Information report for Bo8g093060
Gene Details
|
|
Functional Annotation
- Encodes a novel Myc-related bHLH transcription factor, which physically associated with APRR1/TOC1 and is a member of PIF3 transcription factor family. Involved in shade avoidance. Functions as negative regulator of PhyB. Protein levels are modulated by phytochrome B.
Homologous
- Arabidopsis thaliana: AT3G59060.4, AT3G59060.3, AT3G59060.2, AT3G59060.1
- Brassica napus: GSBRNA2T00155661001, BnaC08G0386200ZS, GSBRNA2T00121872001, BnaA09G0539200ZS
- Brassica rapa: XP_009116576.1, Bra007430
- Raphanus raphanistrum: RrC975_p2
Gene Resources
- Pfam: PF00010
- UniProt: A0A0D3DUA3
- RefSeq: XP_013605267.1
- AlphaFoldDB: A0A0D3DUA3
- KEGG: boe:106312330
- OMA: CQNPVLG
- InterPro: IPR011598 , IPR036638 , IPR044273 , IPR047265
- PANTHER: PTHR46807 , PTHR46807:SF7
- SUPFAM: SSF47459
- PROSITE: PS50888
- Gene3D: 4.10.280.10
- OrthoDB: A0A0D3DUA3
- SMR: A0A0D3DUA3
- CDD: cd11445
- eggNOG: ENOG502QTIX
- STRING: 109376.A0A0D3DUA3
- HOGENOM: CLU_030314_1_1_1
Sequences
gDNA Sequence
- >Bo8g093060
CAGCCAGTTTTACCCATACGAAGACTGTCGGTGGTAACCGGTGTCGACAGTTGACTTTGTTGTCCCACCTGAGACCCAAATCTCATCATGTCCATTGGTTGTTGGACTGTTTGAGTCTGCATGTAGTTTCAACATTACACATCAGATATTCAACAAGCTTTTTGAAAAATAATTAATAACAAGACTCTTCTCCTTAAAACGTTGCACTAACCTGAGTGGTTGCCGGCATCGGTGGAAACCCACCCATATACCTAGCAAGCTGCTCCGACAACATTTGGTTCTGTGCTTGCATTTGAAACTGTACGGCCGGGTTTTGACATACTAAACCGGGATGGTTATGTGCAGCGGGTCGGTTCATAACCGGAAATTGAGGCATTTGCATTTGACTCTGCATAGCCATCTGATTTATATATTGAGATGACTGTACACCGGGAAACATCATTGGAGTCGCTGCTGCTGCTGCCGCTGCCGCCATTCCACTTCCCATCCACATCACTTGGAGTTGCATTTGAAGTGTTTTTAAGTAATCAATGGCTTCATCCAAAATCGACGCTTTATCTGTCTACAAATTTAATAACATACAATCAAGGTTGGTTTTGAGATTCTGGAAGTTATAAACAATTAAGTAAAGATTTTAGTTTAATCTTCTTCTAAATAATTTAGAGACCTATGTTAATGTAAATTATATCTTCTTAAAGGGAACTTACTTTACTGCAATGAGGTATAAGTTCTTGAAGAGCTTTCATTCTCTCATTGATCCGATCTCTCCTCCTCTATAATAAACCAGGATCACAAAAAATAACAACATTTGAATGTTTTAAATAAGAATTTCACCTCGAGACTAACTGATGTTGCTATAACAAAAAATAATGAATATGCAATGTAAGAAATACATACCCTTTCTGAGAGATTATGAACTTCAGCCGCGCGGCTTCTTCGGGTAGATCCTGACCGTTGGCTAGATTTGTTACCCATGGCTTGATCATCGGTTGACATCAAACGTGCATCAGACTGAGACATGGATTCTTGATCAGTATCCATTACATGTTTTCTTTTACGGCTAATGGTTACACTTCTCCCACTTTCAGTTTCTTTGCTGCAACCGGACGAGCCACCAGACGAAGTGTCAAGTCTTTCTTCAACGTTCTTGCTTCTATCACTCACTGAAACCGGAGGATGGGTCACCTGATTATCATTCAGAGACTGGTTGCTCCCACAATGGCTCGGTCCAACGCTTACAACCGGTGGCCTAAACTTAGGAGGAGCCATGGCTTTAGCCTCCGGTTTAGCCGCCTCTTTGATAGGCAGTGGCTTCTTGGGATGATTTGGACCTTCAAGATGATCGATTGAAGAGAAGAAGTGGGAGGAGAACTCGGATTCGAAGGGGTCAACTACATCTTCAGGAGGGTATTGGATCCATGAGACAGTTTCTTGATCTCCCTGAACATTTTCATTAAGTTTTCGTATTGTTTCTTGGTTCTCAAGGTAAGTATTATTTGGTTTTCGTAGGGCTTGATTATGTTTGTGGGTTTGGACTTGGACTGATGGTTCTCTACGGACTTGGCTTTGTAAAACCACTTGACCATCTCTCCATAGTAGCTCCACTAGTTCATCTTCTGGTCTGTCCAAAAACATGAATAATCACATACATATACACAAACAATACAACTTATAATTATGATCAAAATTTTAAAAGTGAAACTGACAATTAGTAAATATATGGGTGGATGGTATGCATACCTGACTGATCTTTTATTAGAGGACATGTGAAAATTATCTTCAAAATTCCAATCAGAAAACAGTTGTTCCAT
CDS Sequence
- >Bo8g093060
ATGGAACAACTGTTTTCTGATTGGAATTTTGAAGATAATTTTCACATGTCCTCTAATAAAAGATCAGTCAGACCAGAAGATGAACTAGTGGAGCTACTATGGAGAGATGGTCAAGTGGTTTTACAAAGCCAAGTCCGTAGAGAACCATCAGTCCAAGTCCAAACCCACAAACATAATCAAGCCCTACGAAAACCAAATAATACTTACCTTGAGAACCAAGAAACAATACGAAAACTTAATGAAAATGTTCAGGGAGATCAAGAAACTGTCTCATGGATCCAATACCCTCCTGAAGATGTAGTTGACCCCTTCGAATCCGAGTTCTCCTCCCACTTCTTCTCTTCAATCGATCATCTTGAAGGTCCAAATCATCCCAAGAAGCCACTGCCTATCAAAGAGGCGGCTAAACCGGAGGCTAAAGCCATGGCTCCTCCTAAGTTTAGGCCACCGGTTGTAAGCGTTGGACCGAGCCATTGTGGGAGCAACCAGTCTCTGAATGATAATCAGGTGACCCATCCTCCGGTTTCAGTGAGTGATAGAAGCAAGAACGTTGAAGAAAGACTTGACACTTCGTCTGGTGGCTCGTCCGGTTGCAGCAAAGAAACTGAAAGTGGGAGAAGTGTAACCATTAGCCGTAAAAGAAAACATGTAATGGATACTGATCAAGAATCCATGTCTCAGTCTGATGCACGTTTGATGTCAACCGATGATCAAGCCATGGGTAACAAATCTAGCCAACGGTCAGGATCTACCCGAAGAAGCCGCGCGGCTGAAGTTCATAATCTCTCAGAAAGGAGGAGGAGAGATCGGATCAATGAGAGAATGAAAGCTCTTCAAGAACTTATACCTCATTGCAGTAAAACAGATAAAGCGTCGATTTTGGATGAAGCCATTGATTACTTAAAAACACTTCAAATGCAACTCCAAGTGATGTGGATGGGAAGTGGAATGGCGGCAGCGGCAGCAGCAGCAGCGACTCCAATGATGTTTCCCGGTGTACAGTCATCTCAATATATAAATCAGATGGCTATGCAGAGTCAAATGCAAATGCCTCAATTTCCGGTTATGAACCGACCCGCTGCACATAACCATCCCGGTTTAGTATGTCAAAACCCGGCCGTACAGTTTCAAATGCAAGCACAGAACCAAATGTTGTCGGAGCAGCTTGCTAGGTATATGGGTGGGTTTCCACCGATGCCGGCAACCACTCAGACTCAAACAGTCCAACAACCAATGGACATGATGAGATTTGGGTCTCAGGTGGGACAACAAAGTCAACTGTCGACACCGGTTACCACCGACAGTCTTCGTATGGGTAAAACTGGCTGA
Protein Sequence
- >Bo8g093060
MEQLFSDWNFEDNFHMSSNKRSVRPEDELVELLWRDGQVVLQSQVRREPSVQVQTHKHNQALRKPNNTYLENQETIRKLNENVQGDQETVSWIQYPPEDVVDPFESEFSSHFFSSIDHLEGPNHPKKPLPIKEAAKPEAKAMAPPKFRPPVVSVGPSHCGSNQSLNDNQVTHPPVSVSDRSKNVEERLDTSSGGSSGCSKETESGRSVTISRKRKHVMDTDQESMSQSDARLMSTDDQAMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKTLQMQLQVMWMGSGMAAAAAAAATPMMFPGVQSSQYINQMAMQSQMQMPQFPVMNRPAAHNHPGLVCQNPAVQFQMQAQNQMLSEQLARYMGGFPPMPATTQTQTVQQPMDMMRFGSQVGQQSQLSTPVTTDSLRMGKTG