Information report for Bo6g093030
Gene Details
|
|
Functional Annotation
- RNA 3′end鈥損rocessing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.
Homologous
- Brassica napus: BnaC06G0293400ZS, BnaA07G0262400ZS, GSBRNA2T00064945001, BnaC02G0259600ZS, BnaA02G0195000ZS
- Brassica rapa: Bra003913, Bra007985
- Gossypium hirsutum: Gohir.D06G114601
- Oryza sativa: LOC_Os11g07490, OsCstF64
- Setaria viridis: SEVIR_8G055000v2
Gene Resources
- Pfam: PF14327 PF14304 PF00076
- UniProt: A0A0D3CX94
- RefSeq: XP_013591358.1
- AlphaFoldDB: A0A0D3CX94
- KEGG: boe:106299887
- OMA: MGYGVQT
- InterPro: IPR000504 , IPR012677 , IPR025742 , IPR026896 , IPR035979 , IPR038192
- PANTHER: PTHR45735 , PTHR45735:SF2
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 1.10.20.70 , 1.25.40.630 , 3.30.70.330
- OrthoDB: A0A0D3CX94
- CDD: cd12398
- eggNOG: KOG0108
- STRING: 109376.A0A0D3CX94
- HOGENOM: CLU_028601_4_0_1
Sequences
gDNA Sequence
- >Bo6g093030
TATGAATGCTGCGTCATGTTGTCTTGCTTGAGCGCTTGTTGCAGCTTTCTGACTTCTTGCTGTTGCTCTGGAGTCAGCAACCTTAGCTGTTCCGGTGTCAGGTTCATTACTTGCTGGAGCAACGTTGCCTGGACATCCGGGGAGATATGTGTCTGTAAAGAAAGATAATCAATCATTGGGGGAGTTTGTGAAGGATTTTGCTTATCCAATTAACTTTCCAAATGATGTGAACTGATTATACCTGATGCGCTCTCTCTTGTACTTGTACTGGATTTGGAAGCATTGAGTTAGACGCATGACCTTCACTGAATGAAGCAGTTCTCCTTTCATCCACTCTCATCATCTTCAATGGTCTGTTAATTGATTCATGAGGTCCCTCGTTTATCCTTTTGCCATAGTTTAGTGATACCATATGTCCACCTTGCTGTAAAGTATGTAAATACAAACGTTAACTTCATAGAAAATCTAAAAAACAAATAAGAGAAAGAAAGTAATGAAAAGGATCATATAGTCCACTAAACGTTCTTCATACTCACTAGATATACATTTGAACTTCGACTATTAACTTGAAAAGTAAAAAACAAACGTGAATCTCTTTCCCTTTGCAACTCATATTCCACTATCAATAAACTCTCCCTGTCAGATATGGTAACTAGAACAGAGCAGTCCTTTGGTGTAACACCGAATGTTGACATTTGAAAACTATGGTGCTAAACTATGTTAATAATTTTGAGCTAAATTTATATCTCAATAGTTTAATTCTCTGAAAAGATAAGATATTGTGGAAACTCACCTGCATAACAGAGTTTGTTAGTGGTGGCCGAGGTACTTGAGATGGCTGGATAGCATTATTTGGAACTGAAGTCTGAACACCATAACCCATGCTGATGGAAGTTGGAACCAATTGTTTTTGGCGTTGGAATGGAGCGGTTTCGCTGAGACCTTGAACTTGGGCATTCATAGAAGAAGGGCCTGGTTGGGCTACTAGTTGTGGAATCTGACTAAATGGTTGTTTAGAAGACTGTTGAACGGGAAACTGACTGTGGGGAGGTCGACTTAGCTGCTGTGACCTTTGTGCCAGTGGCGGTAATAGGTTCTGAGTAGATACTTGACCAGATAGTTGTGTGTCCTGAACTGAAGGCCCTGGCATAAGGTTTGGGGCCTGGACAATATTTGGCGTCTGCAACTGCACCATTCAAGAAGAGAAATAACCCTCTTAAGACAGAACAATATATACACAGAAGGAAAACGCACAAAATAAATACTCAGTGAGACAGAAACTTACAACTTGTGGACTCACAATCCCAAGCATTATCTGTGCCTACAACAGTGAACAAAGTATATGTTCACGAAACGGTGAAATAAGAAGTATTCTGTCAATAAGAATGGGTTAGTTAGTACCAGGAAAACAGCTTTTAGCAACTGAGGTCTTGAAACCAGCAACTGTCGAGCTTGTTCTTTGTTCTGCGTAGCCATTAACTGAGACCATTGAGAGAACACAATCACAATCAAACCACTAGTTTACAACGGTTCAACAACGCGTCAGTAAATATTTAAGACGAAACAACCCATGTTGATAGATTCACACCTTAATGGAAGATATAATTTCAGAGAGCTGACTTCTAGACATCTTGGCAAGATGAAGAGTCAGGGGATCACTAGCTGGAACCTGCAGCGTACTTTGTGTACCAACCTGGGGACCACCAAGCGCACTAGCCATAACAGATGCCGCTGATATAGCAAGGTTGATACCCACCGGCTGATGAAGATTCGAATCTACAGGCCCTCCAACCTGCTTTTGAGAATCTGACACAAAAGAAAGAAAATACAACAAGGATAAGTTATGTTTCTCTAAAGACAATCGTGGTCAGTAACTGAAACAAAACATACCAGTAGCAGCAGGTAGAGCAGGTCCTCCTTGACCCTAAAACCCAAAATTACAAAACTAGTTTAGTTATATAACTTATTTAGTTAAGACCGTTCAACATTTTAAGACCAATAGAGAGGAGTAGAACCTGATCTCGGGTTTTGTCGGTTCCTTTGTCATTCTCAGCAAAATCAACTCTTAATTGACGGCCATTGATTTCATAACTCTGAAGATTACGACGAGCACTCAGCGCTGTTTCTTCGTCCTTATACTCGCAAAAGCCGTAGCCTTTCGGTTTACCCGTTTCTCTATCGGTAACTAATCTGAATCAGGAAAAAAAAGGTGCGTTCTTTATCAAAACCCTCAAGCCAATTAATCCTAATTTGATGAATGACGTTACTACTGACCTAAAGGAGACAACGGGTCCAACCTCTCCACATATGTCTCTGAGTTGTTCCTCGGTAACGTCGTAAGGAATGTTCCCAACTAAAATCATACAATGAGAATAAAAAATTCAAGAACAGTGGTAAGGGAAGAAGATGTGAAAGGGGAGAGGGAGTACCGAAAACGCAGCGTCGTTGGGAAGAAGAAGCCAT
CDS Sequence
- >Bo6g093030
ATGGCTTCTTCTTCCCAACGACGCTGCGTTTTCGTTGGGAACATTCCTTACGACGTTACCGAGGAACAACTCAGAGACATATGTGGAGAGGTTGGACCCGTTGTCTCCTTTAGATTAGTTACCGATAGAGAAACGGGTAAACCGAAAGGCTACGGCTTTTGCGAGTATAAGGACGAAGAAACAGCGCTGAGTGCTCGTCGTAATCTTCAGAGTTATGAAATCAATGGCCGTCAATTAAGAGTTGATTTTGCTGAGAATGACAAAGGAACCGACAAAACCCGAGATCAGGGTCAAGGAGGACCTGCTCTACCTGCTGCTACTGATTCTCAAAAGCAGGTTGGAGGGCCTGTAGATTCGAATCTTCATCAGCCGGTGGGTATCAACCTTGCTATATCAGCGGCATCTGTTATGGCTAGTGCGCTTGGTGGTCCCCAGGTTGGTACACAAAGTACGCTGCAGGTTCCAGCTAGTGATCCCCTGACTCTTCATCTTGCCAAGATGTCTAGAAGTCAGCTCTCTGAAATTATATCTTCCATTAAGTTAATGGCTACGCAGAACAAAGAACAAGCTCGACAGTTGCTGGTTTCAAGACCTCAGTTGCTAAAAGCTGTTTTCCTGGCACAGATAATGCTTGGGATTGTGAGTCCACAAGTTTTGCAGACGCCAAATATTGTCCAGGCCCCAAACCTTATGCCAGGGCCTTCAGTTCAGGACACACAACTATCTGGTCAAGTATCTACTCAGAACCTATTACCGCCACTGGCACAAAGGTCACAGCAGCTAAGTCGACCTCCCCACAGTCAGTTTCCCGTTCAACAGTCTTCTAAACAACCATTTAGTCAGATTCCACAACTAGTAGCCCAACCAGGCCCTTCTTCTATGAATGCCCAAGTTCAAGGTCTCAGCGAAACCGCTCCATTCCAACGCCAAAAACAATTGGTTCCAACTTCCATCAGCATGGGTTATGGTGTTCAGACTTCAGTTCCAAATAATGCTATCCAGCCATCTCAAGTACCTCGGCCACCACTAACAAACTCTGTTATGCAGCAAGGTGGACATATGGTATCACTAAACTATGGCAAAAGGATAAACGAGGGACCTCATGAATCAATTAACAGACCATTGAAGATGATGAGAGTGGATGAAAGGAGAACTGCTTCATTCAGTGAAGGTCATGCGTCTAACTCAATGCTTCCAAATCCAGTACAAGTACAAGAGAGAGCGCATCAGACACATATCTCCCCGGATGTCCAGGCAACGTTGCTCCAGCAAGTAATGAACCTGACACCGGAACAGCTAAGGTTGCTGACTCCAGAGCAACAGCAAGAAGTCAGAAAGCTGCAACAAGCGCTCAAGCAAGACAACATGACGCAGCATTCATAG
Protein Sequence
- >Bo6g093030
MASSSQRRCVFVGNIPYDVTEEQLRDICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNLQSYEINGRQLRVDFAENDKGTDKTRDQGQGGPALPAATDSQKQVGGPVDSNLHQPVGINLAISAASVMASALGGPQVGTQSTLQVPASDPLTLHLAKMSRSQLSEIISSIKLMATQNKEQARQLLVSRPQLLKAVFLAQIMLGIVSPQVLQTPNIVQAPNLMPGPSVQDTQLSGQVSTQNLLPPLAQRSQQLSRPPHSQFPVQQSSKQPFSQIPQLVAQPGPSSMNAQVQGLSETAPFQRQKQLVPTSISMGYGVQTSVPNNAIQPSQVPRPPLTNSVMQQGGHMVSLNYGKRINEGPHESINRPLKMMRVDERRTASFSEGHASNSMLPNPVQVQERAHQTHISPDVQATLLQQVMNLTPEQLRLLTPEQQQEVRKLQQALKQDNMTQHS