Information report for Bo4g006930
Gene Details
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Functional Annotation
- Encodes a transcriptional repressor that performs overlapping functions with LHY in a regulatory feedback loop that is closely associated with the circadian oscillator of Arabidopsis. Binds to the evening element in the promoter of TOC1 and represses TOC1 transcription. CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis.;MYB transcription factor MYB114, LATE ELONGATED HYPOCOTYL 2 gene b
Homologous
- Arabidopsis thaliana: AT2G46830.1
- Brassica napus: BnaC04G0011300ZS, GSBRNA2T00073198001, BnaA05G0011000ZS, GSBRNA2T00132937001
- Brassica rapa: XP_009142594.1, Bra004503, XP_009142593.1
- Raphanus raphanistrum: RrC3039_p4
Gene Resources
- Pfam: PF00249
- UniProt: A0A0D3BNQ2
- RefSeq: XP_013637508.1 , XP_013637509.1
- AlphaFoldDB: A0A0D3BNQ2
- OMA: HTCAATE
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017884 , IPR017930
- PANTHER: PTHR12802 , PTHR12802:SF177
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS51293 , PS51294
- Gene3D: 1.10.10.60
- SMR: A0A0D3BNQ2
- CDD: cd00167
- eggNOG: KOG0724
- STRING: 109376.A0A0D3BNQ2
- HOGENOM: CLU_025358_0_0_1
Sequences
gDNA Sequence
- >Bo4g006930
CATGTTGAAGTTTGAGTTTCCAACCTAATCCGCTTAGGATCTTTCTGTTCAACACTGATGATAGGATTGGTGTTGTTGATGACTCTACTTTCTTTGGCTTCCATTGAACATCTTTTGTAAGGCTTGAAACCTGTTCTCCCTCTACTTAGCTGCTGCTTTGAAGCACCCAAAAACGCTATGTTTCTGTTCTCTTCTTGATCATCAGCTGTGGAGTTAAGATCAAGCTCCATTGGATAACTTTGTTGTTGGCCCTCCTCTCTCTGATATGTAAAACTTTGTGGCAAAACTTCTCTTGCAAAGAGAGCTCTAAAAGCAATTCGTCCCTGAAAAAAATACAAAATATTTTGGTGAATAAACGATTTTAAATAAAAGGAAGTTTTGAATCTTTTTTCGTTTTAAGTACCTCATCTGAAACAGACTTCCATGGATCAGCTAAGATAGAGCTACTGATTCTACTGCGTCGCGCATTAGATTCTGAAGTTTGTGGGTTGTTAGTAGTGTCCCCATCCACTTCTTTCACTTCCTCATTGGTGGTGCCACCATTCTCTTGCCTCTCCACCAAAGCATCAGCCTCAACATCGTCACTACTCGAGGGAGTGTTCGAGCCACAAGAAGACCTGTCAACTTGTTTCCTATCTCTCGCTCCATCTGATCCCTTTGCATCAGTCTCAGTCGCTGCACAAGTATGATGATGACAATCTGGTTGACTCCCATTTTTAGTCTCCTCTGATTCCAACGAAGACCGAGCCTTTGAAGCCTCGGAGTGTTCTTGATCCATTGTTTTTGTGAGGGCGTTTACTTCATAAGTAGTTGGAGGGTTGCCTGAACTAAAAGGAGGAGCGCAGAGTGGGAGCATCCCATTGGCGGCCCACCAAGCACTTGCAGCTGCAACGGTGGCTGCAGCCATGGCAGCCAAGTTCCCTTGTGGGCCGCCACCAAACGTTGAGGCAAAAGATGCAGCTGTATAGAGAGCTGGTGTTTGTAAAAGGGTCGACATGATATGTTCAGGAAAGGACTGATGACTAGTCTCGTCTGGCTGTGAAGGAGGAGCATGTGACAGAGACGTTGTACCCAATGGAACTAGCAGAGGGATATGCGTTGGATAAGTGTGAGGTCCTCCTGCCTCTATATTCAAATCACTGTAGTTTGACTCCTTGTTATTCCCCTGTTCCTTCCCTCCCATATAGTTTCATGAAAAGTACATTTAAAACCTCAAATAGCAATTGTAAGATTGTTTCTAACCTGTTCCCGTGAAGGTAAGAACTCTAGAAAAGTGCTTGCGTTTGATGCAGCAGAGAGGTGTTGATGAGTGAGACAGTCTGAGCAGTTGTCTTCCTGCGGATCTTCACTGGCCGTCTGAAAAAACAAAGCATACAATCTGTATCAATTACATTGACATACTACAACAAGATGTCTTTGATTGACCAGTAAGTTCACCTCAGGAAGAGAAGCTTTTGCTGATCCAAGGGACTCTTTTGCATCGTTCAGACCCGTTTTAGAGATGGGGAGAGATCCAGTTCCGGTCTTTCGAGGATAAGGATTGTTTGGTTTACGTTTAGGGCGTGGAGGAGGAATAGCTATGTCTAGCGTTTGAGCCACTGGTACACCTTTAGCTTCAGCCTCTTTCTCTACCTGAGAGATGAGAAATTAGTCTTGTTACCCTCTAGACAAACAAAAAAAAATCTATTGGGATCTAATGAAACTAGTAAGAACTTAAAATGAAAATGAAAATTGTTAACTCTATGGCTTATCACAAAGAACAATAAACATATCCTGCCACTAACTCAGAATCGGTAAGACTTCTAATAAGGAAGAATTTTTTATATTCATTATGTGTGAAATCGGTTTATATTGCTAAAATTCCAAATTTTCAATAGAAACTAAACATTCTTCTGAAGATACTAACCATACAACATATATGCATAACAGCCAAACAAATGATCACACTCTTTATCTCAACTACCTTGTTACCTCATCTCTAATTATTTCTCCAACTATCTTATAGCTCACATACGCAAGCTATCTCTTAACAAAAGCAAGAAGCAGAAAGACTTGCATGTCTGTCACAACAGTAGTTCAAATAAACCAAATTCAAAGTTATTACCTTGGAGAAAAATTTCTGAGCATGGCTTCTAATCTGCACAGCAGTTTTCGTTGCTACATGTTCTGTCCAAATGATGAAAAATCAAATCAGTTTGAAGAAACAAAGCAAAAAGAGCCACATCTACAAGACAAGAACATTTCTTAGAAAAAACAACCTTCTATCTTTTGCCAAGCTCTACCGTAAAGCCTCAAGGCATCAAGGAACCTATTATGTTCTTCCTCAGTCCATCTTTCACGTTGCTTTGTTATCGTATACGGCTTCCTCGTCTAATATTAATTTTTTTTTATTACAACAAACAAACAAAAAAAAAAAAACACAAAAGTTTCCATCTTTGTTTTTCAAAAAAAAAAAAGTTTCCATCATTTGGTCTTTCACCTTAACCAACATTAGCCTACTAAAATTTAAAATTATAGTTACCTTAACAACCAGATCTTCTCCAGACGAATTTGTCTCCAT
CDS Sequence
- >Bo4g006930
