Information report for Bo8g045980
Gene Details
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Functional Annotation
- The VERNALIZATION2 (VRN2) gene mediates vernalization and encodes a nuclear-localized zinc finger protein with similarity to Polycomb group (PcG) proteins of plants and animals. In wild-type Arabidopsis, vernalization results in the stable reduction of the levels of the floral repressor FLC. In vrn2 mutants, FLC expression is downregulated normally in response to vernalization, but instead of remaining low, FLC mRNA levels increase when plants are returned to normal temperatures. VRN2 maintains FLC repression after a cold treatment, serving as a mechanism for the cellular memory of vernalization. Required for complete repression of FLC. Required for the methylation of histone H3
Homologous
- Brassica napus: BnaC08G0146200ZS, BnaA08G0102000ZS, BnaC01G0232900ZS
- Brassica rapa: Bra021078
- Citrullus lanatus: Cla97C10G186970
- Glycine max: Glyma.01G206000, Glyma.11G036800
- Gossypium hirsutum: Gohir.D03G166700, Gohir.A03G005800
- Juglans regia: Jr09_05710
- Manihot esculenta: MANES_01G086000
- Medicago truncatula: Medtr5g013150
- Populus trichocarpa: POPTR_003G081400v3
- Prunus persica: PRUPE_5G060700
Gene Resources
- Pfam: PF09733
- UniProt: A0A0D3DMC2
- AlphaFoldDB: A0A0D3DMC2
- OMA: FAMHENG
- InterPro: IPR019135
- PANTHER: PTHR22597 , PTHR22597:SF12
- CDD: cd21553 , cd21749
- eggNOG: KOG2350 , KOG4197
- STRING: 109376.A0A0D3DMC2
- HOGENOM: CLU_047065_0_0_1
Sequences
gDNA Sequence
- >Bo8g045980
CACTTGGCTTTGCTGTTATTGACATCGTCGTCAACATCCATGGCGTTACTGTTAATGTCGATGCCAACGTCCGCACTCTTGTTCTTGTTCTTGTTCTTGTTGTCTGAGTTACTATCACAATTCTCGAGGATGATATTGCAGTTGTTGATGGTGGCCGAGTCTACAAGTCCAATGTTCCATAGTTTTATCATAAATAATCTCCAGCACCTGCTCATGTTTATGGTTTATCCCACAATCAAACACAAATACTTGTTATTGTGTATATTTACGAGATGAATTTACCAGAAGAGTGGTGAGGAATGAAGCAACTCTTCCTTGTGAAACTTGGAAAATGCTTCACATGCCCATGGTATATGACCATCCGCCACAACCCTGTAACCAAAAACTCATTAATTTTCCAAAATGTTCCATCATTCAGACATGCTACTGGTGGATATTACCAGATCAATTATTCTTATAGTTGGCATGAATGTCGCATTAAACTTGTAAGAAAAGTAGTTTACCTTTGTTTTCTTACAAAAGAGTTCCAAAGATGCATGAATCTTTTTTCGTTCTTGTTCACATCCACGAAATCATCAAGCATCTGCAGCTTTTACAAAAATATTTCATAATCCATTACCACGTTACATCAATATACCATATATTAATGAACGCAGAAAGAAATCATGGTAATACCTGGCGATCTTCCAGATCTGCAACGTCATCATCCACTTCATCTTCGCTATCTCGATCAGACATTACTTGCTCAAGTGACATTGGCTTTATCACACAAACCCATGCAGTTTTTTTTTTGGTTAGTGACAGTAAAACCGTGACAACAACATGGACATAGCATTATTAAGTATGTAAAAGAGCTTATTGAATCACCTGAACTCTGTGAGAATGATAGAACTGGCGTTTCTGAAGAAGTAGGTTGCTGGAAGAAAAATTTCTCGAGTCAATACGGAAGTAGAGTAAACACCTATTCATAATCAGGAAGAACAATTTGGAACAACATAACAAACCTTCTAGCCTCTGATCGCTCAGCAGATAACTTTCTTGACTTAGCAGCCGAGACCACAGCTTCGCTTGCTAACACAGCTTTGGCATTCGAGTCTAGCGAACATTGAGCTATGGCTGGTGAAGAATTGTTCATCCCAAATTGTGTTGCCACGGGATATCCTAAACCATGGTTTCCTGTAGAATGCCATTCATTTATGTACATAAGTCATGGTAAATATTTTGAAAAGAATCAGAGGACAAGTACATTAACTGAATAATCAAGACACAGTATACCACATGAGAAGAAGAGAGTTTACCATTACTCAGTAGGGAGGTTCCATTATCTGTGCCATTGGCTAAACTAGGTGAATCCATGGGTAAAAAGGTTACGTTTAGTCGCCTGGCGTTATTTCTACCACCTCTTTGTCTACGCTTACGAGGTTTCGAGCTGCAGAACATTATTGGTTGGGGTTAATAGAGATGTTCTGACAAGGAGTTGCTGCTATTAATGTATATACATTTAACTTATTAAGGGCTTCTGAAAGTTACCAAAAAGAGATAAGCTCATATTTCTCTTGATGGTTGACTTCTTCCTGGTACAAAGAAGGAATGAATATCAACTACAATTTCTACCAGCTCCCAAGTTAACCAAGTTTAAAGTAACTGACCTCTGATTCGAATGCATCAAGTCTTACAGAGACATTAACTGTCTGGTAATCATCTTCTGAAAGCTACAATAGGAATTTTTTTTGCTGTAACTAGAATTTCATAGCAAAACAAGAGAGTTGGAATAAAAAAAAAAAAAACATACCATGAACTCAAATTCAAACAAGTCATGAAACGAATTCAAATGAAGTTGCAGCCCCTGCGCAGACACAAGAACAATGGACTGTAAGCTCAATCTCGAACACCTTTTCTCAGATAACAAGAGCAAGAAACACAACATATGGAAACGCACACCTTGAAGCTACCACATGTCATATAGCAAAAAGGACAAGAACAATTCTCCGTAACTGCATGAAAAAATAGTAAATAAAAAAAGGAAACAGACATGGAATTACGGAAGAAGTAGAAACTAATAAAACACACACCTTCAGTTTTCTGCAATGTGTTATTACAATCCTTATAATTAAAAACTACAATCCCAGCAGATCCGGACCTAAACCAAAAAAAAAAACGAGAAGAAACCATTCATGAGTTTCCATAATTAGACCCGAGAAAAGGATTAAAGAATCAAACTTTCTTTTGCCCTTTGCTCGAATTTTGTAACTCAAGCATCTAGGAAGAAACGATGGCTGCACAAACAAAGAAACAAGTTAAGAGAATCACACTAAAAGAATGATTTAGAGAAGGAGATTGATTTACGTTGAAAAGGGAGCGAATGCGAAGAATGTTGTAGAGACGAACAGGTTTACAGTAGATCAAGAGATTCTCATCAGGTGGTGAAATCACCTCCTCCTCTTGTGACGATTTCGCGCAACAATTATGCCTACACAT
CDS Sequence
- >Bo8g045980
ATGTGTAGGCATAATTGTTGCGCGAAATCGTCACAAGAGGAGGAGGTGATTTCACCACCTGATGAGAATCTCTTGATCTACTGTAAACCTGTTCGTCTCTACAACATTCTTCGCATTCGCTCCCTTTTCAACCCATCGTTTCTTCCTAGATGCTTGAGTTACAAAATTCGAGCAAAGGGCAAAAGAAAGTCCGGATCTGCTGGGATTGTAGTTTTTAATTATAAGGATTGTAATAACACATTGCAGAAAACTGAAGTTACGGAGAATTGTTCTTGTCCTTTTTGCTATATGACATGTGGTAGCTTCAAGTCCATTGTTCTTGTGTCTGCGCAGGGGCTGCAACTTCATTTGAATTCGTTTCATGACTTGTTTGAATTTGAGTTCATGCTTTCAGAAGATGATTACCAGACAGTTAATGTCTCTGTAAGACTTGATGCATTCGAATCAGAGGAAGAAGTCAACCATCAAGAGAAATATGAGCTTATCTCTTTTTGCTCGAAACCTCGTAAGCGTAGACAAAGAGGTGGTAGAAATAACGCCAGGCGACTAAACGTAACCTTTTTACCCATGGATTCACCTAGTTTAGCCAATGGCACAGATAATGGAACCTCCCTACTGAGTAATGGAAACCATGGTTTAGGATATCCCGTGGCAACACAATTTGGGATGAACAATTCTTCACCAGCCATAGCTCAATGTTCGCTAGACTCGAATGCCAAAGCTGTGTTAGCAAGCGAAGCTGTGGTCTCGGCTGCTAAGTCAAGAAAGTTATCTGCTGAGCGATCAGAGGCTAGAAGCAACCTACTTCTTCAGAAACGCCAGTTCTATCATTCTCACAGAGTTCAGCCAATGTCACTTGAGCAAGTAATGTCTGATCGAGATAGCGAAGATGAAGTGGATGATGACGTTGCAGATCTGGAAGATCGCCAGCTGCAGATGCTTGATGATTTCGTGGATGTGAACAAGAACGAAAAAAGATTCATGCATCTTTGGAACTCTTTTGTAAGAAAACAAAGGGTTGTGGCGGATGGTCATATACCATGGGCATGTGAAGCATTTTCCAAGTTTCACAAGGAAGAGTTGCTTCATTCCTCACCACTCTTCTGGTGCTGGAGATTATTTATGATAAAACTATGGAACATTGGACTTGTAGACTCGGCCACCATCAACAACTGCAATATCATCCTCGAGAATTGTGATAGTAACTCAGACAACAAGAACAAGAACAAGAACAAGAGTGCGGACGTTGGCATCGACATTAACAGTAACGCCATGGATGTTGACGACGATGTCAATAACAGCAAAGCCAAGTGA
Protein Sequence
- >Bo8g045980
MCRHNCCAKSSQEEEVISPPDENLLIYCKPVRLYNILRIRSLFNPSFLPRCLSYKIRAKGKRKSGSAGIVVFNYKDCNNTLQKTEVTENCSCPFCYMTCGSFKSIVLVSAQGLQLHLNSFHDLFEFEFMLSEDDYQTVNVSVRLDAFESEEEVNHQEKYELISFCSKPRKRRQRGGRNNARRLNVTFLPMDSPSLANGTDNGTSLLSNGNHGLGYPVATQFGMNNSSPAIAQCSLDSNAKAVLASEAVVSAAKSRKLSAERSEARSNLLLQKRQFYHSHRVQPMSLEQVMSDRDSEDEVDDDVADLEDRQLQMLDDFVDVNKNEKRFMHLWNSFVRKQRVVADGHIPWACEAFSKFHKEELLHSSPLFWCWRLFMIKLWNIGLVDSATINNCNIILENCDSNSDNKNKNKNKSADVGIDINSNAMDVDDDVNNSKAK