Information report for Bo4g006970
Gene Details
|
|
Functional Annotation
- Pseudo-response regulator PRR9. Involved in clock function. PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR9. Interact with TOC1 in a yeast two-hybrid assay. Acts as transcriptional repressor of CCA1 and LHY.
Homologous
- Brassica napus: BnaC04G0011800ZS, BnaA05G0011400ZS, BnaA04G0295200ZS, BnaC04G0612700ZS, BnaA09G0067500ZS, BnaC02G0515600ZS
- Brassica rapa: Bra004507, Bra040484, Bra036517, Bra002512
- Gossypium hirsutum: Gohir.A11G101100, Gohir.D11G105700
- Manihot esculenta: MANES_05G016200
- Populus trichocarpa: POPTR_002G179800v3
Gene Resources
- Pfam: PF06203 PF00072
- UniProt: A0A0D3BNQ6
- RefSeq: XP_013636162.1
- AlphaFoldDB: A0A0D3BNQ6
- KEGG: boe:106341950
- OMA: PRRMTCS
- InterPro: IPR001789 , IPR010402 , IPR011006 , IPR045279
- PANTHER: PTHR43874 , PTHR43874:SF146
- SUPFAM: SSF52172
- PROSITE: PS50110 , PS51017
- Gene3D: 3.40.50.2300
- OrthoDB: A0A0D3BNQ6
- CDD: cd17582
- eggNOG: KOG1601
- STRING: 109376.A0A0D3BNQ6
- HOGENOM: CLU_041215_0_0_1
Sequences
gDNA Sequence
- >Bo4g006970
TATTTAGACGCATCTGAGTTCACTGCACGCACAAACTGCCCTTTCACTCGTGGACGCTGCTCTGCTAGCTTCTTCCTGCTCTGATACCTTACCTTTTTGTCAAAGCATCGATCTTTCCTCTTCAACCGGAACTTCAACAACGCAGCTTCTCTCTGACTCCGACGTTGCTCCTGAACACTCAGACCACAACCTTCTTCTTCTTGTTCCTTTCCTTTCACATCATTGGTGCTTTCAGAACCAACTTGGTTACGGAAGCTTAACTCATTTTGTCCGCTTAAACTTGATGATCCCATGTACTCATGGTTGCTGCTCGTTGTAGCGCTTCCGTGATCACATCTTAACAGCTTCTCATGTGATTCACTTGGTGTCTTGGGCTCAGCTGAGCTACTCGGCTCTACACCAACCTCTGCTTTCTCTGCCGCCTGGCTGTTCTCATATCTACAAGTTAATGTAATAATGCCTACTGATTCATCGGAGAGGCTAAGCTTTTGTTGCTTGCTTTGATCTTGCTTCTCGAAACTTCCAGAGCAAGATCTTTTCAGAGAAAGACCAAGCTCCGGACCAACATACTCATCACGAGCGTTGTCTCCGTAGAAGCACTCAGACCGTTTGTCAATTCCACCGATCAAATCCATTGTCACATCCTCCATTAGCTTATTGTTACCGTTGCAGCTTGTTGCAGCCTGAGGACCACTTCCTTGATCTGAATGATCTGCACTAGTTTCATCACTATCTTCAACGTTCTGCTGAGAAGCTGGTAAGCTAAGACCATGACCATTGTGACCATCACGCAGCTGATTATTCATAACCCAAAAAAACACAAAATAATAAGTCTTCCATACTTTTAAAAAAACCAAACAAAATTAGAAACATTAAACTTACAGTAAGTCTTCTCCAGACATGTTGCCATAGATTCTTCAACTCGTTTTTCCTCATGGGTTTAATCAGATAATCAGCAGCGCCTTTAAGCATACACTTCAACACCATCGTCATCGAATCTTGCGACGACATCACTAAAAAACAAATAAAATCATCAGAACAACAAAGACTAAAGATTACAAAAGATAATAAAGAACGGACTTTGAGGGGATCACCATCGTACTTATGACAGGAATGTTCTTGCAAGCTTCATGCTCCATAACCAAAGCGAGGAGAGCAAAACCAGATATAGCTGGCAAATCAAGCTCCGTCAGTATAAGGTCAATCTCATGTGACTTCTCCTTTAGAGTCTCCCACGCAGCTAAACCATCGGACACAGCTATAACTGTTTTTGAAAATTCAAAATCAGACAAGACAAAGATGGAAACTTTTAAAACATTACTATAAAAACAGAGTAAAGTAATGACCTTTGTAAGAGCAGTTCCGAAGAAGGGCGGTGATGATTTGACGAGTTGAGTCGTCGGACTCGACGAGTAAAACCTTAAGCACCGTTTTGGGAAGGTACTTCTCCCACCGGACAACCTCCGACGACTTGATTCTGTTCATCATCGTCTCCGCCAT
CDS Sequence
- >Bo4g006970
ATGGCGGAGACGATGATGAACAGAATCAAGTCGTCGGAGGTTGTCCGGTGGGAGAAGTACCTTCCCAAAACGGTGCTTAAGGTTTTACTCGTCGAGTCCGACGACTCAACTCGTCAAATCATCACCGCCCTTCTTCGGAACTGCTCTTACAAAGTTATAGCTGTGTCCGATGGTTTAGCTGCGTGGGAGACTCTAAAGGAGAAGTCACATGAGATTGACCTTATACTGACGGAGCTTGATTTGCCAGCTATATCTGGTTTTGCTCTCCTCGCTTTGGTTATGGAGCATGAAGCTTGCAAGAACATTCCTGTCATAATGATGTCGTCGCAAGATTCGATGACGATGGTGTTGAAGTGTATGCTTAAAGGCGCTGCTGATTATCTGATTAAACCCATGAGGAAAAACGAGTTGAAGAATCTATGGCAACATGTCTGGAGAAGACTTACTCTGCGTGATGGTCACAATGGTCATGGTCTTAGCTTACCAGCTTCTCAGCAGAACGTTGAAGATAGTGATGAAACTAGTGCAGATCATTCAGATCAAGGAAGTGGTCCTCAGGCTGCAACAAGCTGCAACGGTAACAATAAGCTAATGGAGGATGTGACAATGGATTTGATCGGTGGAATTGACAAACGGTCTGAGTGCTTCTACGGAGACAACGCTCGTGATGAGTATGTTGGTCCGGAGCTTGGTCTTTCTCTGAAAAGATCTTGCTCTGGAAGTTTCGAGAAGCAAGATCAAAGCAAGCAACAAAAGCTTAGCCTCTCCGATGAATCAGTAGGCATTATTACATTAACTTGTAGATATGAGAACAGCCAGGCGGCAGAGAAAGCAGAGGTTGGTGTAGAGCCGAGTAGCTCAGCTGAGCCCAAGACACCAAGTGAATCACATGAGAAGCTGTTAAGATGTGATCACGGAAGCGCTACAACGAGCAGCAACCATGAGTACATGGGATCATCAAGTTTAAGCGGACAAAATGAGTTAAGCTTCCGTAACCAAGTTGGTTCTGAAAGCACCAATGATGTGAAAGGAAAGGAACAAGAAGAAGAAGGTTGTGGTCTGAGTGTTCAGGAGCAACGTCGGAGTCAGAGAGAAGCTGCGTTGTTGAAGTTCCGGTTGAAGAGGAAAGATCGATGCTTTGACAAAAAGGTAAGGTATCAGAGCAGGAAGAAGCTAGCAGAGCAGCGTCCACGAGTGAAAGGGCAGTTTGTGCGTGCAGTGAACTCAGATGCGTCTAAATAA
Protein Sequence
- >Bo4g006970
MAETMMNRIKSSEVVRWEKYLPKTVLKVLLVESDDSTRQIITALLRNCSYKVIAVSDGLAAWETLKEKSHEIDLILTELDLPAISGFALLALVMEHEACKNIPVIMMSSQDSMTMVLKCMLKGAADYLIKPMRKNELKNLWQHVWRRLTLRDGHNGHGLSLPASQQNVEDSDETSADHSDQGSGPQAATSCNGNNKLMEDVTMDLIGGIDKRSECFYGDNARDEYVGPELGLSLKRSCSGSFEKQDQSKQQKLSLSDESVGIITLTCRYENSQAAEKAEVGVEPSSSAEPKTPSESHEKLLRCDHGSATTSSNHEYMGSSSLSGQNELSFRNQVGSESTNDVKGKEQEEEGCGLSVQEQRRSQREAALLKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRAVNSDASK