Information report for Bo5g043120
Gene Details
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Functional Annotation
- Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes.
Homologous
- Arabidopsis thaliana: AT1G25560.1
- Brassica napus: BnaC05G0224800ZS, BnaA09G0438900ZS, GSBRNA2T00142419001, GSBRNA2T00090567001, BnaC03G0630000ZS, BnaA08G0227500ZS, GSBRNA2T00026623001
- Brassica rapa: XP_009115339.1, Bra024735, XP_009109894.1, Bra011002
Gene Resources
- Pfam: PF00847 PF02362
- UniProt: A0A0D3CD61
- RefSeq: XP_013637910.1
- AlphaFoldDB: A0A0D3CD61
- KEGG: boe:106343287
- OMA: KQTMINA
- InterPro: IPR001471 , IPR003340 , IPR015300 , IPR016177 , IPR036955 , IPR044800
- PANTHER: PTHR31140 , PTHR31140:SF120
- SUPFAM: SSF101936 , SSF54171
- PROSITE: PS50863 , PS51032
- Gene3D: 2.40.330.10 , 3.30.730.10
- OrthoDB: A0A0D3CD61
- SMR: A0A0D3CD61
- CDD: cd00018 , cd10017
- eggNOG: ENOG502QRVI
- STRING: 109376.A0A0D3CD61
- HOGENOM: CLU_038898_0_0_1
Sequences
gDNA Sequence
- >Bo5g043120
TGGATAACAGCTGTATAGATGACAGTACTAGCAACACTTCAGGGTCTCTCTCCACCTCTACTCCCTCCGCGAAGAAGAAACTCTCCCCTCCTCCACCTCCTCCGGCGACGATGCGTCTCTACAGAATGGGAAGCGGCGGAAGCAGCGTCGTGCTGGATTCTGAGAACGGCGTCGAGACTGAGTCACGCAAGCTCCCGTCGTCGAAGTTCAAAGGCGTTGTCCCTCAGCCTAACGGAAGATGGGGAGCTCAGATTTACGAGAAGCACCAGCGTGTCTGGCTCGGCACTTTCAACGAGGAGGAAGAAGCCGCGGCTTCCTACGACATCGCCGCTAGGAGATTCCGCGGCCGCGACGCCGTCACGAACTTCAAGTCGCCGGCGATCGACGGGACCGACGCTGAGTCTGCTTTCCTCGAGGCTCATTCTAAGGCCGAGATCGTTGATATGCTGAGGAAACACACTTACGCCGACGAGCTTCAACAGAGCAAACGGAAGTTCCTTGACGGTAACGGAAAACGGTGCGGCTCGGGGACGGCGACGATGAGTAACGGAAACGACGGCGTTTCGAGAGCGCGTGAAGTTCTTTTCGAGAAAGCCGTTACGCCTAGCGACGTCGGGAAGCTTAACCGGCTGGTGATACCGAAGCAGCACGCGGAGAAGCATTTTCCGTTACCGGCGATGACGACGGCGACGGTGGTGGCGGCGATGACTCCGTCTCCGACGAAAGGCGTTTTGATTAATTTGGAAGACAGGATGGGGAAGGTGTGGCGGTTCCGTTACTCGTACTGGAACAGCAGTCAAAGTTACGTGTTGACCAAGGGCTGGAGCCGGTTCGTTAAGGAGAAGAATCTCCGAGCCGGCGATGTGGTTTGCTTCGAGAGGTCGACCGGTCCAGACCGGCAGTTGTATATTGACTGGAAAGTTCAGTCCGGTACGGAGGAAATTACACCGGTTCAGAGTGTGGTTAGGCTATTCGGGGTCAACATTTTTAATGCGACGACTAACGCTAAACCAAACGACGTCGCAGTAGAGTGCGGTGGCAAGAAAAGATCTCGGGAAGTTGATTTGTTTGCGTTAGGGTGTTCCAAGAAGCAGACGATGATCAATGCCTTGTGA
CDS Sequence
- >Bo5g043120
ATGGATAACAGCTGTATAGATGACAGTACTAGCAACACTTCAGGGTCTCTCTCCACCTCTACTCCCTCCGCGAAGAAGAAACTCTCCCCTCCTCCACCTCCTCCGGCGACGATGCGTCTCTACAGAATGGGAAGCGGCGGAAGCAGCGTCGTGCTGGATTCTGAGAACGGCGTCGAGACTGAGTCACGCAAGCTCCCGTCGTCGAAGTTCAAAGGCGTTGTCCCTCAGCCTAACGGAAGATGGGGAGCTCAGATTTACGAGAAGCACCAGCGTGTCTGGCTCGGCACTTTCAACGAGGAGGAAGAAGCCGCGGCTTCCTACGACATCGCCGCTAGGAGATTCCGCGGCCGCGACGCCGTCACGAACTTCAAGTCGCCGGCGATCGACGGGACCGACGCTGAGTCTGCTTTCCTCGAGGCTCATTCTAAGGCCGAGATCGTTGATATGCTGAGGAAACACACTTACGCCGACGAGCTTCAACAGAGCAAACGGAAGTTCCTTGACGGTAACGGAAAACGGTGCGGCTCGGGGACGGCGACGATGAGTAACGGAAACGACGGCGTTTCGAGAGCGCGTGAAGTTCTTTTCGAGAAAGCCGTTACGCCTAGCGACGTCGGGAAGCTTAACCGGCTGGTGATACCGAAGCAGCACGCGGAGAAGCATTTTCCGTTACCGGCGATGACGACGGCGACGGTGGTGGCGGCGATGACTCCGTCTCCGACGAAAGGCGTTTTGATTAATTTGGAAGACAGGATGGGGAAGGTGTGGCGGTTCCGTTACTCGTACTGGAACAGCAGTCAAAGTTACGTGTTGACCAAGGGCTGGAGCCGGTTCGTTAAGGAGAAGAATCTCCGAGCCGGCGATGTGGTTTGCTTCGAGAGGTCGACCGGTCCAGACCGGCAGTTGTATATTGACTGGAAAGTTCAGTCCGGTACGGAGGAAATTACACCGGTTCAGAGTGTGGTTAGGCTATTCGGGGTCAACATTTTTAATGCGACGACTAACGCTAAACCAAACGACGTCGCAGTAGAGTGCGGTGGCAAGAAAAGATCTCGGGAAGTTGATTTGTTTGCGTTAGGGTGTTCCAAGAAGCAGACGATGATCAATGCCTTGTGA
Protein Sequence
- >Bo5g043120
MDNSCIDDSTSNTSGSLSTSTPSAKKKLSPPPPPPATMRLYRMGSGGSSVVLDSENGVETESRKLPSSKFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAAASYDIAARRFRGRDAVTNFKSPAIDGTDAESAFLEAHSKAEIVDMLRKHTYADELQQSKRKFLDGNGKRCGSGTATMSNGNDGVSRAREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTATVVAAMTPSPTKGVLINLEDRMGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQLYIDWKVQSGTEEITPVQSVVRLFGVNIFNATTNAKPNDVAVECGGKKRSREVDLFALGCSKKQTMINAL