Information report for Bo8g058100
Gene Details
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Functional Annotation
- Encodes a NUCLEAR FACTOR-Y C (NF-YC) homologue NF-YC9. NF-YC3., NF-YC4 and NF-YC9 redundantly modulate GA- and ABA-mediated seed germination.
Homologous
- Brassica napus: GSBRNA2T00051514001, GSBRNA2T00047202001, BnaC08G0189800ZS, BnaA08G0297000ZS, GSBRNA2T00100534001, BnaC08G0528300ZS, BnaA09G0663800ZS, BnaC05G0066900ZS, GSBRNA2T00122272001
- Brassica rapa: XP_009110865.1, XP_009110864.1, XP_009110863.1, Bra030749, XP_009118332.1, Bra031651
Gene Resources
- Pfam: PF00808
- UniProt: A0A0D3DNJ2
- AlphaFoldDB: A0A0D3DNJ2
- InterPro: IPR007125 , IPR009072 , IPR050568
- PANTHER: PTHR10252 , PTHR10252:SF115
- SUPFAM: SSF47113
- Gene3D: 1.10.20.10
- CDD: cd22908
- eggNOG: KOG1657
- STRING: 109376.A0A0D3DNJ2
- HOGENOM: CLU_795363_0_0_1
Sequences
gDNA Sequence
- >Bo8g058100
TGGATCAATTTACTCAAACCGGTAGCTTTCAAAACCTCTTAAACAGTCAACACCCAAACACCTCCTTCTCCTTTGTGACTCGTGAAGCTAGTGTAGACCTGTCTTCCTCGGATGCCTCTGTCTTCGGATCACAGTGGGCTGATGATGGAAAAGAAGATGAACTCATGGTGTCTGACCGTAAATAAAGAAGAAAGTGGTCACCAACTGAAGATATCGTTCTCATAGGTGCTTGGTTGAACACATCGAAAGATCCTGTCGTGGGTAATGAACAGAAGGCAATTGCGTTTTGGAAACGGATTGCCTCCTATGTTGCTTCAAGCCCAAAGCTCTCTGCTTTGCAAAAGAGAGAGCCTAGCCACTGTAAACAAAGGTGGGGGAAAATCAACGAGGGATGAATGAGGATGATGTTTTGAAGATGGCTCATGAGATCTTCTTTAATGACTACAAGGTCAAGTTTACACTTGAGCATGCCTGGTTGGAGATTCGCCATGATCAAAAATGGTGTGGAGCTTCTTCAACTAAAGACAAAGTAATCTCCAAAAGAAAAAAATTGGATGACCAATCAGCACACTTTTATGTATGTTTTTTTAAATCATTCTATTTAAAGAAAAAAAAAATTTAAGAACCTTTAAGAGGTTCTCCCATTCGAGGTCAAAAAATTAATTACCACTAACCTAGGTTCTTAAACTTTCAAATCATCTTATTAACTATTAAATTAATCTAAAGAACCCATAAGGGTTCCTATGGACGGAGTTGCTCACTGTTAAAGTCGAAAAAGGAGAAAAGCAAAAGCCATAAATAAAATTACAATAGATCTTCCAACTCTACACACCCGAGAGGATCTACTAGTGTTTTCCTTGGTCATCAACTTCAGGTTCTCCTTGCAAGACCAACTCCAAGGTCTCACTCTCTTTCCCTAATTTTTAGTTATTTTTTTGTTCTTGCATATATTTTGTGTAATTCATAGTGAATCCACACATATTATAAGGCGCTACAGGAAAGCTTCCACTTCTTCTGTGGTTAGAAGATACTTTGCTCTCTTTGTTTTCTAGCAAGTAGATTTTCTTTGATTATTAAGCTCAGTTTCATACTTGTTGCTGTTGTAGATCTAATTTGATAATTGTTGTCTTCTTAATAATTTTATTTTTAATTATTGCCAAAATGTTTATTGAAAAAGCTTTTAAACAATCCAAAGCGCTTTCTCTTTGTTTCTGGTATAGAGAGAATGGACCAACAAGAGCATGGACAGTCCAGAGCCATGAACTACGGCACTAACCCATACCAAACCGGGAGTGTAGGATCTACAGCACCATCAGGCCAGATGGCGTTTCACCAGCACCATCAGCAGCAACAGCTAACTCAACAGCTTCAAGTCTTTTGGCAGAACCAATTCAAAGAGATTGAGAACACAACTGATTTCAAGAACCACAGCCTTCCACTTGCATGAATCAAGAAAATCATGAAAGCTGACGAGGATGTACGCATGATCTCTGCCGAGGCACCTGTCGTGTTTGCAAGGGCCTGCGAGATGTTCATCTTGGAGCTGACACTCAGGTCCTGGAACCACACGGAGGAGAACAAGAGGAGGACGCTGCAGAAGAACGATATAGCAGCTGCTGTGACTAGAACTGACATATTTGATTTTCTTGTGGACATCGTTCCTAGGGAGGATCTCAGGGATGAGGTCTTGGGAAGTATTCCGAGAGGAACTGTCCCTGAGGCTTCTGCTGCTGGTTATCCTTATGGATACTTGCCTCCAGGAACTGGTCCAGTAAAGAACCCGGGTATGCTTATGGGTAACCCGGGTAGTGCTTACCCAAATAACCCGTATATGGGTCAACCCATGTGGTAA
CDS Sequence
- >Bo8g058100
ATGGATCAATTTACTCAAACCGGTAGCTTTCAAAACCTCTTAAACAGTCAACACCCAAACACCTCCTTCTCCTTTGTGACTCGTGAAGCTAGTGTAGACCTGTCTTCCTCGGATGCCTCTGTCTTCGGATCACAGTGGGCTGATGATGGAAAAGAAGATGAACTCATGGTGTCTGACCGTGCTTGGTTGAACACATCGAAAGATCCTGTCGTGGGTAATGAACAGAAGGCAATTGCGTTTTGGAAACGGATTGCCTCCTATGTTGCTTCAAGCCCAAAGCTCTCTGCTTTGCAAAAGAGAGAGCCTAGCCACTGTAAACAAAGGTCAAGTTTACACTTGAGCATGCCTGGTTGGAGATTCGCCATGATCAAAAATGGTGTGGAGCTTCTTCAACTAAAGACAAATGAATCCACACATATTATAAGGCGCTACAGGAAAGCTTCCACTTCTTCTGTGCTTTTAAACAATCCAAAGCGCTTTCTCTTTGTTTCTGGTATAGAGAGAATGGACCAACAAGAGCATGGACAGTCCAGAGCCATGAACTACGGCACTAACCCATACCAAACCGGGAGTGTAGGATCTACAGCACCATCAGGCCAGATGGCGTTTCACCAGCACCATCAGCAGCAACAGCTAACTCAACAGCTTCAAAAAATCATGAAAGCTGACGAGGATGTACGCATGATCTCTGCCGAGGCACCTGTCGTGTTTGCAAGGGCCTGCGAGATGTTCATCTTGGAGCTGACACTCAGGTCCTGGAACCACACGGAGGAGAACAAGAGGAGGACGCTGCAGAAGAACGATATAGCAGCTGCTGTGACTAGAACTGACATATTTGATTTTCTTGTGGACATCGTTCCTAGGGAGGATCTCAGGGATGAGGTCTTGGGAAGTATTCCGAGAGGAACTGTCCCTGAGGCTTCTGCTGCTGGTTATCCTTATGGATACTTGCCTCCAGGAACTGGTCCAGTAAAGAACCCGGGTATGCTTATGGGTAACCCGGGTAGTGCTTACCCAAATAACCCGTATATGGGTCAACCCATGTGGTAA
Protein Sequence
- >Bo8g058100
MDQFTQTGSFQNLLNSQHPNTSFSFVTREASVDLSSSDASVFGSQWADDGKEDELMVSDRAWLNTSKDPVVGNEQKAIAFWKRIASYVASSPKLSALQKREPSHCKQRSSLHLSMPGWRFAMIKNGVELLQLKTNESTHIIRRYRKASTSSVLLNNPKRFLFVSGIERMDQQEHGQSRAMNYGTNPYQTGSVGSTAPSGQMAFHQHHQQQQLTQQLQKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIPRGTVPEASAAGYPYGYLPPGTGPVKNPGMLMGNPGSAYPNNPYMGQPMW