Information report for Bo9g036780
Gene Details
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Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Arabidopsis thaliana — AT1G62830
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: A0A0D3E4N7
- RefSeq: XP_013611985.1
- AlphaFoldDB: A0A0D3E4N7
- KEGG: boe:106318517
- OMA: SSRGEMF
- InterPro: IPR001613 , IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF381
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- OrthoDB: A0A0D3E4N7
- SMR: A0A0D3E4N7
- eggNOG: KOG0029
- STRING: 109376.A0A0D3E4N7
- HOGENOM: CLU_004498_5_0_1
Sequences
gDNA Sequence
- >Bo9g036780
TGGAGGAAAACCAAGAGATCCGACCCGAAAGCCCGGAAAAACCGAAGATGGCCACGGATAATTTGACCAACGCCCAAGCCTCTCCAATGAAGGAAGCCGCCACGCCCTCCAACACCGAATTAAACAGCGGCAAAATCGACAAGGACGTCGCCGCGGCGGATCTAAACCCTACACCCGCCGAGAAGTTGCAGCCGAGCGAATCCGACGAGGAGGTGGATCTCCCAAGCATCTCAGAATCCCTCGGGGAAGAAGAATCGTCCGATCTCGTAACAGAGCCACAATCCCAAAACCCTAATCCACTAGAGCCGGGACCCAGGGCAAGAAAACGACGCCGTAGGAAACGTTTCTTCACGGAGATAAACGCGAACCCAGCTTTCCCTCGTAACCGCCGCAACAGCGTCGGAAAAGAGCTCGATTCCGAAGCCATAACCGCAATGTCGGTAGGGTTCCCCGTAAACTCGCTCACAGAGGAAGAGATCGAAGCAAACGTGGTTTCAATCATCGGAGGTAAAGAGCAGGCGAACTACATCGTCGTGAGGAACCACATCATCGCCTTGTGGAGGTCCAACGTCTCGAATTGGCTTACGAGAGATCACGCTCTTGAGTCTATACGATTGGAGCATAAAACGTTGGTCGATACGGCTTACAAGTTCCTCCTTGAGCACGGTTACATCAATTTCGGTTTAGCTCCGGTTATCAAAGAGGCGAAATTGAGGTCCTTTGACGGTTTAGAGCCGCCTAATGTGGTGGTTGTGGGTGCCGGTTTAGCCGGTTTGGTGGCTGCTAGGCAGTTGTTGTCGATGGGGTTTAGGGTTTTGGTTTTGGAAGGGAGAGATAGACCGGGCGGGCGGGTTAAGACCCGGAAGATGAAAGGTGGGGATGGTGTTGAAGCAATGGCTGATGTTGGTGGGAGTGTGTTGACTGGGATCAATGGTAACCCTCTTGGTGTGTTGGCGAGGCAGCTCGGTTTGCCTCTCCATAAGGTTAGAGATATCTGCCCATTGTATCTACCTAGTGGTGACCTTGTTGACGTTGGTGTTGACTCCAAGATAGAGGCTTCGTTTAATAAGTTGCTGGATAGGGTTTGTAAGCTTAGGCAGTCGATGATAGAGGAGATCAAGTCAGTAGATGTGCCGTTAGGTGAAGCGCTCGAGACTTTTCGTTTGGTTTACGGTGTTGCTGAGGATCAGGAGGAGAGGATGCTCTTTGATTGGCATTTAGCGAATTTGGAGTATGCGAATGCGACCTTGTTAGGGAACTTGTCGATGGCGTATTGGGATCAGGATGATCCGTACGAGATGGGAGGTGATCATTGCTTCATCCCCGGTGGGAACGAGACGTTTGTGCACGCTTTGGCTGAGAATCTGCCTGTTTTTTATGGGAACGTTGTGGAGAGCATTAGGTACGGAAGCGACGGGGTTGTGGTTTACGCGGGGGATAAGGAGTTCTCCTGCGACATGGCTCTCTGCACTGTTCCGTTGGGTGTTCTGAAGAAAGGCGGCATTGGGTTTGTTCCTGAGCTTCCTGAGAAGAAGAAAGAAGCGATTCAGAGGCTCGGGTACGGACTGCTGAACAAAGTGGCGATGTTGTTTCCTTATAACTTCTGGGGGGAAGAGATTGATACGTTTGGGAGATTAACCGAAGATTCGAGCACGAGAGGAGAGTTCTTCTTGTTCTACAGCTACTCTTCTGTCTCCGGTGGTCCGTTACTTGTAGCGCTTGTAGCTGGAGACGCCGCGGAAAGGTTTGAGACGATGTCGCCTACTGATTCCGTTAAAAGGGTGTTGCAGATACTACGCGGGATTTATCACCCGAAAGGGATCGTTGTTCCTGATCCGGTTCAAGCGCTCTGTTCCAGATGGGGACAAGACAAGTTTTCGTACGGTTCTTACTCGTATGTTGCGGTGGGATCTTCCGGAGATGATTATGATATTTTAGCTGAGAGTGTTGGAGATGGAAGAGTGTTCTTTGCTGGTGAAGCGACGAACAAACAGTATCCGGCTACAATGCACGGAGCCTTCTTAAGTGGAATGAGAGAAGCGGCAAATATACTTAGAGTTGCTAGAAGAAGGGCATCAGAATCGGCTTCAAACCTTGCTAAGTGA
CDS Sequence
- >Bo9g036780
ATGGAGGAAAACCAAGAGATCCGACCCGAAAGCCCGGAAAAACCGAAGATGGCCACGGATAATTTGACCAACGCCCAAGCCTCTCCAATGAAGGAAGCCGCCACGCCCTCCAACACCGAATTAAACAGCGGCAAAATCGACAAGGACGTCGCCGCGGCGGATCTAAACCCTACACCCGCCGAGAAGTTGCAGCCGAGCGAATCCGACGAGGAGGTGGATCTCCCAAGCATCTCAGAATCCCTCGGGGAAGAAGAATCGTCCGATCTCGTAACAGAGCCACAATCCCAAAACCCTAATCCACTAGAGCCGGGACCCAGGGCAAGAAAACGACGCCGTAGGAAACGTTTCTTCACGGAGATAAACGCGAACCCAGCTTTCCCTCGTAACCGCCGCAACAGCGTCGGAAAAGAGCTCGATTCCGAAGCCATAACCGCAATGTCGGTAGGGTTCCCCGTAAACTCGCTCACAGAGGAAGAGATCGAAGCAAACGTGGTTTCAATCATCGGAGGTAAAGAGCAGGCGAACTACATCGTCGTGAGGAACCACATCATCGCCTTGTGGAGGTCCAACGTCTCGAATTGGCTTACGAGAGATCACGCTCTTGAGTCTATACGATTGGAGCATAAAACGTTGGTCGATACGGCTTACAAGTTCCTCCTTGAGCACGGTTACATCAATTTCGGTTTAGCTCCGGTTATCAAAGAGGCGAAATTGAGGTCCTTTGACGGTTTAGAGCCGCCTAATGTGGTGGTTGTGGGTGCCGGTTTAGCCGGTTTGGTGGCTGCTAGGCAGTTGTTGTCGATGGGGTTTAGGGTTTTGGTTTTGGAAGGGAGAGATAGACCGGGCGGGCGGGTTAAGACCCGGAAGATGAAAGGTGGGGATGGTGTTGAAGCAATGGCTGATGTTGGTGGGAGTGTGTTGACTGGGATCAATGGTAACCCTCTTGGTGTGTTGGCGAGGCAGCTCGGTTTGCCTCTCCATAAGGTTAGAGATATCTGCCCATTGTATCTACCTAGTGGTGACCTTGTTGACGTTGGTGTTGACTCCAAGATAGAGGCTTCGTTTAATAAGTTGCTGGATAGGGTTTGTAAGCTTAGGCAGTCGATGATAGAGGAGATCAAGTCAGTAGATGTGCCGTTAGGTGAAGCGCTCGAGACTTTTCGTTTGGTTTACGGTGTTGCTGAGGATCAGGAGGAGAGGATGCTCTTTGATTGGCATTTAGCGAATTTGGAGTATGCGAATGCGACCTTGTTAGGGAACTTGTCGATGGCGTATTGGGATCAGGATGATCCGTACGAGATGGGAGGTGATCATTGCTTCATCCCCGGTGGGAACGAGACGTTTGTGCACGCTTTGGCTGAGAATCTGCCTGTTTTTTATGGGAACGTTGTGGAGAGCATTAGGTACGGAAGCGACGGGGTTGTGGTTTACGCGGGGGATAAGGAGTTCTCCTGCGACATGGCTCTCTGCACTGTTCCGTTGGGTGTTCTGAAGAAAGGCGGCATTGGGTTTGTTCCTGAGCTTCCTGAGAAGAAGAAAGAAGCGATTCAGAGGCTCGGGTACGGACTGCTGAACAAAGTGGCGATGTTGTTTCCTTATAACTTCTGGGGGGAAGAGATTGATACGTTTGGGAGATTAACCGAAGATTCGAGCACGAGAGGAGAGTTCTTCTTGTTCTACAGCTACTCTTCTGTCTCCGGTGGTCCGTTACTTGTAGCGCTTGTAGCTGGAGACGCCGCGGAAAGGTTTGAGACGATGTCGCCTACTGATTCCGTTAAAAGGGTGTTGCAGATACTACGCGGGATTTATCACCCGAAAGGGATCGTTGTTCCTGATCCGGTTCAAGCGCTCTGTTCCAGATGGGGACAAGACAAGTTTTCGTACGGTTCTTACTCGTATGTTGCGGTGGGATCTTCCGGAGATGATTATGATATTTTAGCTGAGAGTGTTGGAGATGGAAGAGTGTTCTTTGCTGGTGAAGCGACGAACAAACAGTATCCGGCTACAATGCACGGAGCCTTCTTAAGTGGAATGAGAGAAGCGGCAAATATACTTAGAGTTGCTAGAAGAAGGGCATCAGAATCGGCTTCAAACCTTGCTAAGTGA
Protein Sequence
- >Bo9g036780
MEENQEIRPESPEKPKMATDNLTNAQASPMKEAATPSNTELNSGKIDKDVAAADLNPTPAEKLQPSESDEEVDLPSISESLGEEESSDLVTEPQSQNPNPLEPGPRARKRRRRKRFFTEINANPAFPRNRRNSVGKELDSEAITAMSVGFPVNSLTEEEIEANVVSIIGGKEQANYIVVRNHIIALWRSNVSNWLTRDHALESIRLEHKTLVDTAYKFLLEHGYINFGLAPVIKEAKLRSFDGLEPPNVVVVGAGLAGLVAARQLLSMGFRVLVLEGRDRPGGRVKTRKMKGGDGVEAMADVGGSVLTGINGNPLGVLARQLGLPLHKVRDICPLYLPSGDLVDVGVDSKIEASFNKLLDRVCKLRQSMIEEIKSVDVPLGEALETFRLVYGVAEDQEERMLFDWHLANLEYANATLLGNLSMAYWDQDDPYEMGGDHCFIPGGNETFVHALAENLPVFYGNVVESIRYGSDGVVVYAGDKEFSCDMALCTVPLGVLKKGGIGFVPELPEKKKEAIQRLGYGLLNKVAMLFPYNFWGEEIDTFGRLTEDSSTRGEFFLFYSYSSVSGGPLLVALVAGDAAERFETMSPTDSVKRVLQILRGIYHPKGIVVPDPVQALCSRWGQDKFSYGSYSYVAVGSSGDDYDILAESVGDGRVFFAGEATNKQYPATMHGAFLSGMREAANILRVARRRASESASNLAK