Information report for Bo6g062160
Gene Details
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Functional Annotation
- Encodes a NAC-domain transcription factor. Positively regulates aging-induced cell death and senescence in leaves. This gene is upregulated in response to salt stress in wildtype as well as NTHK1 transgenic lines although in the latter case the induction was drastically reduced. It was also upregulated by ABA, ACC and NAA treatment, although in the latter two cases, the induction occurred relatively late when compared with NaCl or ABA treatments. Note: this protein (AtNAC6) on occasion has also been referred to as AtNAC2, not to be confused with the AtNAC2 found at locus AT3G15510.
Homologous
- Arabidopsis thaliana: AT5G39610.1
- Brassica napus: GSBRNA2T00063201001, BnaC06G0161400ZS, GSBRNA2T00098528001, BnaA07G0170900ZS, BnaC04G0391700ZS, GSBRNA2T00044895001, BnaA04G0108900ZS, GSBRNA2T00114310001
- Brassica rapa: XP_009125108.1, Bra028435, XP_009139909.1, Bra025658
- Raphanus raphanistrum: RrC3174_p1
Gene Resources
- Pfam: PF02365
- UniProt: A0A0D3CSZ1
- RefSeq: XP_013590191.1
- AlphaFoldDB: A0A0D3CSZ1
- KEGG: boe:106298602
- OMA: CKEDHEL
- InterPro: IPR003441 , IPR036093
- PANTHER: PTHR31744 , PTHR31744:SF201
- SUPFAM: SSF101941
- PROSITE: PS51005
- Gene3D: 2.170.150.80
- OrthoDB: A0A0D3CSZ1
- SMR: A0A0D3CSZ1
- eggNOG: ENOG502QR2M
- STRING: 109376.A0A0D3CSZ1
- HOGENOM: CLU_035664_5_2_1
Sequences
gDNA Sequence
- >Bo6g062160
TGGATTGTGATGCATCAATAATAGTTGAAATGGTAGAAGATGAAGAACACATTGATCTACCACCTGGATTCAGATTTCACCCTACTGATGAAGAACTCATATCTCACTACCTTAAACAAAAGGTCTTCAACACTTTATTCTCTGCCACTGCCATTGGTGAAGTTGATCTCAATAAGATTGAGCCTTGGGACTTACCCAGTAAGTTTCTCAATCTTTCCATATTCAGTTTTTTTTTTTACAATAAGAGAATTCTAAATATGAATATAACCTCTTCTTTTTTGGTAAAATATGAATATAACTTCTCAGGACCTCTTATCCTTAATAAAAATTTGCACAAACAGTACAAATTTTATTTTTGTTCTATTTGTTTTAAGACCATTATTTTTGTTCTGTAATTAATTAAGTTCACAAATTTTATTGGTATGGCTTTTGGTGGAATAGGGAAGGCTAAGATGGGGGAGAAAGAATGGTATTTCTTTTGTGTACGAGATCGGAAATACCCAACCGGTTTAAGGACAAACCGGGCAACGGAAGCCGGTTATTGGAAAGCCACAGGCAAAGACAAAGAGATTTTCAAGGGAAACTCACTAGTGGGTATGAAGAAAACTCTGGTTTTCTACAAAGGAAGAGCTCCTAAAGGGATTAAAACCAATTGGGTACTGCATGAATATCGATTAGAAGGCATATTTTTACTCCAAAATCTTCCCCAAACAGCTAAGGTAATAGAGTTTATGTTTTTCTTTCTTTTTTTTTTGGTGGACTTGAGTTTGATCTTTTGTGTGTTTGGTTTTTTTGTCTGTGAATGTAGAACGAATGGGTTATTTGTCGTGTTTTCCAGAAACTTGCTGATGGTACAAAGGTTGATATGTCCGATTTAATGTTTCTTGATTCACATTTTAACCGTACTGAACCGACAAGATTACCTTCATTGATGGATTGTTCTCAAAGAGATTCCTTCCTTGGTTCGTCGACTCACGTGACCTGCTTCTCCGACCAAGAAACCAAAGACAAAAGACTCATGCATCACGAGTCCAAAGACCGTTCTGGTTCTCTGTTTTACTCCGATCCTTTGTTTCTTCAAGACAATTATTCGCTAATGAAGACGTTTCTTAACGATCAAGAAACCTTATTTCCCGGTCCTGACTCCACCGGTTTAGCCGCCGGTACGGGAGAATTGGATTGCTTTTGGAATCCTTGA
CDS Sequence
- >Bo6g062160
ATGGATTGTGATGCATCAATAATAGTTGAAATGGTAGAAGATGAAGAACACATTGATCTACCACCTGGATTCAGATTTCACCCTACTGATGAAGAACTCATATCTCACTACCTTAAACAAAAGGTCTTCAACACTTTATTCTCTGCCACTGCCATTGGTGAAGTTGATCTCAATAAGATTGAGCCTTGGGACTTACCCAGGAAGGCTAAGATGGGGGAGAAAGAATGGTATTTCTTTTGTGTACGAGATCGGAAATACCCAACCGGTTTAAGGACAAACCGGGCAACGGAAGCCGGTTATTGGAAAGCCACAGGCAAAGACAAAGAGATTTTCAAGGGAAACTCACTAGTGGGTATGAAGAAAACTCTGGTTTTCTACAAAGGAAGAGCTCCTAAAGGGATTAAAACCAATTGGGTACTGCATGAATATCGATTAGAAGGCATATTTTTACTCCAAAATCTTCCCCAAACAGCTAAGAACGAATGGGTTATTTGTCGTGTTTTCCAGAAACTTGCTGATGGTACAAAGGTTGATATGTCCGATTTAATGTTTCTTGATTCACATTTTAACCGTACTGAACCGACAAGATTACCTTCATTGATGGATTGTTCTCAAAGAGATTCCTTCCTTGGTTCGTCGACTCACGTGACCTGCTTCTCCGACCAAGAAACCAAAGACAAAAGACTCATGCATCACGAGTCCAAAGACCGTTCTGGTTCTCTGTTTTACTCCGATCCTTTGTTTCTTCAAGACAATTATTCGCTAATGAAGACGTTTCTTAACGATCAAGAAACCTTATTTCCCGGTCCTGACTCCACCGGTTTAGCCGCCGGTACGGGAGAATTGGATTGCTTTTGGAATCCTTGA
Protein Sequence
- >Bo6g062160
MDCDASIIVEMVEDEEHIDLPPGFRFHPTDEELISHYLKQKVFNTLFSATAIGEVDLNKIEPWDLPRKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFKGNSLVGMKKTLVFYKGRAPKGIKTNWVLHEYRLEGIFLLQNLPQTAKNEWVICRVFQKLADGTKVDMSDLMFLDSHFNRTEPTRLPSLMDCSQRDSFLGSSTHVTCFSDQETKDKRLMHHESKDRSGSLFYSDPLFLQDNYSLMKTFLNDQETLFPGPDSTGLAAGTGELDCFWNP