTGTAGATGACCCGAAAGTGCTGTTTCCAAAAGCAGGCTGTGACTGTTGTGTGGTGCTTCCGAAAGGACTTGACTGAGGCGTTGAGAAGCCATTCTGTCCAAAGGTTGGAGTGCCTAAAATAGAAGAAAAAATACCTTATCAGACAATCAACATCAAAAGTACAGGTTAACAATGTCAGTCCTAGTGTGAGAAAGTAAGTTCCTATCAATGTTACAAGCAATAGATTATTGACAAAAAAAAAAAAAACAAGGCAATAGAAATACTTACCACCAAAAGGTGAAGGAGAATTGCCAAAGGCAGGAGCAGAAGGTGCTCCAAAGCTCGGAGTAAAGCTCCCAAACCCTTGTGATGAAGCACCGAAAGGGGAGGAAGCTTGAGCCTGACCAAACACACCGGTTGAAGTACCTCCAAACATAGAACCACCAGTCTGCGCGCCAAAAGGACTAGAAGCACCACCAAAGGGTTTTGGCGCAAAGGGATTATTACTAGACGCGTTGTTGTTCTGACCAAACACAGATTGAGTTTGGGTCCCAAAAGGACTGCTGCTGTTAGATCCCTGTCCAAAAGCTGTAAATAAAAACATTCAGCGTGTCATTACAAAAAGGCAGAAGCTAAAAACATAGTAAAGAGTTACGATGACTTACGATTAGATGCGCCAAACAT
CDS Sequence
- >Bo9g046570
ATGTTTGGCGCATCTAATCCTTTTGGACAGGGATCTAACAGCAGCAGTCCTTTTGGGACCCAAACTCAATCTGTGTTTGGTCAGAACAACAACGCGTCTAGTAATAATCCCTTTGCGCCAAAACCCTTTGGTGGTGCTTCTAGTCCTTTTGGCGCGCAGACTGGTGGTTCTATGTTTGGAGGTACTTCAACCGGTGTGTTTGGTCAGGCTCAAGCTTCCTCCCCTTTCGGTGCTTCATCACAAGGGTTTGGGAGCTTTACTCCGAGCTTTGGAGCACCTTCTGCTCCTGCCTTTGGCAATTCTCCTTCACCTTTTGGTGGCACTCCAACCTTTGGACAGAATGGCTTCTCAACGCCTCAGTCAAGTCCTTTCGGAAGCACCACACAACAGTCACAGCCTGCTTTTGGAAACAGCACTTTCGGGTCATCTACACCCTTTGGTGCCTCCACCACCCCTGCCTTTGGCTCTACGAATACATCTGCCTTCGGCGCCTCAAGCACACCTGCCTTCGGCTCCTCCAATACATCTGCCTTCGGTGCCTCAAGCACACCTGCATTTGGCGTGTCACCCACTCCTGCCTTTGGTAACTCTGGCAGTGCATTTGGCAACAATGCTTTTGGTTCTGGAGGTGCTTTTGGTACACCTGGGTTTGGCGCTTCAACCACTCCTGCCTTTGGTGCTTCAACCACTCCTGCCTTTGGCGCTTCAACCGCTCCTGCGTTTGGCGCTTCAACCACTCCTGCCTTTGGTTTTGGCTCCTCCCCAGCTACGCATTCTCCCTTTGGAGCTCAAGGTTCTCAGTCTTCGAACTCAACAACCTTTGGAAATCAACAACAAGGTGGTAGTAGAATCATTCCATATACATCTACAATAGATGCAGAGTCTGGAACTGGAGGCCCTGGGAAGCTACAGTCTATTTCTGCTATGACTGTCCACAAAGACAAATGCCATGAGGAGCTGAGGTGGGAGGATTCTCGGAGAGGAGATAAAGGTGGAAAACTTCCTGCGGGTCAAACTAGTGTGTTCTCTTCTCAGCCCACGAACCCTTTCGGCCAGACATCTACCAATCCTACAAATCCAACACACGCTTTTCAAAGCACAATAGCCGCAAACCCAAACCCTTTCGGCCAGACATCTGCAAACCCAACACAAGCCTTTCAAAGCACAATAGCCCCAAACCCAAACCCTTTCGGCCAGACAGCACCAACCCCAAGTCCTTTCGGCCAGACATCTGCAAACCCAACAACCGCCTTTCAAAGCACAATAACCCCAAACCCAAACCCTTTCGGCCAGACAGCACCAACCCCAAGCCCTTTCGGCCAGACATCTGCAAACCCAACAAACCCCTTTCAAAGCACACCAAACCCTTTCAGCCAGAACACTCCAGCAACTAACACAAATTTCTCGTCTCCCTTTGGCCAACCTACTACCCCATCCTTGTTTGGAACTTCATCAAATACCACACCCGGTTTTGGACCATCCTCTGGTTTTGCAGCAACCACAACGCAGCCATTTGGTCCATCAAGCACTCCTTCATTGGCCTCTTCGTCAGTCTTCAGTTCATCTGGCTCCTCTCCGTCACTGTTTAGTTCGGCTCCTGCACAAGGGTCAACTCCAGCATTTAGCAGTGGATACTTTAACAACAGTCAGTCAGCTCCGCTGTTTAGCTCAAGCCCCTCATTTGCGCAGACTGGGTTTGGACAAAACACAAATACCCAACCTAGCATTTTCAGTACACCTTCCACTGGATTCCTAAACATGTCTACAAGCTTTCCTTCCTTAAATACAAGCATCGCTCCCTTAAGTCAAACAAAGCCTTCTGGTCCGACACTCCAGCAATCAACTCAGCCAACTCAACCATCTTTTAGTTTCAACAACTCTGGTCAGACCCAAACAGCCGCTGCAGGTGGATTGTCATTTTGTCCAGTCAACTTTGGGCAAGTGCCTGCTTCGCAACCAAACCCTGCAAGTAACCTCACTGCTACGCAGCCAAACCCTGTTGCAAGCCCATTTGGAATGCTTCCTGCTGTCCCTCAGATTTCAATTGGTCAAGGTGGAAATTCACCTTCGATTCAGTATGGAATCTCCAGCTTGCCTGTCGTTGATAGACCTGCACCAGCCAGAGTGTCACCACTCCTGACTTCTCGACATCTTTTGCAAAGACGGGTCATGCTGCCTGCAAGAAAGTACCGTGCTGGGGATGATAGTCCAAAGGTTCCATTCTTCAGTGATGAAGAGAACTCCAATACACCTAGGGCTGATGCGTTTCTCACTCCAAGGGAAAACCCGAGAGCTTTGTTAATACGCTCACTTAAAAAGGAAACAGCAGCACTGCTGAAGGATGAGACGACCCCTCTGCAGGAGAATGGTAAGAGATCGAATGGGGTTATTACTAATGGAGCCAACAACGAGAATAAGAATAATGGTGAAGTTCGTGATGCTCCTCCGGTAAAAGCCAGTGAGAAACTTAACGTGGCACATGAAAATCACGGAGGCGACAAGAACGGCTCAAAGAGTTCACCAAGTAGAGCAGAGATCGAGTCATTGCTGCCAAAGCTGCATCACGCTGAGTATTTCACAGAGCCTCGGGTCCAAGAACTAGCTGCAAAGGAAAGGGCTAATCCTGGTTATACCGGACTAGTGAGGGACTTTGTTGTCGGTAGACACGGTTACGGAAGCATTAAGTTTCTAGGAGAGACGGATGTGCGTAAGCTCGACTTGGAAAAGTTGGTTCAGTTCAGCAACAGGGAAGTGCTTGTGTACATGGACGAGAGCCAAAAACCTCCTGTTGGTCAGGGACTGAACAAGCCAGCGGAAGTAACGTTGCTCAACATAAAATGCATGGACAAGAAGAGCGGGAAGCAAGTGAAGGAAGGCCCGAGGGTGGAGAAGTATAAGGAAATGCTCAAGAGGAAAGCTGAAGAACAAGGAGCTGAGTTCGTGTCTTATGATTCTGTGAATGGGGAGTGGAAGTTTAAGGTCGAACATTTTTAG
Protein Sequence
- >Bo9g046570
MFGASNPFGQGSNSSSPFGTQTQSVFGQNNNASSNNPFAPKPFGGASSPFGAQTGGSMFGGTSTGVFGQAQASSPFGASSQGFGSFTPSFGAPSAPAFGNSPSPFGGTPTFGQNGFSTPQSSPFGSTTQQSQPAFGNSTFGSSTPFGASTTPAFGSTNTSAFGASSTPAFGSSNTSAFGASSTPAFGVSPTPAFGNSGSAFGNNAFGSGGAFGTPGFGASTTPAFGASTTPAFGASTAPAFGASTTPAFGFGSSPATHSPFGAQGSQSSNSTTFGNQQQGGSRIIPYTSTIDAESGTGGPGKLQSISAMTVHKDKCHEELRWEDSRRGDKGGKLPAGQTSVFSSQPTNPFGQTSTNPTNPTHAFQSTIAANPNPFGQTSANPTQAFQSTIAPNPNPFGQTAPTPSPFGQTSANPTTAFQSTITPNPNPFGQTAPTPSPFGQTSANPTNPFQSTPNPFSQNTPATNTNFSSPFGQPTTPSLFGTSSNTTPGFGPSSGFAATTTQPFGPSSTPSLASSSVFSSSGSSPSLFSSAPAQGSTPAFSSGYFNNSQSAPLFSSSPSFAQTGFGQNTNTQPSIFSTPSTGFLNMSTSFPSLNTSIAPLSQTKPSGPTLQQSTQPTQPSFSFNNSGQTQTAAAGGLSFCPVNFGQVPASQPNPASNLTATQPNPVASPFGMLPAVPQISIGQGGNSPSIQYGISSLPVVDRPAPARVSPLLTSRHLLQRRVMLPARKYRAGDDSPKVPFFSDEENSNTPRADAFLTPRENPRALLIRSLKKETAALLKDETTPLQENGKRSNGVITNGANNENKNNGEVRDAPPVKASEKLNVAHENHGGDKNGSKSSPSRAEIESLLPKLHHAEYFTEPRVQELAAKERANPGYTGLVRDFVVGRHGYGSIKFLGETDVRKLDLEKLVQFSNREVLVYMDESQKPPVGQGLNKPAEVTLLNIKCMDKKSGKQVKEGPRVEKYKEMLKRKAEEQGAEFVSYDSVNGEWKFKVEHF