ATGGAGACAAATTCGTCTGGAGAAGATCTGGTTGTTAAGACGAGGAAGCCGTATACGATAACAAAGCAACGTGAAAGATGGACTGAGGAAGAACATAATAGGTTCCTTGATGCCTTGAGGCTTTACGGTAGAGCTTGGCAAAAGATAGAAGAACATGTAGCAACGAAAACTGCTGTGCAGATTAGAAGCCATGCTCAGAAATTTTTCTCCAAGGTAGAGAAAGAGGCTGAAGCTAAAGGTGTACCAGTGGCTCAAACGCTAGACATAGCTATTCCTCCTCCACGCCCTAAACGTAAACCAAACAATCCTTATCCTCGAAAGACCGGAACTGGATCTCTCCCCATCTCTAAAACGGGTCTGAACGATGCAAAAGAGTCCCTTGGATCAGCAAAAGCTTCTCTTCCTGAGACGGCCAGTGAAGATCCGCAGGAAGACAACTGCTCAGACTGTCTCACTCATCAACACCTCTCTGCTGCATCAAACGCAAGCACTTTTCTAGAGTTCTTACCTTCACGGGAACAGGGGAATAACAAGGAGTCAAACTACAGTGATTTGAATATAGAGGCAGGAGGACCTCACACTTATCCAACGCATATCCCTCTGCTAGTTCCATTGGGTACAACGTCTCTGTCACATGCTCCTCCTTCACAGCCAGACGAGACTAGTCATCAGTCCTTTCCTGAACATATCATGTCGACCCTTTTACAAACACCAGCTCTCTATACAGCTGCATCTTTTGCCTCAACGTTTGGTGGCGGCCCACAAGGGAACTTGGCTGCCATGGCTGCAGCCACCGTTGCAGCTGCAAGTGCTTGGTGGGCCGCCAATGGGATGCTCCCACTCTGCGCTCCTCCTTTTAGTTCAGGCAACCCTCCAACTACTTATGAAGTAAACGCCCTCACAAAAACAATGGATCAAGAACACTCCGAGGCTTCAAAGGCTCGGTCTTCGTTGGAATCAGAGGAGACTAAAAATGGGAGTCAACCAGATTGTCATCATCATACTTGTGCAGCGACTGAGACTGATGCAAAGGGATCAGATGGAGCGAGAGATAGGAAACAAGTTGACAGGTCTTCTTGTGGCTCGAACACTCCCTCGAGTAGTGACGATGTTGAGGCTGATGCTTTGGTGGAGAGGCAAGAGAATGGTGGCACCACCAATGAGGAAGTGAAAGAAGTGGATGGGGACACTACTAACAACCCACAAACTTCAGAATCTAATGCGCGACGCAGTAGAATCAGTAGCTCTATCTTAGCTGATCCATGGAAGTCTGTTTCAGATGAGGGACGAATTGCTTTTAGAGCTCTCTTTGCAAGAGAAGTTTTGCCACAAAGTTTTACATATCAGAGAGAGGAGGGCCAACAACAAAGTTATCCAATGGAGCTTGATCTTAACTCCACAGCTGATGATCAAGAAGAGAACAGAAACATAGCGTTTTTGGGTGCTTCAAAGCAGCAGCTAAGTAGAGGGAGAACAGGTTTCAAGCCTTACAAAAGATGTTCAATGGAAGCCAAAGAAAGTAGAGTCATCAACAACACCAATCCTATCATCAGTGTTGAACAGAAAGATCCTAAGCGGATTAGGTTGGAAACTCAAACTTCAACATGA
Protein Sequence
- >Bo4g006930
METNSSGEDLVVKTRKPYTITKQRERWTEEEHNRFLDALRLYGRAWQKIEEHVATKTAVQIRSHAQKFFSKVEKEAEAKGVPVAQTLDIAIPPPRPKRKPNNPYPRKTGTGSLPISKTGLNDAKESLGSAKASLPETASEDPQEDNCSDCLTHQHLSAASNASTFLEFLPSREQGNNKESNYSDLNIEAGGPHTYPTHIPLLVPLGTTSLSHAPPSQPDETSHQSFPEHIMSTLLQTPALYTAASFASTFGGGPQGNLAAMAAATVAAASAWWAANGMLPLCAPPFSSGNPPTTYEVNALTKTMDQEHSEASKARSSLESEETKNGSQPDCHHHTCAATETDAKGSDGARDRKQVDRSSCGSNTPSSSDDVEADALVERQENGGTTNEEVKEVDGDTTNNPQTSESNARRSRISSSILADPWKSVSDEGRIAFRALFAREVLPQSFTYQREEGQQQSYPMELDLNSTADDQEENRNIAFLGASKQQLSRGRTGFKPYKRCSMEAKESRVINNTNPIISVEQKDPKRIRLETQTST