Information report for Bo9g012630
Gene Details
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Functional Annotation
- Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Acts as transcriptional repressor of CCA1 and LHY.
Homologous
- Brassica napus: BnaC09G0057600ZS, BnaA09G0067500ZS, BnaC07G0364800ZS, BnaA06G0329000ZS, BnaA02G0385300ZS, BnaC02G0515600ZS, BnaA04G0295200ZS, BnaC04G0011800ZS
- Brassica rapa: Bra036517, Bra009768, Bra029407
- Gossypium hirsutum: Gohir.A11G016500, Gohir.D11G016300
- Lactuca sativa: gene-LSAT_8X4341
Gene Resources
- Pfam: PF06203 PF00072
- UniProt: A0A0D3E1F9
- AlphaFoldDB: A0A0D3E1F9
- OMA: CKDAYTT
- InterPro: IPR001789 , IPR010402 , IPR011006 , IPR045279
- PANTHER: PTHR43874 , PTHR43874:SF95
- SUPFAM: SSF52172
- PROSITE: PS50110 , PS51017
- Gene3D: 3.40.50.2300
- CDD: cd17582
- eggNOG: KOG1601
- STRING: 109376.A0A0D3E1F9
- HOGENOM: CLU_015512_2_0_1
Sequences
gDNA Sequence
- >Bo9g012630
AGAGCATAAGTTTTTTTCCCTCTTTTTATCTTTCCCCCTTTCAACTATCTCTTTCTTATTCTTTCTGGAACTTCAATCTGCTTTGGTTTGACTGTGAGATGCGAGAAATGAGCGACGAAGTTGTTGAGGTGACGGTGGTGGAGAAAGCAGCTGAGGCTGTCGGAGGGAAGTCAGCGCGGCGGAGAGTGCAGAGGAAGGATGCCGCAGAGGGGGGCGATGGTTTGGTGAAGTGGGAGAGGTTTCTCCCTAAAATCGCGTTGAGAGTTTTGCTCGTAGAAGCAGACGATTCCACCAGACAGATTATTTCTGCTCTCCTCAGGAAATGCAGTTACAGAGGTCAGTTCTTATTTCACTGGCTTCTGTCTGAACCTCGACTGTTTTGTCGGAATCTATGTTGTCTGAAAATTTGTAACTGTAAAACTGATTAGAATGTAAAAGTCTTTTCCTTTTAATCGCAAGATTAGTTTATTTTTAATAAAAATGTGTTCTTTTAATCTCAGCTTAATGGTTTAATGTGGAACTGATTAGCATGTGAAAGTATTTTCCTTTTAATCTCGGATTAGTTTTTTTTTTTCCAATAAGAATGTTTCCTTTTAGTCTCAGCTTCTTAATGTATTAATGTGGTTCGTTTTGTTTACTATGTCGTGTCTTCACAGTTGCTTCTGTACCTGATGGCTTGAAAGCTTGGGAGGTGCTAAAAGGAAACCCCGAGAGCGTCGATCTGATACTCACAGAGGTTGATCTTCCTTCAATATCTGGATACGCTCTTCTTACACTTATCATGGAGCATGACATCTGCAAGAACATCCCTATCATAAGTATGTGTACATTTATATAGCTCCTGCTTTTTCCACCATTTTGAAATAATTTAATTTTTACATATATTACATAAGTTATTTTATATTTTGACTTTAATTATAAAATTAATAAAAGAAATTAAACAGATTTGTGGATTTTTTATTAATTTTATTGCTTAATTTAACAGATTTAAACTAATTTAAATCAATTTCAACTAATTTTAACCAATTTATAACGATTTAAACTGATTGAAGACATTTAAGAGTTTAAATCGATTTCAACCGATTTATAACGGTTTAAACCGATTGAAGATATATAAATCAGATTTTAAAAAAATTGTGTACAGCCTAGCGCCTGGACCGGTTTTTAGAACCATGATTTCAGCTCATTAACATGTTCTTGGATTGTTTGTTTCAGTGATGTCGACACAGGACTCGGTGAATACTGTGTACAAGTGCATGTTGAAAGGTGCTGCTGACTATCTTGTTAAGCCATTGAGAAGGAATGAGCTGAGAAATCTCTGGCAACATGTCTGGAGAAGAAGAGAAAGTGTATGTTCCATTCCAATCTTTTTTAACCTTTTTTTTGTCTCCCTGAGCAATCTATAATTGAGTTCTTGAATCTTCTTGGCAGTCACTTTCTCCTGGTAGCTTTCCACTTGATGAGAGTGTCAGCCACCAGAAACCTGAGGGTGTCAGCCACCAGAAACCTGAGGGTGCTCAGGTTAGATTCTCTTCACAAGTGTAGTTTGATTCTGTTCCTTAGTGTTTGTTTCTAAAACTTTTGTTATTGTAGAGCTCATGTACAAGACCAGAGATGGAAGGAGAGAGCGCAGACGTTGAGGATTCAACTAAAGAAGCCATTGACTTCATCGGAGCTTCGTTTACAAGAAACGGACAACACAACAGAGAAGAAAGTGTTAGGATAGAGCTTGATCTCTCCCTGAGAAGACCAAACCAATCTTCTGGAGACAAGCCCTCTCTTCATCCTTCTAGTGGCTCTGCTTTCACAAGGTATGTTCACAAGCCGCTGCAGACACAATGCTCGGTATCTCCCTTGGTTCCCAACCAGAGAAAGAATGTTGCGGCAAGTGAAGATGATAACATTGTGGTAACCAATCAATACAATTCATCTGAACCGCCACCAAGTGCTCCTAGAAGAAACGAGGCCAGCTTTTACAATAGTGCTGACTCACCTTCTTGGCCAGGACAAGGTTCTTACCCAACGCGAGTTCCCATCAAGAGTATACAGTTCACAAGTCCTAACACAACTCCTGCTTCATTGTCTCCAAGCCCTAGCTCCATTAGCCCGCATGAGTACAGTTCCATGTTTCACCCATACAACGGTAATAAACCTGAGGGTTTGCAAGAGCAGGATGTAGAGGAGAGAAGACACGTCTCTTCTGCAACCGAACATAGCACAATAGGGAACCACTGCACTACCAGCTACATTGATTATCATCATCTTCATCAGCAGCTTGTGGAGAAGAAGAATGAAGAAGGGTACTCGTCCTCTGTAGGGAAGACTCAGCAATCTCTTAGGGAAGCTGCTTTAAACAAGTTTAGGATGAAGCGCAAGGACAGGTGTTTTGATAAAAAGGTGATGTTCAAACTCATGACAACACACATAAGGGCTTTGTTAAGAGGGATGGTTCTAACGGTTTTTAAAACCTTTTGTAATGACTTCTGCATAGGTTCGTTATGAGAGCAGGAAGAAACTGGCAGAGCAACGGCCGAGAATTAAAGGGCAGTTCGTTCGTCAAGTCCAGTCCACTGAGACATCAACACAAGCAGCTCCACAATGA
CDS Sequence
- >Bo9g012630
CAGAGCATAAGTTTTTTTCCCTCTTTTTATCTTTCCCCCTTTCAACTATCTCTTTCTTATTCTTTCTGGAACTTCAATCTGCTTTGGTTTGACTGTGAGATGCGAGAAATGAGCGACGAAGTTGTTGAGGTGACGGTGGTGGAGAAAGCAGCTGAGGCTGTCGGAGGGAAGTCAGCGCGGCGGAGAGTGCAGAGGAAGGATGCCGCAGAGGGGGGCGATGGTTTGGTGAAGTGGGAGAGGTTTCTCCCTAAAATCGCGTTGAGAGTTTTGCTCGTAGAAGCAGACGATTCCACCAGACAGATTATTTCTGCTCTCCTCAGGAAATGCAGTTACAGAGTTGCTTCTGTACCTGATGGCTTGAAAGCTTGGGAGGTGCTAAAAGGAAACCCCGAGAGCGTCGATCTGATACTCACAGAGGTTGATCTTCCTTCAATATCTGGATACGCTCTTCTTACACTTATCATGGAGCATGACATCTGCAAGAACATCCCTATCATAATGATGTCGACACAGGACTCGGTGAATACTGTGTACAAGTGCATGTTGAAAGGTGCTGCTGACTATCTTGTTAAGCCATTGAGAAGGAATGAGCTGAGAAATCTCTGGCAACATGTCTGGAGAAGAAGAGAAAGTTCACTTTCTCCTGGTAGCTTTCCACTTGATGAGAGTGTCAGCCACCAGAAACCTGAGGGTGTCAGCCACCAGAAACCTGAGGGTGCTCAGAGCTCATGTACAAGACCAGAGATGGAAGGAGAGAGCGCAGACGTTGAGGATTCAACTAAAGAAGCCATTGACTTCATCGGAGCTTCGTTTACAAGAAACGGACAACACAACAGAGAAGAAAGTGTTAGGATAGAGCTTGATCTCTCCCTGAGAAGACCAAACCAATCTTCTGGAGACAAGCCCTCTCTTCATCCTTCTAGTGGCTCTGCTTTCACAAGGTATGTTCACAAGCCGCTGCAGACACAATGCTCGGTATCTCCCTTGGTTCCCAACCAGAGAAAGAATGTTGCGGCAAGTGAAGATGATAACATTGTGGTAACCAATCAATACAATTCATCTGAACCGCCACCAAGTGCTCCTAGAAGAAACGAGGCCAGCTTTTACAATAGTGCTGACTCACCTTCTTGGCCAGGACAAGGTTCTTACCCAACGCGAGTTCCCATCAAGAGTATACAGTTCACAAGTCCTAACACAACTCCTGCTTCATTGTCTCCAAGCCCTAGCTCCATTAGCCCGCATGAGTACAGTTCCATGTTTCACCCATACAACGGTAATAAACCTGAGGGTTTGCAAGAGCAGGATGTAGAGGAGAGAAGACACGTCTCTTCTGCAACCGAACATAGCACAATAGGGAACCACTGCACTACCAGCTACATTGATTATCATCATCTTCATCAGCAGCTTGTGGAGAAGAAGAATGAAGAAGGGTACTCGTCCTCTGTAGGGAAGACTCAGCAATCTCTTAGGGAAGCTGCTTTAAACAAGTTTAGGATGAAGCGCAAGGACAGGTGTTTTGATAAAAAGGTTCGTTATGAGAGCAGGAAGAAACTGGCAGAGCAACGGCCGAGAATTAAAGGGCAGTTCGTTCGTCAAGTCCAGTCCACTGAGACATCAACACAAGCAGCTCCACAATGA
Protein Sequence
- >Bo9g012630
QSISFFPSFYLSPFQLSLSYSFWNFNLLWFDCEMREMSDEVVEVTVVEKAAEAVGGKSARRRVQRKDAAEGGDGLVKWERFLPKIALRVLLVEADDSTRQIISALLRKCSYRVASVPDGLKAWEVLKGNPESVDLILTEVDLPSISGYALLTLIMEHDICKNIPIIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQHVWRRRESSLSPGSFPLDESVSHQKPEGVSHQKPEGAQSSCTRPEMEGESADVEDSTKEAIDFIGASFTRNGQHNREESVRIELDLSLRRPNQSSGDKPSLHPSSGSAFTRYVHKPLQTQCSVSPLVPNQRKNVAASEDDNIVVTNQYNSSEPPPSAPRRNEASFYNSADSPSWPGQGSYPTRVPIKSIQFTSPNTTPASLSPSPSSISPHEYSSMFHPYNGNKPEGLQEQDVEERRHVSSATEHSTIGNHCTTSYIDYHHLHQQLVEKKNEEGYSSSVGKTQQSLREAALNKFRMKRKDRCFDKKVRYESRKKLAEQRPRIKGQFVRQVQSTETSTQAAPQ