Information report for Bo8g037880
Gene Details
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Functional Annotation
- Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP family of genes. Component of chromatin remodeling complexes, involved in chromatin-mediated gene regulation. Phenotype of the arp4-1 mutant allele revealed partial sterility due to defects in anther development. Targeting the distinct, 3’ UTR of AtARP4 transcripts with RNA interference caused a drastic reduction in the level of AtARP4 protein expression, and resulted in strong pleiotropic phenotypes such as altered organization of plant organs, early flowering, delayed flower senescence and high levels of sterility. Western blot analysis and immunolabelling demonstrated a clear correlation between reductions in the level of AtARP4 expression and severity of the phenotypes.
Homologous
- Actinidia chinensis: CEY00_Acc21854
- Brassica napus: BnaC08G0124900ZS, BnaC08G0245900ZS, BnaC05G0154800ZS, BnaA06G0126600ZS, BnaA01G0233500ZS, BnaC07G0200600ZS, BnaC09G0380100ZS, BnaC07G0200400ZS
- Brassica rapa: Bra033834
- Glycine max: Glyma.03G107300, Glyma.07G118800
- Medicago truncatula: Medtr8g464900
- Populus trichocarpa: POPTR_012G061300v3
- Prunus avium: Pav_sc0000095.1_g1630.1.mk
- Prunus persica: PRUPE_4G154200
- Rosa chinensis: RchiOBHm_Chr5g0028921
Gene Resources
- Pfam: PF00022
- UniProt: A0A0D3DLQ6
- AlphaFoldDB: A0A0D3DLQ6
- InterPro: IPR043129
- SUPFAM: SSF53067
- Gene3D: 3.30.420.40
- eggNOG: KOG0679
- STRING: 109376.A0A0D3DLQ6
- HOGENOM: CLU_1074968_0_0_1
Sequences
gDNA Sequence
- >Bo8g037880
CAAAACCTTGCTCCTATTTTCTTCTTGGCCTTAGCCTGTATCTTACACCGAAAGAGTAGGGGATGCACCTTAATAATCTCCCGAGCTGGTGTTCCAAGAACCTGTAAAAAACAATCAGATGGGTTCAGCTGTTTGTGCTTTTGAATTAAGAATGGATCATAAGTACACTTCATAGCCTTTAAGTTTAAGACATGTATACTTACTTCTTCTTTATAACATACAAGTTAAGGAATATAAGAACATTTTAGAAATGTCTCACCTTAAGGTTTTCTGCAGTTAGAGCTTTGTCGTCTACGGTGGTATAAGGCGATATAGGTATTATACCGACTACCACTGCTGAGATCATGCCACAATACATAAAACTTCGTTGGTGTGCACATTTGTCTGAAAATTCGGCCATCTTGCCGAGGAACTGTCAAGAACTGGCAAGTGTGCTTCTCGCGAGAGCTTCTCAGCTTCATTTAGTACCAACACTGACAGAATCAGAAAGAAACAAACGCACAGCATTACCTTGAGGACTGAAGAACAACAGTATCAGTACACGAATATGAGTTAATGAAAAGAGTGGAATGTTAACATTACCTCGAGAAAAGTCTTGCTAGAGAATCACTTCACTATCTTGAAGTCAGATTCATTACACAGCACATAGACGTTTCAAGTCAGATTCATTACACATCGCAGAGAATCTTCAAGTCATAATTTTTAAGGGAAAACAACAACAAAAAATAAATCAGAACATGTAGTTTAAAACCAAATCTGCTTTATGAGACATGCATAGAAAAATCGAAAAGAGTATAAGCAAGTGAAGAGAAGTGATTTGTACCTTGAGAATCTGCGACTCTCATGCTTCTGCCACTCCCAGGAGAGTTCTAGTCTTGAATCTAAAGAGAAACCAGAGGTGAATACTGATAAAATATAACTTGTATTAAATAATTGGAGAAAACAGTAACAACAACCCAAAAAGCTCTCAGTTAGTAAGACACGAGAGATATGGAGAGAAACAAATTAATAGGCAGCAATGGAGATTCCTCCCAGATTCACCACATTTTGAGAGTATCTCCATCCAAAGTTCAGACCTTTATGTTCAACTCTAGTTGTTAACCGTAAAAGACAGTGAATAGAGTGTAAGCAAGTGATGAGAAGTGATTCCTACCTTTAGGATCTGCAACTATCATTCTTCTTTTTCCTATTTCAAGGATCTGCAACAAAGCAAACACATCAATAGCAATCGGAAAGACACCAAAATACGAAAGAGAATCAGGTATCACCTCAGCTTCTTTTTTCCGTCGCGTCTTCTTCCTCGGCCATCTCCAACACCACTCCGCTTCTTCTTCCGTCAGTCTCCAAATCCCAATCAGAAACAATACCATCTTTGATAGGTGACAAGATCTGGTGAGTCAGAAAAAATAACTTGCAGTTAACTAATAACTTCACACATTTAATATTAAATCAAAAGAGGAAAAAGATAATAACCTCCATATGATCCTTGCGGTAATTCAAGGCTTGAGATCCCACATAGAGATTACGTTTACCCTTCTCCTTTTCAGACTTTGAATCCTTGGAATTTGAATTTGTCTTTGAAGAATCAACATCGACATCCATATCCATTGCCACTACTCCATCTACTGCCCAAACAACCTTATGAACACATGAGAAGAACCCTAAGTTAGTAACTAATATGTCTGAAGAAACAAGGGACTAAAACGCAAATATATACGAACACCAAGCTCTGGCGAAAAAAGGATTGAGCTTTACGGAAGGGAAAACACGGCCTTTGGGAGCATCTTTGCCGGTGTAGCCAGCCTTGCAAGTGTACGAATCCAAGGCAAACACTATAGCTGACACTTCATCTGTGGAACAAACCCACCATGGAAAGATTCAGACTTTATAACAAGAATATCATCAGGGAGAGGAAAAAGAAGAAATTCAAGGGTTAGAAGAGAAACCCACCTCCGCCGAACAT
CDS Sequence
- >Bo8g037880
ATGTTCGGCGGAGATGAAGTGTCAGCTATAGTGTTTGCCTTGGATTCGTACACTTGCAAGGCTGGCTACACCGGCAAAGATGCTCCCAAAGGCCGTGTTTTCCCTTCCGTTGTTTGGGCAGTAGATGGAGTAGTGGCAATGGATATGGATGTCGATGTTGATTCTTCAAAGACAAATTCAAATTCCAAGGATTCAAAGTCTGAAAAGGAGAAGGGTAAACGTAATCTCTATGTGGGATCTCAAGCCTTGAATTACCGCAAGGATCATATGGAGATGGTATTGTTTCTGATTGGGATTTGGAGACTGACGGAAGAAGAAGCGGAGTGGTGTTGGAGATGGCCGAGGAAGAAGACGCGACGGAAAAAAGAAGCTGAGATCCTTGAAATAGGAAAAAGAAGAATGATAGTTGCAGATCCTAAAGTATTCACCTCTGGTTTCTCTTTAGATTCAAGACTAGAACTCTCCTGGGAGTGGCAGAAGCATGAGAGTCGCAGATTCTCAAGTCCTCAAGGTAATGCTGTGCGTTTGTTTCTTTCTGATTCTGTCAGTGTTGACAAATGTGCACACCAACGAAGTTTTATGTATTGTGGCATGATCTCAGCAGTGGTAGTCGGTATAATACCTATATCGCCTTATACCACCGTAGACGACAAAGCTCTAACTGCAGAAAACCTTAAGGTTCTTGGAACACCAGCTCGGGAGATTATTAAGGTGCATCCCCTACTCTTTCGGTGTAAGATACAGGCTAAGGCCAAGAAGAAAATAGGAGCAAGGTTTTGA
Protein Sequence
- >Bo8g037880
MFGGDEVSAIVFALDSYTCKAGYTGKDAPKGRVFPSVVWAVDGVVAMDMDVDVDSSKTNSNSKDSKSEKEKGKRNLYVGSQALNYRKDHMEMVLFLIGIWRLTEEEAEWCWRWPRKKTRRKKEAEILEIGKRRMIVADPKVFTSGFSLDSRLELSWEWQKHESRRFSSPQGNAVRLFLSDSVSVDKCAHQRSFMYCGMISAVVVGIIPISPYTTVDDKALTAENLKVLGTPAREIIKVHPLLFRCKIQAKAKKKIGARF