Information report for Bo7g078020
Gene Details
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Functional Annotation
- Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.
Homologous
- Brassica napus: BnaC04G0609100ZS, BnaA04G0290800ZS, BnaA03G0222900ZS, BnaC03G0262000ZS, BnaC07G0264200ZS, BnaC07G0264100ZS
- Brassica rapa: Bra039296, Bra000409
- Gossypium hirsutum: Gohir.A07G141800, Gohir.A12G108600
- Manihot esculenta: MANES_01G255300, MANES_05G032800
- Populus trichocarpa: POPTR_014G086500v3
Gene Resources
- Pfam: PF00271 PF00176
- UniProt: A0A0D3D9Z3
- AlphaFoldDB: A0A0D3D9Z3
- OMA: NPLYPRH
- eggNOG: KOG0386
- STRING: 109376.A0A0D3D9Z3
- HOGENOM: CLU_495553_0_0_1
Sequences
gDNA Sequence
- >Bo7g078020
TGGATAAGAAGACGATCAGATCGCCGTTTTTCTCTTCCGTCGGCTCTTCTTCTCTCCGTGTCTGCTTGGCGGGACTTGACAGTAACAAACTCTTAAAAATTTAAGATATTTTGGTAATATGTTTCAAAATTCTAGTTATGGACCGATGGGCCTTATACAGGGTTTTTGAACTTTTGGTCTTCTTATTCTCTAGTATTGTGCATTTGGTTTGCTCTCAGATTCCTCGAAGAAAGTGCGTGCATCTGGAGGCAGTGGCGGAGGCTACGCTCGGAATCCGGGCATGGGTCCGGCTGGTCGGACCAACTCCGCATCATCCGCGGCGTCTCCGACTTCTTCTTCTTCATCCGTTCAACAGCAACAGCAGCAGCAGCTGGCGTCTAGGCATGTAAAGAGTTACTAAGATGAACTGAAAGTTGCAAAGTATGTTGGAATTGTGGATTGTGTTCGTTTAGAGGAGAAAAGTGATCTTTGTTGTTTACCAATTTTTGTCCCTTAATCTTGCTTTTATTCAGTTTAGTGGGGGGGTTTCAACTGTTTCTCAGTTCAGTAGTTGCCAATTTATTTAAATTGAAGCTGCGTAGTTAGTTGGGTAACGCTATTTGAATTCTCTATTTGCCAATATATATATGTACAAACGAATAGTTGCTCTGAATTCTCTAATAAATTATTGCAGCAGCAGCAGGTGAGAAACTCAGAGGCAAATGATGGCATGTTTTCGTATCATGCTGGTGGGGTTCAGGGGATGATGGGAGGTGGCAACTTTGGTTCTTCGTCTGGCTCTATGCAGCACCCTCAGCAACCTAGGAGATTATTTGACTCTCCTCAACCACAACCACAACAACAACAACAGGGTTCTTCCCAAGAGGGCCAGCAGAATTTTAATCCAATGCAGCAAGCGTATCTTCAGTTTGCTTTACAGGCACAGCAACAAAAAGCACAGCAGCAAGCTAGAATGGGAATGCTGGGTTCATCTAAGGATCAAGACGCACGGATGGGTATGTTGAACATGCAAGGCACGATGCCGCAGATCCAGGCATCTAATCAGGCTCAGGCCTTCTAATCCATCTGCTGAACAATTTACTCGCGGTGAAAGGCAGATGGAATCAGGTCCTCAACAAAGGAACGAGACAAAACCTCATCCTCAGCAAGTTGGAACCGGACAACTAGTGCCTGGAAATATCATTAGGCCTATGCAGGCACCACAGGGTGTCAATAATATGGGGACCAACCAACTCGCGCTTTCACAGCAGTAGCAGGTGATGCAGGCATGGGCGCGCGCGAGCGTAATATTGATCTCTTGCATCCTGCCAACGCCAGCCAAATGATGCACATACTCCAGGCAAGAATGGCTGCCCAACAGAAAGCTAACGAAGGCAGTGTGGGTTCACAGTCAGCATCCCAGTGTCTAGCCAGCCATCTTCATCTTCAGGTGTTCCAGGGGAGAACTCACCTCGTCCCAGCTCTGCTGGTGATATCTCTGGGCAGTCAGGATCAGGGAAGGCCAGACATGCAATATCTACCAGCTCATTTGCCTCGACTTCCTGTCCCAGAATGATGAACCCTGCTGCGAATCCCTTCTCCGCCCAAGGGAGAGATAATCCACTGTATCCTCGTCATTTAGTTCAGCCTACAAGTGGGATGCCCTCAGGAAATTCCATGCAGACGTCTGCAAATGAGACACATGTTTTGGATCACATTGCGTCTACAAATAAAAGTTTAGGTTCTGCTGAGCATTTGCAAATGCAGCAGCCTAGGCAGCTGAATGCACCCAGTCCAAAAGCTGCTCTATCTGACGCTGGGTTAACCTAGTAAATCTTCCCTTCAGAGTGGACGGGGGACCAAACAAGCACAGCAGCGATCAGGATTTACCAAACAACAACTCCATGTTTTCAAAGCCCAGATACTGGCATTTCGTCGTTTGAAGGTGTTTACCTTTGTCTGTTTCTTCATTTATTATTATTTATTCTGATGTATATGTTGCTGGCGATGTATCATTGACTTCATAACCTTTCTACAAATCACGTTGTTTGATTTTCTTTCCTTTTGCTTTTTAATTGGCAGAAAGGAGAAGGTTCTTTGCCTCGGGAGCTTTTTAAATCTATTGCTCCACCACCGCTTGAAGTACAGACGCAGTTCCTGTGAGAGTTCATGTTCAGGATAAATCTTCAAATAAAACTGTAGAAAACCAAGCAAGGTCACTGGAGTCTGGCAAAGAGTCTAAGACTGCTGCTTCTTCAAATGGACAGATTTTTGCTAAAGAGGCAGATAATGGTGGAGATACAGAAGTACCTTTGGCGACGGGCCACAGCCAATTATTTCAAAATCTAGAAAAAGAAGCTGCTTCTACTGATGCGGTTACGAAAGAGGAGCAACAAACTGATGCATTCCCAGTTAAGTCAGACCAAGGAGCAGATGCTAGTACTCAAGAGACTCCTAGAAGTGATTCTATTGCTGATAAGGGAAAAGCTGTTGCATCTGATGGAGGCCAATCTAATGTTCCGCTACAAGCAATCTCTCCCCAGCAGCCTAAGGATACAGCCTCTGCCAGGAAATATCATGGACCATTGTTTGATTTTCCCTTTTTCACTCAAAAACATGACACTTATGGATCTGCAACAGCCAATGCCAGTAACAATCTCACATTAGCTTATGATATCAAAGACCTGATCTGTGAAGAAGGTGCATAA
CDS Sequence
- >Bo7g078020
ATGGATAAGAAGACGATCAGATCGCCGTTTTTCTCTTCCGTCGGCTCTTCTTCTCTCCGTGTCTGCTTGGCGGGACTTGACAATTCCTCGAAGAAAGTGCGTGCATCTGGAGGCAGTGGCGGAGGCTACGCTCGGAATCCGGGCATGGGTCCGGCTGGTCGGACCAACTCCGCATCATCCGCGGCGTCTCCGACTTCTTCTTCTTCATCCGTTCAACAGCAACAGCAGCAGCAGCTGGCGTCTAGGCATCAGCAGCAGGTGAGAAACTCAGAGGCAAATGATGGCATGTTTTCGTATCATGCTGGTGGGGTTCAGGGGATGATGGGAGGTGGCAACTTTGGTTCTTCGTCTGGCTCTATGCAGCACCCTCAGCAACCTAGGAGATTATTTGACTCTCCTCAACCACAACCACAACAACAACAACAGGGTTCTTCCCAAGAGGGCCAGCAGAATTTTAATCCAATGCAGCAAGCGTATCTTCAGTTTGCTTTACAGGCACAGCAACAAAAAGCACAGCAGCAAGCTAGAATGGGAATGCTGGGTTCATCTAAGGATCAAGACGCACGGATGGGTCCTCAACAAAGGAACGAGACAAAACCTCATCCTCAGCAAGTTGGAACCGGACAACTAGTGCCTGGAAATATCATTAGGCCTATGCAGGCACCACAGGTCAGCATCCCAGTGTCTAGCCAGCCATCTTCATCTTCAGGTGTTCCAGGGGAGAACTCACCTCGTCCCAGCTCTGCTGGTGATATCTCTGGGCAGTCAGGATCAGGGAAGGCCAGACATGCAATATCTACCAGCTCATTTGCCTCGACTTCCTGTCCCAGAATGATGAACCCTGCTGCGAATCCCTTCTCCGCCCAAGGGAGAGATAATCCACTGTATCCTCGTCATTTAGTTCAGCCTACAAGTGGGATGCCCTCAGGAAATTCCATGCAGACGTCTGCAAATGAGACACATGTTTTGGATCACATTGCGTCTACAAATAAAAGTTTAGGTTCTGCTGAGCATTTGCAAATGCAGCAGCCTAGGCAGCTGAATGCACCCAGTCCAAAAGCTGCTCTATCTGACGCTGGGTTAACCTATACAGACGCAGTTCCTGTGAGAGTTCATGTTCAGGATAAATCTTCAAATAAAACTGTAGAAAACCAAGCAAGGTCACTGGAGTCTGGCAAAGAGTCTAAGACTGCTGCTTCTTCAAATGGACAGATTTTTGCTAAAGAGGCAGATAATGGTGGAGATACAGAAGTACCTTTGGCGACGGGCCACAGCCAATTATTTCAAAATCTAGAAAAAGAAGCTGCTTCTACTGATGCGGTTACGAAAGAGGAGCAACAAACTGATGCATTCCCAGTTAAGTCAGACCAAGGAGCAGATGCTAGTACTCAAGAGACTCCTAGAAGTGATTCTATTGCTGATAAGGGAAAAGCTGTTGCATCTGATGGAGGCCAATCTAATGTTCCGCTACAAGCAATCTCTCCCCAGCAGCCTAAGGATACAGCCTCTGCCAGGAAATATCATGGACCATTGTTTGATTTTCCCTTTTTCACTCAAAAACATGACACTTATGGATCTGCAACAGCCAATGCCAGTAACAATCTCACATTAGCTTATGATATCAAAGACCTGATCTGTGAAGAAGGTGCATAA
Protein Sequence
- >Bo7g078020
MDKKTIRSPFFSSVGSSSLRVCLAGLDNSSKKVRASGGSGGGYARNPGMGPAGRTNSASSAASPTSSSSSVQQQQQQQLASRHQQQVRNSEANDGMFSYHAGGVQGMMGGGNFGSSSGSMQHPQQPRRLFDSPQPQPQQQQQGSSQEGQQNFNPMQQAYLQFALQAQQQKAQQQARMGMLGSSKDQDARMGPQQRNETKPHPQQVGTGQLVPGNIIRPMQAPQVSIPVSSQPSSSSGVPGENSPRPSSAGDISGQSGSGKARHAISTSSFASTSCPRMMNPAANPFSAQGRDNPLYPRHLVQPTSGMPSGNSMQTSANETHVLDHIASTNKSLGSAEHLQMQQPRQLNAPSPKAALSDAGLTYTDAVPVRVHVQDKSSNKTVENQARSLESGKESKTAASSNGQIFAKEADNGGDTEVPLATGHSQLFQNLEKEAASTDAVTKEEQQTDAFPVKSDQGADASTQETPRSDSIADKGKAVASDGGQSNVPLQAISPQQPKDTASARKYHGPLFDFPFFTQKHDTYGSATANASNNLTLAYDIKDLICEEGA