Information report for Bo5g002760
Gene Details
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Functional Annotation
- LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1;LHY1/CCA1-like protein, LATE ELONGATED HYPOCOTYL 1 gene b
Homologous
- Arabidopsis thaliana: AT1G01060.4, AT1G01060.3, AT1G01060.2, AT1G01060.1
- Brassica napus: GSBRNA2T00085393001, BnaC05G0010100ZS, GSBRNA2T00150502001, BnaA10G0008600ZS
- Brassica rapa: XP_009119664.1, Bra033291
Gene Resources
- Pfam: PF00249
- UniProt: A0A0D3C707
- RefSeq: XP_013587350.1 , XP_013587351.1 , XP_013587352.1 , XP_013587353.1
- AlphaFoldDB: A0A0D3C707
- KEGG: boe:106295895
- OMA: NVNTQFH
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017884 , IPR017930
- PANTHER: PTHR12802 , PTHR12802:SF151
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS51293 , PS51294
- Gene3D: 1.10.10.60
- OrthoDB: A0A0D3C707
- SMR: A0A0D3C707
- CDD: cd00167
- eggNOG: KOG0724
- STRING: 109376.A0A0D3C707
- HOGENOM: CLU_025358_0_0_1
Sequences
gDNA Sequence
- >Bo5g002760
TGGATACAAATACATCCGGAGATGAGTTATTAACCAAGGTATTTTGGTGCTTAAAAGATTGTCCAGGTTTGAGATTTTTTGGATTCTTCTCGTTGTTGTGTGAGTGAAGATTTGGTTTGTTTTTTGTGAATGAAAAGGCAAGAAAGCCGTATACTATTACAAAGCAGCGGGAACGATGGACAGAGGATGAGCATGATAGGTTTCTTGAAGCCTTGAGGCTTTATGGAAGGGCCTGGCAACGTATAGAAGGTCTACTATTGTTATCTTCTGTATCTATTTTATTAAATTTAATATTTTCCAAAAGTTATCTCTCTCTTTTCTTGTGTGTGCAGAACATATTGGGACAAAGACTGCTGTTCAGATCAGAAGTCATGCACAAAAGTTCTTCACAAAGGTAAGCTCATCCTTCCGAATCTTCTATTTAGTGAAGAAGATACAACTGGTTGGTAGTGAGAGATAATGACCGATCAATATAATTTAATTGGTGACCATGTTTTAGACGTTGCCTGGTTTTTCTATGGTTCTGTTTTTCTACATTGCTTCAACTATAGTGTGTTGGATAGCAGCAGGCTTTACCTTGTTTCAAAACTTACCCTTAGATTATAGCTTCATTATCTGGACCATAACACTGGTCTATAGTAACCAAAAAATAGCATTGCATATGCATAACATAAGTGTCTCACATACTCAGTAAAGTCGGATGAAATAATGAGATTGCATGGACTCTTTTAGCCATTCCAAATGGAAAAACCAAACCTCCTTGGCCGGTTGGCCCTATAGGACAGGAAATGAAGTAACTGTCTTGTCTACCCCCGTACAATTCGGGTCAGTATAAAGACTCTTTTTAACCTCAAGAGTCTCAGGGTTGCATTTACCATCTCCAGGTTGGAACCAAAAAAAAACTAACAGTAATGGTTCAACTCTTTCAGCTGGAGAAAGAGGCAGAAGCTAAAGGCATTCCTGTTTGTCAAGCTCTCAACATAGAGATCCCACCTCCTCGTCCTAAAAGGAAACCCAATACTCCTTATCCTCGTAAACCTGGCAACAATGGCCCATCAGCAAAACTTGTATCCTCAGCCTCTTCTTCACAATGTAACCAGGCTTTCTTGGATTTGGAAACAGTGCCCATCTCTGAGGTTTATTCTTCTCTCTTTTTCTCTTCTATCATTTTGGCTTTTCTTCTTGTGATAGTTTTGTTATGTTTTTTTTTTTTTTTTTTATGGTTTAGGAAACATCAAATGGGAAAGAAAATCAAGATGATAACTGCTCAGGGGTTTCTACTGTAAACAAATGTCCCTTACCAAAGAAAGTTACTCAACCGTCTCTAAGAAAGGTATACAACTTGTAGTCCAAGAACATGATGAGTTTGCTGTATTATAAGCTCAATAGCATGTAAGAATAAAACTTGTTCTATTTTGATTTTGAGCAGGAAAGTGCCGATAATGGAACAAGTAAGGCGTCAAATGTGAACACTCAGTTTCATCCCCCAGGTATGGTCTCTCAAGACTTGATGTTTTGTCCTATGGGAGATCGTGTTCACGGGCACGTGAATCTTCCAGCTACCACAACATCATCTGCTACTACAACTACTTCTCAACAGGCGTTTCCTGCGTGCCCTTCCCACGATTCGTTTCTCCACTTCTCCTCTACTTTCCCCAATCTCATTATCTCAAGCCTCCTACAGAATCCTGCAGCTCATGCCGCAGCCACATTCGCTGCTTCGGTCTGGCCCTATTCCAACGTCGGGAACTCGGGAGGAGATTCATCAACGCAAATGAGCTCCTCTCCTCCAAGTATAGCTGCCATCGCTGCTGCTACGGTAGCTGCTGCAACTGCTTGGTGGGCTTCTCATGGACTTATTCCTGTATGTGCTCCTCCTGCTCCAGTCACTTGCCTTCCATTACCAACCTTTGCAGTTCCAACTCCAGCTATGGATAAAATGGATACCGTTGAAAATGATCAACTACCGCTGGAGAAACAAAACACAGCTCTGCAAGATAAAAAAATGGCTTCAAAATCTCCAGCTTCATCATCCGACGATTCAGAAGAGACTGGAGTAACCAAGCTAAACGCTGGCTCAAAGACAAATGGTGACAAGGAGGAAGTTGTTGTTGATGCTGCTGCTGCTGCTGCTGCTTTGCATGATCCAAACGCTTCCCCAAAGAAAAAGCTGGTGGACCGCTCATCGTGTGGGTCAAACACACCTTCAGGGAGTGACGCGGAAACAGATGCCTTAGATAAGATGGAGAAAGATAACGAGGATGTGAAGGAGGCAGATGCAAACCAGCAGCCAAGTGTTATTGAGTTGAGCAACCGTCGGAGTAAAATCAGAGACAACAACAACAACCAAACTACTGATTCGTGGAAAGAAGTCTCCCAAGGGGTAAGCAAAAACAAAGAACAACATTTTGCAGAGAGTTTTTCTTTTGAAATTAACACTACAATCTTTGTTTCAGGGTCGTAAAGCGTTTCAGGCTCTCTTTGCAAGACAGAGATTGCCTCAGAGCTTTTCACCTCCTCAAGTGGCTGCAGAGAATGTGAATGGGAAGCAAAGTGACACGTCAATGCCGATGGCTCCTGATATCAACAAGATTCAAGATTCTTGTGATGCAGACCAAGAGAGTGGAGTAGTAATGATAGGTGATGGAACGGGGAAGAGCCTTAAAACGAGACAATCAGGGTTTAAGCCATACAAGAGATGTTCAATGGAGGCGAAAGAGAGCCAAGATGGGAACGCAAACAATGAAAGCGATGAAAAAGTCTGCAAGAGGATTCGATTGGAAGGAGAAGCTTCAACATAA
CDS Sequence
- >Bo5g002760
ATGGATACAAATACATCCGGAGATGAGTTATTAACCAAGGCAAGAAAGCCGTATACTATTACAAAGCAGCGGGAACGATGGACAGAGGATGAGCATGATAGGTTTCTTGAAGCCTTGAGGCTTTATGGAAGGGCCTGGCAACGTATAGAAGAACATATTGGGACAAAGACTGCTGTTCAGATCAGAAGTCATGCACAAAAGTTCTTCACAAAGCTGGAGAAAGAGGCAGAAGCTAAAGGCATTCCTGTTTGTCAAGCTCTCAACATAGAGATCCCACCTCCTCGTCCTAAAAGGAAACCCAATACTCCTTATCCTCGTAAACCTGGCAACAATGGCCCATCAGCAAAACTTGTATCCTCAGCCTCTTCTTCACAATGTAACCAGGCTTTCTTGGATTTGGAAACAGTGCCCATCTCTGAGGAAACATCAAATGGGAAAGAAAATCAAGATGATAACTGCTCAGGGGTTTCTACTGTAAACAAATGTCCCTTACCAAAGAAAGTTACTCAACCGTCTCTAAGAAAGGAAAGTGCCGATAATGGAACAAGTAAGGCGTCAAATGTGAACACTCAGTTTCATCCCCCAGGTATGGTCTCTCAAGACTTGATGTTTTGTCCTATGGGAGATCGTGTTCACGGGCACGTGAATCTTCCAGCTACCACAACATCATCTGCTACTACAACTACTTCTCAACAGGCGTTTCCTGCGTGCCCTTCCCACGATTCGTTTCTCCACTTCTCCTCTACTTTCCCCAATCTCATTATCTCAAGCCTCCTACAGAATCCTGCAGCTCATGCCGCAGCCACATTCGCTGCTTCGGTCTGGCCCTATTCCAACGTCGGGAACTCGGGAGGAGATTCATCAACGCAAATGAGCTCCTCTCCTCCAAGTATAGCTGCCATCGCTGCTGCTACGGTAGCTGCTGCAACTGCTTGGTGGGCTTCTCATGGACTTATTCCTGTATGTGCTCCTCCTGCTCCAGTCACTTGCCTTCCATTACCAACCTTTGCAGTTCCAACTCCAGCTATGGATAAAATGGATACCGTTGAAAATGATCAACTACCGCTGGAGAAACAAAACACAGCTCTGCAAGATAAAAAAATGGCTTCAAAATCTCCAGCTTCATCATCCGACGATTCAGAAGAGACTGGAGTAACCAAGCTAAACGCTGGCTCAAAGACAAATGGTGACAAGGAGGAAGTTGTTGTTGATGCTGCTGCTGCTGCTGCTGCTTTGCATGATCCAAACGCTTCCCCAAAGAAAAAGCTGGTGGACCGCTCATCGTGTGGGTCAAACACACCTTCAGGGAGTGACGCGGAAACAGATGCCTTAGATAAGATGGAGAAAGATAACGAGGATGTGAAGGAGGCAGATGCAAACCAGCAGCCAAGTGTTATTGAGTTGAGCAACCGTCGGAGTAAAATCAGAGACAACAACAACAACCAAACTACTGATTCGTGGAAAGAAGTCTCCCAAGGGGGTCGTAAAGCGTTTCAGGCTCTCTTTGCAAGACAGAGATTGCCTCAGAGCTTTTCACCTCCTCAAGTGGCTGCAGAGAATGTGAATGGGAAGCAAAGTGACACGTCAATGCCGATGGCTCCTGATATCAACAAGATTCAAGATTCTTGTGATGCAGACCAAGAGAGTGGAGTAGTAATGATAGGTGATGGAACGGGGAAGAGCCTTAAAACGAGACAATCAGGGTTTAAGCCATACAAGAGATGTTCAATGGAGGCGAAAGAGAGCCAAGATGGGAACGCAAACAATGAAAGCGATGAAAAAGTCTGCAAGAGGATTCGATTGGAAGGAGAAGCTTCAACATAA
Protein Sequence
- >Bo5g002760
MDTNTSGDELLTKARKPYTITKQRERWTEDEHDRFLEALRLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAEAKGIPVCQALNIEIPPPRPKRKPNTPYPRKPGNNGPSAKLVSSASSSQCNQAFLDLETVPISEETSNGKENQDDNCSGVSTVNKCPLPKKVTQPSLRKESADNGTSKASNVNTQFHPPGMVSQDLMFCPMGDRVHGHVNLPATTTSSATTTTSQQAFPACPSHDSFLHFSSTFPNLIISSLLQNPAAHAAATFAASVWPYSNVGNSGGDSSTQMSSSPPSIAAIAAATVAAATAWWASHGLIPVCAPPAPVTCLPLPTFAVPTPAMDKMDTVENDQLPLEKQNTALQDKKMASKSPASSSDDSEETGVTKLNAGSKTNGDKEEVVVDAAAAAAALHDPNASPKKKLVDRSSCGSNTPSGSDAETDALDKMEKDNEDVKEADANQQPSVIELSNRRSKIRDNNNNQTTDSWKEVSQGGRKAFQALFARQRLPQSFSPPQVAAENVNGKQSDTSMPMAPDINKIQDSCDADQESGVVMIGDGTGKSLKTRQSGFKPYKRCSMEAKESQDGNANNESDEKVCKRIRLEGEAST