Information report for Bo9g008020
Gene Details
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Functional Annotation
- Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.
Homologous
- Brassica napus: BnaC09G0021900ZS, BnaA09G0036500ZS, BnaA06G0388000ZS, BnaC07G0299100ZS
- Brassica rapa: XP_009121430.1, Bra034246, XP_009152022.1, Bra025226
- Raphanus raphanistrum: RrC2891_p2, RrC1984_p3
Gene Resources
- Pfam: PF00010
- UniProt: A0A0D3E0E7
- RefSeq: XP_013606376.1 , XP_013606377.1
- AlphaFoldDB: A0A0D3E0E7
- KEGG: boe:106313181
- OMA: FKAPMLE
- InterPro: IPR011598 , IPR036638 , IPR051358 , IPR054502
- PANTHER: PTHR31945 , PTHR31945:SF82
- SUPFAM: SSF47459
- PROSITE: PS50888
- Gene3D: 4.10.280.10
- OrthoDB: A0A0D3E0E7
- SMR: A0A0D3E0E7
- CDD: cd04873 , cd11443
- eggNOG: ENOG502QQ2A
- STRING: 109376.A0A0D3E0E7
- HOGENOM: CLU_035660_5_0_1
Sequences
gDNA Sequence
- >Bo9g008020
CAGATCAGACCAGCATAGCCCGCTGTATCTAAAAGCACTGCTTTGATTTGATCAGGCAATATCTCATGTCCTTCTTGGCATTGCTGGTACACAAAAAGAAAAAATGTCATAGTCCCAAAATGTTTAAATTGAGAGTAAGATGATGAAGTTATTAATCTCACCTCAGCGCGGAACACATCCAAGGCAAACCCGTTGAAACAGCTGATCACAGCTTGCTGAACATCCAATCCAAGATTATCCAAGGCCTTCATGGTAGCTAGCAAAAGACCAGGTCTACGACCACAGAACATGTGAATGTTCACTGCTCTTCCTTCCCTTACTCTAACCTCAACCTGTGGATTAAAAAAAAAAAAAAAAGAGTAAATAAATGTCTAAAACTCAACCACAAGAAAAAAACAAAGTCTAAGCCTTACTCTTGCTTGTTGGCCTTTAGAGCTTGGCAACGATGAAGGACAGAGCTCTTCCTTGACATGGCAAGAAAGACTCTGCGGAGTTTGAGGCAAAGATCCAGGTGGAGTTGGAGTTGACTCAAGTTCGTTGTGAAGATCATTGATCCTTTGTAAAAGTTCCTTGAGGTAATCGATTGCATCTCCAAGTATTGATGCTCTATCCATCTACAAACCAAACCTTATCACAAACAACACAACAAAGACAAAGACAGAGAAAAAAACTATTAAAGGAGATAAAGAGAGAAGTGATTGTTTACTTTGCTGATCTTGGGGACAATTGATCTAAGCATATAAAGCCTGTCGTTAAGCTTCTTCCTTCTTCTCCTCTCAGCCATTAGATTCTTAGCAGGCAGTCCTTTCCTCTTACCTTTACCTCCTCTGTTCTGAACACTCTCGTTCAGCTCATCAGACTCATCGCTCAGCTTCCTCTCTGAGTTTCCAAACTTGGTTTCAGAGCTCTGACGCATGGCTGCACGTTTCTGGAACAGAGTAGGCTGTCCACCAGAGGATGATGCTAACACCTCTAAAGGCTTCAGAACTTTCGCAGGACTGGTGAAGCCTTGTAACTCCAAAGGAGTGAAGCCTTGTGTCAACGAACCCAACTCGAAGGCATTGTCGAAAGGGTTTGTGTCGGAAGGAGCGCTGAGGAGACAAGACTTGTTGTTAGAAGGTAAGAAGGAAGGCTGAGATGTGTCGAGGGTAAAAAGTTGAGAGGAAGAGGAATCAAGAAGAAGATTGTCGTTGGGATTGAAAAGGAAATCGCCGAGGAATCTGAAGTCTTCTTGCTGGTTCTGTAACACGTGGAGATCTTGTGGATGTTGTTGTTGTTGGTTACTGAACCAATCACTTTCAAGCATAGGCGCCTTGAAATGAGAAAGAGAAGAAGCTCCAACGTGTTCTTGATTCCCACCCCACGAAGCTTCCTCCTCTCCGCTGCTGTTTAACCATACAGCACCGCCGTTTCCGTCGAGGGCCAT
CDS Sequence
- >Bo9g008020
ATGGCCCTCGACGGAAACGGCGGTGCTGTATGGTTAAACAGCAGCGGAGAGGAGGAAGCTTCGTGGGGTGGGAATCAAGAACACGTTGGAGCTTCTTCTCTTTCTCATTTCAAGGCGCCTATGCTTGAAAGTGATTGGTTCAGTAACCAACAACAACAACATCCACAAGATCTCCACGTGTTACAGAACCAGCAAGAAGACTTCAGATTCCTCGGCGATTTCCTTTTCAATCCCAACGACAATCTTCTTCTTGATTCCTCTTCCTCTCAACTTTTTACCCTCGACACATCTCAGCCTTCCTTCTTACCTTCTAACAACAAGTCTTGTCTCCTCAGCGCTCCTTCCGACACAAACCCTTTCGACAATGCCTTCGAGTTGGGTTCGTTGACACAAGGCTTCACTCCTTTGGAGTTACAAGGCTTCACCAGTCCTGCGAAAGTTCTGAAGCCTTTAGAGGTGTTAGCATCATCCTCTGGTGGACAGCCTACTCTGTTCCAGAAACGTGCAGCCATGCGTCAGAGCTCTGAAACCAAGTTTGGAAACTCAGAGAGGAAGCTGAGCGATGAGTCTGATGAGCTGAACGAGAGTGTTCAGAACAGAGGAGGTAAAGGTAAGAGGAAAGGACTGCCTGCTAAGAATCTAATGGCTGAGAGGAGAAGAAGGAAGAAGCTTAACGACAGGCTTTATATGCTTAGATCAATTGTCCCCAAGATCAGCAAAATGGATAGAGCATCAATACTTGGAGATGCAATCGATTACCTCAAGGAACTTTTACAAAGGATCAATGATCTTCACAACGAACTTGAGTCAACTCCAACTCCACCTGGATCTTTGCCTCAAACTCCGCAGAGTCTTTCTTGCCATGTCAAGGAAGAGCTCTGTCCTTCATCGTTGCCAAGCTCTAAAGGCCAACAAGCAAGAGTTGAGGTTAGAGTAAGGGAAGGAAGAGCAGTGAACATTCACATGTTCTGTGGTCGTAGACCTGGTCTTTTGCTAGCTACCATGAAGGCCTTGGATAATCTTGGATTGGATGTTCAGCAAGCTGTGATCAGCTGTTTCAACGGGTTTGCCTTGGATGTGTTCCGCGCTGAGCAATGCCAAGAAGGACATGAGATATTGCCTGATCAAATCAAAGCAGTGCTTTTAGATACAGCGGGCTATGCTGGTCTGATCTGA
Protein Sequence
- >Bo9g008020
MALDGNGGAVWLNSSGEEEASWGGNQEHVGASSLSHFKAPMLESDWFSNQQQQHPQDLHVLQNQQEDFRFLGDFLFNPNDNLLLDSSSSQLFTLDTSQPSFLPSNNKSCLLSAPSDTNPFDNAFELGSLTQGFTPLELQGFTSPAKVLKPLEVLASSSGGQPTLFQKRAAMRQSSETKFGNSERKLSDESDELNESVQNRGGKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSIVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTPPGSLPQTPQSLSCHVKEELCPSSLPSSKGQQARVEVRVREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGHEILPDQIKAVLLDTAGYAGLI