Information report for Bo5g094630
Gene Details
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Functional Annotation
- Encodes PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP), a homolog of human Paf1 Complex (Paf1C) subunit Parafibromin. Human Parafibromin assists in mediating output from the Wnt signaling pathway, and dysfunction of the encoding gene HRPT2 conditions specific cancer-related disease phenotypes. PHP resides in a ~670-kDa protein complex in nuclear extracts, and physically interacts with other known Paf1C-related proteins in vivo. Loss of PHP specifically conditioned accelerated phase transition from vegetative growth to flowering and resulted in misregulation of a very limited subset of genes that included the flowering repressor FLOWERING LOCUS C (FLC).
Homologous
- Arabidopsis thaliana: AT3G22590
- Brassica napus: BnaC05G0355600ZS, BnaA05G0334700ZS
- Brassica rapa: Bra040834
- Citrullus lanatus: Cla97C05G086200
- Cucumis melo: MELO3C006520
- Glycine max: Glyma.11G008100
- Gossypium hirsutum: Gohir.D02G039900, Gohir.A02G033400
- Juglans regia: Jr07_21290
- Medicago truncatula: Medtr5g006960
- Prunus avium: Pav_sc0000449.1_g520.1.mk
- Prunus persica: PRUPE_1G016800
- Rosa chinensis: RchiOBHm_Chr4g0415641
- Vitis vinifera: VIT_05s0020g03720
Gene Resources
- Pfam: PF05179 PF16050
- UniProt: A0A3P6EKP0
- EMBL: LR031877
- AlphaFoldDB: A0A3P6EKP0
- OMA: CAFHLKY
- InterPro: IPR007852 , IPR031336 , IPR032041 , IPR038103
- PANTHER: PTHR12466 , PTHR12466:SF8
- Gene3D: 3.40.50.11990
- SMR: A0A3P6EKP0
Sequences
gDNA Sequence
- >Bo5g094630
TAAGAATGTGACCGAGACCGAACAAACTCCTCAAGTTTTTCCCAGACTTCTAATGCTGCAGCCCGGTCTTGATGCCTCTTATTCTTACTAATCTGAAAACACACGGAAGAAGTTCCTCGATTCAGTAATCCGATCTCAATACCAGTATCAACATAACAGCAGATAAAAGAAGGTGTTTTAAATTACTCACCGAGATAATCTTCACATTCCACTGCTTCACCGTCTTGGCTGATTCAATACTATCATCTTCAAACCGCAAGAAGAACCCAATTACTGCAAACAAAAGAAACAATTATCAAAACATCAACTCATTCAAATGTCAATCCCAAGAAAACCAAAAAAAGAATTGAACTTTAGCATTCATCTTCACTTACTCTTATTGAAAATCTCAACATGGTCCTTGAAAGGCCAATCCTTGAACTGCCAATCCTTGCCCAACACGAAAACCGCAACAACACGGTCCCAGTCATCAGGCTTCAAAGCAGAAGGCTTATCCCTAACCTCATAAGCAGTCACAACCCTCTCCCTATCTCTACTAAACTTCTTCTGAACCGTAATACAATCAGGCTTCACCCCTTTCATCTCCTTAGCCTTAACATCATTCGGTATATAAACTCCATCCTCAAGAAACTCCTTCACATTGTATATAGTAATCAGCGTCTGAAACGCACTCGGGACAAGAATGATCGGCACACCTTCCCCAATCTTCCTAAGCTTAGACTTAGGGTTAGCATCATAACCAGAATCATCACCTCCGCCGCCGGTGAAGCCTACAATGCCTCTCTCTTCAGCACCCATCAACCTACTCTTGGCGACCAAGCCGTCTTTCCTCTGGTGAGACTCGATCCTCTGCCTCTCCTCTTCCCTCTTGGTCGAATTCACCAACACGCTGTGGAAATCTCTGTTCTTGCACTCGAGGATCGCGTCTCGGCTCTTCAACGGCCTCTCGTTGGACCGAATCAGCATAATGTAATCAACGTCCTCTCCGCCGTAACCGTCAACCTCTTCGACGGCGTTTTCTCGGGAGACGAAAGCAGAGTTGTCTTGATCGGGTCTGTACTCTTCGTTCTGCTTCTGGCTCTGGGCGTTCTGCTGCTGGAGCAGGAGGTAGTCGATCGAATCGGAGGAGGCTACTCTCCCGGTGAGGTAATCGAGGAGAGGTTTCCGATCCGGTAGCGTAACGGCGGGGACGGAGTTTTTGACGGTGGATTGCATGTACTCTCCGAGTTTGAGGTGGTGGTTCTTCACGTAGTGGACTAAGGCTTCTAGAGTGTAGAGGCTTCCGCCTTTGGATCTGTACGCCGTCTCTGTCGCGCAGGGGAAGGAGTATCCGGATCCGAATCGGTAATTGGCTCCGACCCGTTCGATTTTATCCAGGTCTCCGCGCGTCGTGAAGTCCTTCAGCACCGATAACGGATCCAT
CDS Sequence
- >Bo5g094630
ATGGATCCGTTATCGGTGCTGAAGGACTTCACGACGCGCGGAGACCTGGATAAAATCGAACGGGTCGGAGCCAATTACCGATTCGGATCCGGATACTCCTTCCCCTGCGCGACAGAGACGGCGTACAGATCCAAAGGCGGAAGCCTCTACACTCTAGAAGCCTTAGTCCACTACGTGAAGAACCACCACCTCAAACTCGGAGAGTACATGCAATCCACCGTCAAAAACTCCGTCCCCGCCGTTACGCTACCGGATCGGAAACCTCTCCTCGATTACCTCACCGGGAGAGTAGCCTCCTCCGATTCGATCGACTACCTCCTGCTCCAGCAGCAGAACGCCCAGAGCCAGAAGCAGAACGAAGAGTACAGACCCGATCAAGACAACTCTGCTTTCGTCTCCCGAGAAAACGCCGTCGAAGAGGTTGACGGTTACGGCGGAGAGGACGTTGATTACATTATGCTGATTCGGTCCAACGAGAGGCCGTTGAAGAGCCGAGACGCGATCCTCGAGTGCAAGAACAGAGATTTCCACAGCGTGTTGGTGAATTCGACCAAGAGGGAAGAGGAGAGGCAGAGGATCGAGTCTCACCAGAGGAAAGACGGCTTGGTCGCCAAGAGTAGGTTGATGGGTGCTGAAGAGAGAGGCATTGTAGGCTTCACCGGCGGCGGAGGTGATGATTCTGGTTATGATGCTAACCCTAAGTCTAAGCTTAGGAAGATTGGGGAAGGTGTGCCGATCATTCTTGTCCCGAGTGCGTTTCAGACGCTGATTACTATATACAATGTGAAGGAGTTTCTTGAGGATGGAGTTTATATACCGAATGATGTTAAGGCTAAGGAGATGAAAGGGGTGAAGCCTGATTGTATTACGGTTCAGAAGAAGTTTAGTAGAGATAGGGAGAGGGTTGTGACTGCTTATGAGGTTAGGGATAAGCCTTCTGCTTTGAAGCCTGATGACTGGGACCGTGTTGTTGCGGTTTTCGTGTTGGGCAAGGATTGGCAGTTCAAGGATTGGCCTTTCAAGGACCATGTTGAGATTTTCAATAAGATAATTGGGTTCTTCTTGCGGTTTGAAGATGATAGTATTGAATCAGCCAAGACGGTGAAGCAGTGGAATGTGAAGATTATCTCGATTAGTAAGAATAAGAGGCATCAAGACCGGGCTGCAGCATTAGAAGTCTGGGAAAAACTTGAGGAGTTTGTTCGGTCTCGGTCACATTCTTAG
Protein Sequence
- >Bo5g094630
MDPLSVLKDFTTRGDLDKIERVGANYRFGSGYSFPCATETAYRSKGGSLYTLEALVHYVKNHHLKLGEYMQSTVKNSVPAVTLPDRKPLLDYLTGRVASSDSIDYLLLQQQNAQSQKQNEEYRPDQDNSAFVSRENAVEEVDGYGGEDVDYIMLIRSNERPLKSRDAILECKNRDFHSVLVNSTKREEERQRIESHQRKDGLVAKSRLMGAEERGIVGFTGGGGDDSGYDANPKSKLRKIGEGVPIILVPSAFQTLITIYNVKEFLEDGVYIPNDVKAKEMKGVKPDCITVQKKFSRDRERVVTAYEVRDKPSALKPDDWDRVVAVFVLGKDWQFKDWPFKDHVEIFNKIIGFFLRFEDDSIESAKTVKQWNVKIISISKNKRHQDRAAALEVWEKLEEFVRSRSHS