Information report for Bo8g098290
Gene Details
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Functional Annotation
- Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation. Mutations in TIR1 block auxin stimulation of flavonoid synthesis.
Homologous
- Brassica napus: BnaC08G0417600ZS, BnaA09G0568100ZS, BnaC04G0258600ZS, BnaA04G0003900ZS, BnaA07G0222100ZS
- Brassica rapa: Bra007720, Bra003518, Bra014378
- Glycine max: Glyma.02G152800, GmTIR1A, Glyma.10G021500
- Juglans regia: Jr08_12700
- Manihot esculenta: MANES_05G067800, MANES_01G214300
- Prunus persica: PRUPE_8G253300
Gene Resources
- Pfam: PF18511 PF18791
- UniProt: A0A0D3DV78
- RefSeq: XP_013604619.1
- AlphaFoldDB: A0A0D3DV78
- KEGG: boe:106311850
- OMA: TDDCLEM
- InterPro: IPR001810 , IPR006553 , IPR032675 , IPR036047 , IPR041101 , IPR041567
- PANTHER: PTHR16134 , PTHR16134:SF115
- SUPFAM: SSF52047 , SSF81383
- Gene3D: 1.20.1280.50 , 3.80.10.10
- OrthoDB: A0A0D3DV78
- CDD: cd22159
- eggNOG: KOG1947
- STRING: 109376.A0A0D3DV78
- HOGENOM: CLU_022456_1_0_1
Sequences
gDNA Sequence
- >Bo8g098290
TATAACCCGTTAGTAGTGATGATTTGCCTGGAAAACCTCATTGCTGAGTGTTGTTGGTCCATGTTCCAGACGAAACCAGGCATGTCAAACCGAGGACCCGCCACTGTTCGGTATATGAACACTCTTTCAACAGGGCAGCTCTCGGGTCTCGAGTCAGGCGGACCCCTTTCATCGATCACTTCCACATTGAGCTTTGGCATCTTCTGTCCTAACAACTTGCAGGCTCCAAAACTCACGGGACACGAAGACATCCAAAGAGATCGCATTGTCTCCAGCTTCGAAGCATTTGCCAAAAGCGCCTTGTCTCCAAAGGGGCAGTCCCTTATCTCTAGCTTCCTCAAGCTCTCGCACCCTGACAGAACATGATGCATCCCCAAGTCACTGTCTCCTGCAAACGCCACTGAGAGCATCTCCATCTTCTTTGCATACGTCCCAATGTACTCGAAGACCTTGTCGGTCAACAGCCCCGACAGGGAGAGACGCCGGAGATCTTTGCAGTGCTCCACTATGGCTCCAAATCCCACATCCAGTGGCTCTAGAGTCAGATGGTCAGGGGCTTTCGGCTCAATGATGCACAATCGGAAGCGGGTCATGTTGGGACGGTTCCTAGCAATGGTTACCAGCGCAGCATTGGTCATTTGACGGCAGAAGTAGAGAACCGACTCTAGTTTCGGACAGCCTGCGGAGACGGAGACAAGCCCCTGTTCTGTCAACGCAACGTTTGGCTCCATCACAAAAGGCTCGGACGGAAACACCCTCAGCTCTCGAAGGTCCTTGCAGGTTAGAGCAAGCATTTCAAGACCATCATCCTCGATGTAGTCCAACACCTGTGTCAATGAGCCATAATACCAATTAAATAAAACGTTGACACTGAAGCATATATTTGAGATACGTTACAATAAATTATTCAGGGTATTTGCACATTATGGTAAAACTAGACTCACCCAGAGGCGCTGCAATTTAGGACATTGACTAAGAAGCTTGACAAGATCATAGCTCTGGACTGTTGCATAACTCAGGTTCAAAGTTGTAAGTCCACTGCAAACCGAATAAACTGCAGGAAGATACGCAGGAAGAGCATCCCAAAACCCAGATAACCACTTCAGTTTCTTGCACCCAGAGATAGCTACAGACAAACCAGAGAGCACATCCGGACGCACTTCAGCACTGTACACACCGGTGCCAAATTCCTCCAGCTGAGGAGCTCTTTGAAGTAGAGTAGCCAGCTTCTCAAGAGGAACAGCTCGGTTAAGCTTAAGTGATTTGAGGTTGGGAGACCTACACACCAGCCTTTCCAGAGCAGAGAAACTGACCTCGGAGACTAAGCATGAGATATTGAGCGATACCAAAGAAGTGTATGAATCAGGGAAGTGGCTAAGCCAGTGCCCGCTAACGTCGTCGACATCACTCTCACGCAAATCAAGCTCTTTCAGATTCCTGCGTAAGAATCATATAATTAGAATTGAAATAACCGACTTGCCCACGTCATCAAACCTAGATTAGAACAAGACACATTGCAAAGGCCCCCCAATAAAGCTTAAAAATACATAGAAACATTAAAATTAAGCAATTAACTGCATATGCATATGCATATGAATTATATTTGAAGTAAACAGTTTCAAAATTACAATTTTATACAATGTATAAACTACTAGTTTTATCCACAAAGACGAAGCAGTATGATAAATGTTAAAGGGGAGCAAAGCAGGGGAATCAGAAACAGAATAAGTTGTTGCCCATTAACTAACTTAAAAAAGAAAAGAAAAAAAGGAACAAAGAGATACAATTGACCCCAAAAAAGGAAAAAGAATCTACCTGACCATGATTTCAAAAACAGCTATCACAATTATAGCTATTGTGATAAAAGCAATACAATAAAATTAGTTACTAATCGCAATCAGGGGGGGATACCTGCAAGTGGAAGCGATAGCAGCGAGCCCATCCGTGGAGAATCCATCGCACGAGGAAAGCACGAGCACCTTAAAATTCTTAAACGACTTGGCTATAAGCTCCAAGCACTCGTCGCTCACCACCATCCTCTTCAGCCTTATCTCCTCCAGCCACGCGTACGACGCCGACATCGCCTCTATCCACGGGTACACGTACCCTCCCCACCCCTCCGGCACCAGATTGAAGTCCGCGAAGTGCGGCTTCCCCTTCAGCTCCACGGATCTCGCCCTCGGGAACCTCCGTATCACCGCCGCCGGGCTCACGGCGTAGCAGTTCCCGATGAAGACTCTCCTCCTGCACCACCGCTCGATCTCGTACCACGACTTGCACACCAGAGACACCGAGTTCCTGTCCTTGTCCACGTGGACTAAGGAGAACACGTGCTCCAGAACTTCCTCGGGAAACGATAAGGCCGCTCGCTTATACAT
CDS Sequence
- >Bo8g098290
ATGTATAAGCGAGCGGCCTTATCGTTTCCCGAGGAAGTTCTGGAGCACGTGTTCTCCTTAGTCCACGTGGACAAGGACAGGAACTCGGTGTCTCTGGTGTGCAAGTCGTGGTACGAGATCGAGCGGTGGTGCAGGAGGAGAGTCTTCATCGGGAACTGCTACGCCGTGAGCCCGGCGGCGGTGATACGGAGGTTCCCGAGGGCGAGATCCGTGGAGCTGAAGGGGAAGCCGCACTTCGCGGACTTCAATCTGGTGCCGGAGGGGTGGGGAGGGTACGTGTACCCGTGGATAGAGGCGATGTCGGCGTCGTACGCGTGGCTGGAGGAGATAAGGCTGAAGAGGATGGTGGTGAGCGACGAGTGCTTGGAGCTTATAGCCAAGTCGTTTAAGAATTTTAAGGTGCTCGTGCTTTCCTCGTGCGATGGATTCTCCACGGATGGGCTCGCTGCTATCGCTTCCACTTGCAGGAATCTGAAAGAGCTTGATTTGCGTGAGAGTGATGTCGACGACGTTAGCGGGCACTGGCTTAGCCACTTCCCTGATTCATACACTTCTTTGGTATCGCTCAATATCTCATGCTTAGTCTCCGAGGTCAGTTTCTCTGCTCTGGAAAGGCTGGTGTGTAGGTCTCCCAACCTCAAATCACTTAAGCTTAACCGAGCTGTTCCTCTTGAGAAGCTGGCTACTCTACTTCAAAGAGCTCCTCAGCTGGAGGAATTTGGCACCGGTGTGTACAGTGCTGAAGTGCGTCCGGATGTGCTCTCTGGTTTGTCTGTAGCTATCTCTGGGTGCAAGAAACTGAAGTGGTTATCTGGGTTTTGGGATGCTCTTCCTGCGTATCTTCCTGCAGTTTATTCGGTTTGCAGTGGACTTACAACTTTGAACCTGAGTTATGCAACAGTCCAGAGCTATGATCTTGTCAAGCTTCTTAGTCAATGTCCTAAATTGCAGCGCCTCTGGGTGTTGGACTACATCGAGGATGATGGTCTTGAAATGCTTGCTCTAACCTGCAAGGACCTTCGAGAGCTGAGGGTGTTTCCGTCCGAGCCTTTTGTGATGGAGCCAAACGTTGCGTTGACAGAACAGGGGCTTGTCTCCGTCTCCGCAGGCTGTCCGAAACTAGAGTCGGTTCTCTACTTCTGCCGTCAAATGACCAATGCTGCGCTGGTAACCATTGCTAGGAACCGTCCCAACATGACCCGCTTCCGATTGTGCATCATTGAGCCGAAAGCCCCTGACCATCTGACTCTAGAGCCACTGGATGTGGGATTTGGAGCCATAGTGGAGCACTGCAAAGATCTCCGGCGTCTCTCCCTGTCGGGGCTGTTGACCGACAAGGTCTTCGAGTACATTGGGACGTATGCAAAGAAGATGGAGATGCTCTCAGTGGCGTTTGCAGGAGACAGTGACTTGGGGATGCATCATGTTCTGTCAGGGTGCGAGAGCTTGAGGAAGCTAGAGATAAGGGACTGCCCCTTTGGAGACAAGGCGCTTTTGGCAAATGCTTCGAAGCTGGAGACAATGCGATCTCTTTGGATGTCTTCGTGTCCCGTGAGTTTTGGAGCCTGCAAGTTGTTAGGACAGAAGATGCCAAAGCTCAATGTGGAAGTGATCGATGAAAGGGGTCCGCCTGACTCGAGACCCGAGAGCTGCCCTGTTGAAAGAGTGTTCATATACCGAACAGTGGCGGGTCCTCGGTTTGACATGCCTGGTTTCGTCTGGAACATGGACCAACAACACTCAGCAATGAGGTTTTCCAGGCAAATCATCACTACTAACGGGTTATAG
Protein Sequence
- >Bo8g098290
MYKRAALSFPEEVLEHVFSLVHVDKDRNSVSLVCKSWYEIERWCRRRVFIGNCYAVSPAAVIRRFPRARSVELKGKPHFADFNLVPEGWGGYVYPWIEAMSASYAWLEEIRLKRMVVSDECLELIAKSFKNFKVLVLSSCDGFSTDGLAAIASTCRNLKELDLRESDVDDVSGHWLSHFPDSYTSLVSLNISCLVSEVSFSALERLVCRSPNLKSLKLNRAVPLEKLATLLQRAPQLEEFGTGVYSAEVRPDVLSGLSVAISGCKKLKWLSGFWDALPAYLPAVYSVCSGLTTLNLSYATVQSYDLVKLLSQCPKLQRLWVLDYIEDDGLEMLALTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSAGCPKLESVLYFCRQMTNAALVTIARNRPNMTRFRLCIIEPKAPDHLTLEPLDVGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCESLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCPVSFGACKLLGQKMPKLNVEVIDERGPPDSRPESCPVERVFIYRTVAGPRFDMPGFVWNMDQQHSAMRFSRQIITTNGL