Information report for Bo4g024840
Gene Details
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Functional Annotation
- Sequence suggests this encodes a MADS-box transcription factor. Negatively regulates the FLC/MAF clade genes and positively regulates FT in Arabidopsis.
Homologous
- Arabidopsis thaliana: AT2G45650.1
- Brassica napus: BnaC04G0060300ZS, GSBRNA2T00116722001, GSBRNA2T00006113001, GSBRNA2T00006114001, GSBRNA2T00011645001
- Brassica rapa: XP_009143157.1, Bra004927, XP_009133733.1, XP_009133732.1
- Raphanus raphanistrum: RrC6965_p3
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: A0A0D3BQ56
- RefSeq: XP_013634383.1
- AlphaFoldDB: A0A0D3BQ56
- KEGG: boe:106340061
- OMA: NFVQGWV
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- OrthoDB: A0A0D3BQ56
- SMR: A0A0D3BQ56
- CDD: cd00265
- eggNOG: KOG0014
- STRING: 109376.A0A0D3BQ56
- HOGENOM: CLU_053053_0_2_1
Sequences
gDNA Sequence
- >Bo4g024840
TGGGAAGAGGGAGAGTGGAGATGAAGAGGATAGAGAACAAAATCAATAGGCAAGTGACCTTCTCAAAAAGAAGAAATGGTTTGTTGAAGAAAGCTTATGAGCTCTCTGTTCTCTGTGATGCTGAAGTTGCTCTCATCGTCTTCTCTAGCCGTGGCAAGCTCTACGAGTTCGGCAGTGTCGGGTATATTTGCTCCTTTGCACGATCTTCTTCGCTCTTTATATTTCAATAAAGATAGGTTTCTTATAAAACTAAATGAATGGGCTCTTTTATCACTAGCTATATCGTACGAATACGATTAAAAAAAAATATGATCATGGCTTTATCTTGTGGGTATTCTTAAAGGTTGTGTCTTTTATCCTAAGGTAACTAGGGTTCATCGTTATACTTTATCTCTGTACTCTCTCTCTCTCTCTTAGATCAATTATCATAAGCCAATGTGTCCGTCCGTACGTTTTACTTTGTTGTTTGATTTTTTTTTTTTTTTGGATCTGGATTCTTTGGTCTTGAAGATGACAAACTCCAAATGGGTTAGGAAAAAAAACTAAATTAGGGTTTCCTTTCGTTGGTCTTTGTCGTAAGAAGAAACTCTAAACATAATTGAGCTAAAGATCTCTCGCGTGTAATAATCTTTTTAAATTTAATTTGCAGAGTTGAAAGAACTATTGAACGGTATCATCGTTGCTACAACTGTTCTGTGACCAATAATAGGCCTGAAGAGTCTAAACAGGCATGTATATACACGTACTTTAACTTTGGTTTATACAATAGATGATCTTGATTATATATTTATACAATATATAACGTTCACTTCAAATTCTCTTGCTACTATATGCTTTTCTATATAATTCTGTATTTCTATATGGTGCAGAACTGGTGTCAGGAGGTGGCAAAGCTGAAAGCCAAATACGAATCGCTTGTTCGCACTAATAGGTCTAGTAACAGTTTACTAAAGACTTCGAAGTTATATAGTAATCATGATCTTCTGCTATACATATTATATATATAACTGAATAGTTGACATGTGTTGATATTCATGCTAATTATCAAAGGCATTTGCTTGGAGAAGATATTGGAGAAATGGGCGTGAAGCAACTGCAAGCGTTGGAGCGGCAGCTGGAAGCAGCTCTTACTGCGACTCGACAACGGAAGGTTGTATCATATAGACCGGTTTTGTTTCATTTCCAATCATATGTTCATGAAGACTAAACCAAAATTAATCATGCAACTGATATATATGCAGACACAAGTTATGATGGAAGAAATGGAAGATCTTCGGAAAAAGGTAAGTTACATATAAATGTTACATAGCAAATTGATACATGTATTTTCATATATCAAACAATCTACTTTTGAAATGGTAGGAGCGGCAACTCGGAGACATAAACAAACAACTCAAGATTAAGGTTTTCACTTTAGGTCTCAAAATTATCATTTTTGTAGAAAAATAACTAAATCGTTTATGATTTTAATATGTTTGCCAATAGTTTGAAGCCGGAGGCCATGCTTTCAAATCCTTTCAAGACTTCTGGCCAAACTCGGCAGCATCGATGGCCGGTGATCCTAACAATTCTAAATTTCCGGTTCAGCCTTCTCATCCTGATTCAGTGGATTGCAACACCGAACCCTTTTTACAAATAGGGTACGTAACAATTTTCCATTTTTCTTCGTATTGTGAAAATGGATAGAAGTTATGTATTAATTATAAGACTAGTTTGGTACTTGTATACATTAGGTTCCAACAACATTACTACGTGCAAGGTGAAGGGTCTTCGGTACCAAAGAATAATGTGGCATGTGAGACTAATTTCGTCCAAGATTGGTTTCTTTGA
CDS Sequence
- >Bo4g024840
ATGGGAAGAGGGAGAGTGGAGATGAAGAGGATAGAGAACAAAATCAATAGGCAAGTGACCTTCTCAAAAAGAAGAAATGGTTTGTTGAAGAAAGCTTATGAGCTCTCTGTTCTCTGTGATGCTGAAGTTGCTCTCATCGTCTTCTCTAGCCGTGGCAAGCTCTACGAGTTCGGCAGTGTCGGAGTTGAAAGAACTATTGAACGGTATCATCGTTGCTACAACTGTTCTGTGACCAATAATAGGCCTGAAGAGTCTAAACAGAACTGGTGTCAGGAGGTGGCAAAGCTGAAAGCCAAATACGAATCGCTTGTTCGCACTAATAGGCATTTGCTTGGAGAAGATATTGGAGAAATGGGCGTGAAGCAACTGCAAGCGTTGGAGCGGCAGCTGGAAGCAGCTCTTACTGCGACTCGACAACGGAAGACACAAGTTATGATGGAAGAAATGGAAGATCTTCGGAAAAAGGAGCGGCAACTCGGAGACATAAACAAACAACTCAAGATTAAGTTTGAAGCCGGAGGCCATGCTTTCAAATCCTTTCAAGACTTCTGGCCAAACTCGGCAGCATCGATGGCCGGTGATCCTAACAATTCTAAATTTCCGGTTCAGCCTTCTCATCCTGATTCAGTGGATTGCAACACCGAACCCTTTTTACAAATAGGGTTCCAACAACATTACTACGTGCAAGGTGAAGGGTCTTCGGTACCAAAGAATAATGTGGCATGTGAGACTAATTTCGTCCAAGATTGGTTTCTTTGA
Protein Sequence
- >Bo4g024840
MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIVFSSRGKLYEFGSVGVERTIERYHRCYNCSVTNNRPEESKQNWCQEVAKLKAKYESLVRTNRHLLGEDIGEMGVKQLQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFEAGGHAFKSFQDFWPNSAASMAGDPNNSKFPVQPSHPDSVDCNTEPFLQIGFQQHYYVQGEGSSVPKNNVACETNFVQDWFL