Information report for Bo5g134640
Gene Details
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Functional Annotation
- A novel leucine-rich repeat protein. Interacts directly with MADS domain transcription factor.
Homologous
- Brassica napus: GSBRNA2T00074310001, BnaA05G0427300ZS, GSBRNA2T00000211001, BnaC05G0479700ZS, GSBRNA2T00000213001, BnaA05G0427400ZS, GSBRNA2T00074311001, GSBRNA2T00074309001, BnaC05G0479500ZS
- Brassica rapa: Brara.E02867, Brara.E02868, Bra034773
Gene Resources
- Pfam: PF00560 PF08263
- UniProt: A0A0D3CKX7
- RefSeq: XP_013584823.1
- AlphaFoldDB: A0A0D3CKX7
- KEGG: boe:106293713
- OMA: IFLSWNR
- InterPro: IPR001611 , IPR013210 , IPR032675 , IPR053211
- PANTHER: PTHR48060 , PTHR48060:SF21
- SUPFAM: SSF52058
- PROSITE: PS51257
- Gene3D: 3.80.10.10
- OrthoDB: A0A0D3CKX7
- STRING: 109376.A0A0D3CKX7
- HOGENOM: CLU_000288_18_22_1
Sequences
gDNA Sequence
- >Bo5g134640
TGAAGCTCCTTATTCGTCTCTCTATCTTCTTCGCTGCACTCTCCATCTCTTCTCTTCCATCATCTTACAGCTGCAACCCAAAAGACAAAAACACCCTCCTTCAAATCAAGAAGCATTTTAACAACCCGAAACTCCTCTCCTCCTGGGATCCTCAAACCGACTGCTGTACTAGCTGGACAGGCATTGAGTGCACTAACGGCCGCGTCACATTATTCTCTATGGCCAACGACGACAGTGTCGTCGGTCAGATCCCGGACCAGATCGGCGACCTCCCTGAACTCCGTACACTCGAAATGAGTTTCATAAATCTAACCGGAAACATACCACGCACCATCACCAAACTCAAGCACCTCGTCCTCATCTTCTTAAGCTGGAACAGACTATCCGGTCCAATTCCTGATTACATCAGCGAGCTCAAAAGCGTTACGTTCTTGGACATCTCCTTTAACAAGTTTACCGGTCCTATTCCCGGTTGGCTTACTCAGATGCCGAAGCTTCAGACCTTTCAGGCCAACAACAATTCGCTAACCGGTCCTATACCGAACTCTTTCGGTTCCTTTGTAGGCAACGCCCCTAATCTTTTCTTGCCTTACAATAAGCTCTCAGGTATACCAATATATTTTTTCAATTATACTATTTCAGAATATAAGTAGTTTAGGATATTTTTATATTACAAAATATATAATTAAGTAGTTTTGACATTTGTATTCACTTTTTACATTTATGTCGCCAATTATGCAAACATTTTTATGATCAGTTATAAGAAGGTTAAATATTTTCTTAATCATTGGACTTTCACTAAAAGACCTAGAACATCATTATTGGTAAGCTTTAACATAGTAGTCTCACCATTATATTAATGAAATTAAATGCAAAATGTAAAAAAATAAAAGAGAATCGATGCAATAAGTCTCTGCTGAGAAATTATATCTGATAGTTAAGAAACTCAAATGCAAGGTGTCTTCTTTCTATTGCTCTACTTTTTTTTAAATTTTAAATCATGGAAGTAAACAATATTATTATTATATACATTAGATACTTATAGGAAGACATCTACCGTTAATGATGCTTTTATATTTTGAAACATATGAGATGAATTATAACTTTAGGTTTAAATGTTGGATCTAAAAATACACTAATTTGAGATTTCTTAAAATATGGATATTTTTAAAGATCATGTTATTGATTATTTTCAGCACCATTGTTATTATTATTATTATTATTATTATTATTGATAATTTAGTAAATCATATCCTTTCGTTTCTCTAAAATTGTCAGTTTGATAAATTTCAAGCCGAATATCCAATAACATTGCTCTGGCAGGAAAAATACCGGAGTCATTATCAAAGATCGACTTTCAAGCAGTAGTTTTGAAGGGAAATGGTTTCACAGGAGATGGTTCAATGTTTTTCGGAGGGAACAAAAGAACAGTACAATTGGATCTGTCGAGAAATTTGTTTGAGTTCGATCTCTCCAAGGTTAAGTTCGGTAAGAGCATGGCTTTGTTGGATCTGAGCCATAACCGAATCTTCGGGACGCTTCCTAGGGAACTGACTGAGCTACGTCTCGAGCGTTTCAACATTAGTTACAATCGTCTATGCGGAAAAATCCCACGTGGTGGTCAACTTCAGACCTTTAAATCATATGAGTTCGCTGAGAACCGCTGTCTTTGTGGGTCCGCACTTAAGAAGGCTTGTTAA
CDS Sequence
- >Bo5g134640
ATGAAGCTCCTTATTCGTCTCTCTATCTTCTTCGCTGCACTCTCCATCTCTTCTCTTCCATCATCTTACAGCTGCAACCCAAAAGACAAAAACACCCTCCTTCAAATCAAGAAGCATTTTAACAACCCGAAACTCCTCTCCTCCTGGGATCCTCAAACCGACTGCTGTACTAGCTGGACAGGCATTGAGTGCACTAACGGCCGCGTCACATTATTCTCTATGGCCAACGACGACAGTGTCGTCGGTCAGATCCCGGACCAGATCGGCGACCTCCCTGAACTCCGTACACTCGAAATGAGTTTCATAAATCTAACCGGAAACATACCACGCACCATCACCAAACTCAAGCACCTCGTCCTCATCTTCTTAAGCTGGAACAGACTATCCGGTCCAATTCCTGATTACATCAGCGAGCTCAAAAGCGTTACGTTCTTGGACATCTCCTTTAACAAGTTTACCGGTCCTATTCCCGGTTGGCTTACTCAGATGCCGAAGCTTCAGACCTTTCAGGCCAACAACAATTCGCTAACCGGTCCTATACCGAACTCTTTCGGTTCCTTTGTAGGCAACGCCCCTAATCTTTTCTTGCCTTACAATAAGCTCTCAGGAAAAATACCGGAGTCATTATCAAAGATCGACTTTCAAGCAGTAGTTTTGAAGGGAAATGGTTTCACAGGAGATGGTTCAATGTTTTTCGGAGGGAACAAAAGAACAGTACAATTGGATCTGTCGAGAAATTTGTTTGAGTTCGATCTCTCCAAGGTTAAGTTCGGTAAGAGCATGGCTTTGTTGGATCTGAGCCATAACCGAATCTTCGGGACGCTTCCTAGGGAACTGACTGAGCTACGTCTCGAGCGTTTCAACATTAGTTACAATCGTCTATGCGGAAAAATCCCACGTGGTGGTCAACTTCAGACCTTTAAATCATATGAGTTCGCTGAGAACCGCTGTCTTTGTGGGTCCGCACTTAAGAAGGCTTGTTAA
Protein Sequence
- >Bo5g134640
MKLLIRLSIFFAALSISSLPSSYSCNPKDKNTLLQIKKHFNNPKLLSSWDPQTDCCTSWTGIECTNGRVTLFSMANDDSVVGQIPDQIGDLPELRTLEMSFINLTGNIPRTITKLKHLVLIFLSWNRLSGPIPDYISELKSVTFLDISFNKFTGPIPGWLTQMPKLQTFQANNNSLTGPIPNSFGSFVGNAPNLFLPYNKLSGKIPESLSKIDFQAVVLKGNGFTGDGSMFFGGNKRTVQLDLSRNLFEFDLSKVKFGKSMALLDLSHNRIFGTLPRELTELRLERFNISYNRLCGKIPRGGQLQTFKSYEFAENRCLCGSALKKAC