Information report for Bo4g009360
Gene Details
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Functional Annotation
- Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA1 is a PHYA signaling intermediate, putative regulator of PHYA signaling pathway. Light responsive repressor of photomorphogenesis. Involved in regulating circadian rhythms and flowering time in plants. Under constant light, the abundance of SPA1 protein exhibited circadian regulation, whereas under constant darkness, SPA1 protein levels remained unchanged. In addition, the spa1-3 mutation slightly shortened circadian period of CCA1, TOC1/PRR1 and SPA1 transcript accumulation under constant light.
Homologous
- Arabidopsis thaliana: AT2G46340
- Brassica napus: BnaC04G0016300ZS, GSBRNA2T00074049001, GSBRNA2T00132884001, BnaA05G0015800ZS
- Brassica rapa: Brara.E00142, Bra004545
Gene Resources
- Pfam: PF00069 PF00400 PF07714 PF17005
- UniProt: A0A0D3BNU7
- AlphaFoldDB: A0A0D3BNU7
- OMA: NNHMESS
- InterPro: IPR000719 , IPR001680 , IPR011009 , IPR015943 , IPR036322 , IPR044630
- PANTHER: PTHR44218 , PTHR44218:SF6
- SUPFAM: SSF50978 , SSF56112
- PROSITE: PS50011 , PS50082 , PS50294
- Gene3D: 1.10.510.10 , 2.130.10.10
- eggNOG: KOG1033
- STRING: 109376.A0A0D3BNU7
- HOGENOM: CLU_006994_1_1_1
Sequences
gDNA Sequence
- >Bo4g009360
TGAATGCTATGGAACGAGTCGGTGAAGAAACGGTGGGGAGTAACAACGTGCAGTTGAAAGGACGAGTGGATGATGTTCCTACGGTGAATGAATCGGAGCCTGGAAGCTCAGCTCACAACGTTGTTGATATCGACAAGGCTCCGGAGGAAGCTAAGATCTCTGTTGAAGAGCTGACTTATAATAGAGCTGTTCAAGGGAGTAATAATAATAATAATAATAATCATATGGAGAGTTCTAGGGCTGGCAAGTTCGAGCATTTGTATCGTCTTGGATCTTCTGCGTTTAGAGGAGGAGCTGGAGATGGAGGAGGAGGAGGAGGAGATGTTGATTCTCAGCCACGTGATATGGATCAGATGCTGTCGAGGATTAGGCAGCAGCTCGCGGGAGCTCCTTCGGAGAGGCAAAACTTGATGAAGCCTTTTGTGAACAAGAGGAGCGATCAGAATCTGGAAGCTTTCTCCGAGCGTCTGAGAGCAGCTGGTGGAGAGAACAGCGTGGGGCCTGCGTGGATCAGCGACGGTGTCCAGTTGAAAACTCCGTTGGGTTCTTCGAGTTTTTCTCAGCTGATACTTAAAAGAGCTATGAAGGGGAAAGGTGTTGTTGGTAAAAACCAGGAAGCTCCTCCTCCTGAGTCGCCTATTGCTCATGATCCGTTGGCTGTAAAACCAATCCCCAAAGGTAATGGGGTTGTATCGCATGGTGAAGGGAACCATACTAACTCTTCTTCTTGTGGAATCAGTTTGAGGGAGTTTATTAGATCGAGTTATGGTAAACGAGAGAAACGACACAGCCTTTCTCTATTTAGGCAGCTGGTGGAGCTGATTGGCTCAGCACATTCGCAAGGATTGTTTTTGCTGGAACTGAGACCATCTCTTTTCGCTTTGGTCCCGTCGAAGAAACTTAGATATAATGGTACTTTCGGAAAGAGCAGTATAGAATCGGATGGTGACGAAGATTTGAATAGGAAGAGGCACGTGGTTCAGGAATCATCTCTTGTGGGTAGGGATTTGAAGAAAAGAAGAATGGATTTGAACGCTCCAGGGAATCAACTTCAGGCCACTTCAAGTGGGAGACCTTTGAAAAGGAAAAGCCCCTTGATTGATTTAAACGTGGTTGATGTGCGTAATCCAGACAGTTGTGAACTTCAACAGCAAAGCTATATGAAAAATTTAGGCGTGCCTTCAGTGACGAGAAAACAGTCTATGTCCACTTGGCTAGAAGAGCAATGGTATACTTGTCCAGAGGAAATAAATGGAGAAGATATCGGAGAGAAGTCAAATATATATTCCCTTGGTGTTCTTCTATTTGAGGTAAATATATATATCACCGGTTTTATAATAGTTGTGATATGACTTTTAGTGCTTATGTGTTTTACTTTCTTTCATTTTCTGTCTGTGTGCTAGTGGTTTAGGCTATGGGTAATTTCCATTTCATTTTTCAGTCTTCTCGTAATCGTGAAATTGCTTAGTATTTGCTGTGTAACTTGTCAGTTTTTAGGTTTGCTTGTTTGACCCTTTGATGTGAAGATGCTTACTGAAAGCTCTAGCTTGACCATGGTTGTTTCAGTTGCTATGCCATTGTGAGTCCAGTGAGATGCATGCTGCAATGATGGCGGATTTACGTCATCGGATTCTCCCACCAGCATTTCTCTCAAGATACCCAAAGGAAGCTGGATTTTGTCTTTGGCTTCTACATCCTGAGCCCTCCTCCCGACCAACAGCTAGGTATATAGACAGAAACTTATGGTAGAAGTCGTACAAAGGAGAATGCGTGGGCCCTGTACTTGAGTTTTCTTTTATATATATTACTACCTTAAATATATCAGATTTATTCAGTTGTCAAAGAGTCTTGAGTCGTCTATAAGATTTCTTTACTGGATGCCTTCAACTTGTTTTCCCTCATTGTTGTGAATATCCAGTGTGATATCACTGTAATTATCTTGTTGTTTCTTTATATGTTCTCAGTCTCTTCTTTTTCTTTGACAGAGAAATACTGAAGTCTGAGTTGATATGTGTGGAGGATTCAGTTAAATCGACCGCTGCTGATGAGGAGATATCTGAGCTGTTACTTCATTTTTTGTCTTCACTTGAAAAACAGAAGAAGAAAAATGCATCTAAGCTTTTGCAAGACATCCAAACCTTGGAGGATGATATCAAGGAGGCCGAGCGAAGATATTCTTCAAGAGCATCTCTGGTGAGATCTCACGAAGCTACTGAAAGAAAAGTGCAGTCATCTCCCATAGGCGAGGGCAGTACAACTACTTCTGGCGCCTTGTTTGTACCAACTGCTAATACAGACAGGCTGATGAGTAATATCCGTCAACTTGAAGATGCATATTTCATCATGAGATCACAAATGAAGTTATCGGATTCTACGGCTAGTGCCCGTTCTGACAAAAGCCTTCTAAAGGACAAGTGGTCTGAAAACCAAAATAAGGATCAGGATGCGAGAACCAAAGGAAAATCGTCAGATCAACTTGAAGTGTTTTTCGAGGGGTTGTGCAAATTTGCTCGGTATAGCAAGTTCGAAACCTGTGGAACAATCAGAAGTGGAGACCTTTTAAACTCCGCCAGTGTGGTCTGCTCATTGAGTTTTGACCCTGATGAGGAACACATAGCAGCTGCTGGGATATCAAAGAAAATCAAGATTTTTGACTTCAACGCATTTATGAATGAATCTGTCGGTGTTCATTATCCACTAGTAGAGATGGTCAACAAATCGAAATTAAGCTGCGTTTGCTGGAATAGTTACATCAAAAACTACTTGGCCTCGACTGACTATGACGGTGTAGTCCAGGTGCGTATGGAAATTTATGGTTTCTCCTGTCTATGTTACGCGGTAGGATCTATAGGACTAAAGCTCATGTACTCTTTATAAATGTTAATCATGTGATAATATTAGGTAAAAGAGCTGTATGAGTGACCGTGAAAATGCATCGGTCCTGGTTTTTAGCTGACATTTTCTTACTGTGTGGTGAATGCAGATATGGGATGCTGGGACTGGACAAGGATTTTCCCAATACACAGAACACCAGAAGAGAGCCTGGTCAGTTGATTTTTCTCCATCTGACCCGACGAAATTTGTCAGTGGAAGTGATGACTGTTCAGTAAAGCTTTGGAGCGTCAATGAGGCACGGTTCTTTCCCTTAGATCTCATAATACTGCTAGAATTTTTATTTTTATGTCCAAATTATTATATATAGCTCCAGAAAGTAATGGAACTTTATGACTATCCAAAAAGTAAACTTATATTCTTTTCTGGTGGCTATGCAGAAACGGTCATTAG
CDS Sequence
- >Bo4g009360
ATGAATGCTATGGAACGAGTCGGTGAAGAAACGGTGGGGAGTAACAACGTGCAGTTGAAAGGACGAGTGGATGATGTTCCTACGGTGAATGAATCGGAGCCTGGAAGCTCAGCTCACAACGTTGTTGATATCGACAAGGCTCCGGAGGAAGCTAAGATCTCTGTTGAAGAGCTGACTTATAATAGAGCTGTTCAAGGGAGTAATAATAATAATAATAATAATCATATGGAGAGTTCTAGGGCTGGCAAGTTCGAGCATTTGTATCGTCTTGGATCTTCTGCGTTTAGAGGAGGAGCTGGAGATGGAGGAGGAGGAGGAGGAGATGTTGATTCTCAGCCACGTGATATGGATCAGATGCTGTCGAGGATTAGGCAGCAGCTCGCGGGAGCTCCTTCGGAGAGGCAAAACTTGATGAAGCCTTTTGTGAACAAGAGGAGCGATCAGAATCTGGAAGCTTTCTCCGAGCGTCTGAGAGCAGCTGGTGGAGAGAACAGCGTGGGGCCTGCGTGGATCAGCGACGGTGTCCAGTTGAAAACTCCGTTGGGTTCTTCGAGTTTTTCTCAGCTGATACTTAAAAGAGCTATGAAGGGGAAAGGTGTTGTTGGTAAAAACCAGGAAGCTCCTCCTCCTGAGTCGCCTATTGCTCATGATCCGTTGGCTGTAAAACCAATCCCCAAAGGTAATGGGGTTGTATCGCATGGTGAAGGGAACCATACTAACTCTTCTTCTTGTGGAATCAGTTTGAGGGAGTTTATTAGATCGAGTTATGGTAAACGAGAGAAACGACACAGCCTTTCTCTATTTAGGCAGCTGGTGGAGCTGATTGGCTCAGCACATTCGCAAGGATTGTTTTTGCTGGAACTGAGACCATCTCTTTTCGCTTTGGTCCCGTCGAAGAAACTTAGATATAATGGTACTTTCGGAAAGAGCAGTATAGAATCGGATGGTGACGAAGATTTGAATAGGAAGAGGCACGTGGTTCAGGAATCATCTCTTGTGGGTAGGGATTTGAAGAAAAGAAGAATGGATTTGAACGCTCCAGGGAATCAACTTCAGGCCACTTCAAGTGGGAGACCTTTGAAAAGGAAAAGCCCCTTGATTGATTTAAACGTGGTTGATGTGCGTAATCCAGACAGTTGTGAACTTCAACAGCAAAGCTATATGAAAAATTTAGGCGTGCCTTCAGTGACGAGAAAACAGTCTATGTCCACTTGGCTAGAAGAGCAATGGTATACTTGTCCAGAGGAAATAAATGGAGAAGATATCGGAGAGAAGTCAAATATATATTCCCTTGGTGTTCTTCTATTTGAGTTGCTATGCCATTGTGAGTCCAGTGAGATGCATGCTGCAATGATGGCGGATTTACGTCATCGGATTCTCCCACCAGCATTTCTCTCAAGATACCCAAAGGAAGCTGGATTTTGTCTTTGGCTTCTACATCCTGAGCCCTCCTCCCGACCAACAGCTAGAGAAATACTGAAGTCTGAGTTGATATGTGTGGAGGATTCAGTTAAATCGACCGCTGCTGATGAGGAGATATCTGAGCTGTTACTTCATTTTTTGTCTTCACTTGAAAAACAGAAGAAGAAAAATGCATCTAAGCTTTTGCAAGACATCCAAACCTTGGAGGATGATATCAAGGAGGCCGAGCGAAGATATTCTTCAAGAGCATCTCTGGTGAGATCTCACGAAGCTACTGAAAGAAAAGTGCAGTCATCTCCCATAGGCGAGGGCAGTACAACTACTTCTGGCGCCTTGTTTGTACCAACTGCTAATACAGACAGGCTGATGAGTAATATCCGTCAACTTGAAGATGCATATTTCATCATGAGATCACAAATGAAGTTATCGGATTCTACGGCTAGTGCCCGTTCTGACAAAAGCCTTCTAAAGGACAAGTGGTCTGAAAACCAAAATAAGGATCAGGATGCGAGAACCAAAGGAAAATCGTCAGATCAACTTGAAGTGTTTTTCGAGGGGTTGTGCAAATTTGCTCGGTATAGCAAGTTCGAAACCTGTGGAACAATCAGAAGTGGAGACCTTTTAAACTCCGCCAGTGTGGTCTGCTCATTGAGTTTTGACCCTGATGAGGAACACATAGCAGCTGCTGGGATATCAAAGAAAATCAAGATTTTTGACTTCAACGCATTTATGAATGAATCTGTCGGTGTTCATTATCCACTAGTAGAGATGGTCAACAAATCGAAATTAAGCTGCGTTTGCTGGAATAGTTACATCAAAAACTACTTGGCCTCGACTGACTATGACGGTGTAGTCCAGATATGGGATGCTGGGACTGGACAAGGATTTTCCCAATACACAGAACACCAGAAGAGAGCCTGGTCAGTTGATTTTTCTCCATCTGACCCGACGAAATTTGTCAGTGGAAGTGATGACTGTTCAGTAAAGCTTTGGAGCGTCAATGAGGCACGAAACGGTCATTAG
Protein Sequence
- >Bo4g009360
MNAMERVGEETVGSNNVQLKGRVDDVPTVNESEPGSSAHNVVDIDKAPEEAKISVEELTYNRAVQGSNNNNNNNHMESSRAGKFEHLYRLGSSAFRGGAGDGGGGGGDVDSQPRDMDQMLSRIRQQLAGAPSERQNLMKPFVNKRSDQNLEAFSERLRAAGGENSVGPAWISDGVQLKTPLGSSSFSQLILKRAMKGKGVVGKNQEAPPPESPIAHDPLAVKPIPKGNGVVSHGEGNHTNSSSCGISLREFIRSSYGKREKRHSLSLFRQLVELIGSAHSQGLFLLELRPSLFALVPSKKLRYNGTFGKSSIESDGDEDLNRKRHVVQESSLVGRDLKKRRMDLNAPGNQLQATSSGRPLKRKSPLIDLNVVDVRNPDSCELQQQSYMKNLGVPSVTRKQSMSTWLEEQWYTCPEEINGEDIGEKSNIYSLGVLLFELLCHCESSEMHAAMMADLRHRILPPAFLSRYPKEAGFCLWLLHPEPSSRPTAREILKSELICVEDSVKSTAADEEISELLLHFLSSLEKQKKKNASKLLQDIQTLEDDIKEAERRYSSRASLVRSHEATERKVQSSPIGEGSTTTSGALFVPTANTDRLMSNIRQLEDAYFIMRSQMKLSDSTASARSDKSLLKDKWSENQNKDQDARTKGKSSDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSVNEARNGH