Information report for Bo3g175710
Gene Details
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Functional Annotation
- Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.
Homologous
- Brassica napus: BnaC03G0774400ZS, BnaA08G0156000ZS, BnaA01G0071400ZS, BnaC01G0084500ZS, BnaA03G0516300ZS, BnaC07G0495000ZS
- Brassica rapa: Bra010297, Bra011173, Bra024097
- Gossypium hirsutum: Gohir.A05G004280, Gohir.D08G030100, Gohir.D05G005000, Gohir.A08G019500
- Manihot esculenta: MANES_S055500
Gene Resources
- Pfam: PF07227
- UniProt: A0A0D3BM80
- RefSeq: XP_013629451.1
- AlphaFoldDB: A0A0D3BM80
- KEGG: boe:106335472
- OMA: DRVSMKR
- InterPro: IPR003961 , IPR013783 , IPR032881 , IPR036116 , IPR044514
- PANTHER: PTHR46286 , PTHR46286:SF2
- SUPFAM: SSF49265
- PROSITE: PS50853
- Gene3D: 2.60.40.10
- OrthoDB: A0A0D3BM80
- CDD: cd00063 , cd15521
- eggNOG: ENOG502QR8D
- STRING: 109376.A0A0D3BM80
- HOGENOM: CLU_016873_0_0_1
Sequences
gDNA Sequence
- >Bo3g175710
TGGATTCTTCTCTCGATGGTACTTTTTAACGTAACGATTCCGTGTTTCATTCGTTTGCTTAAAGATGTATCGAACTCCGTGTCTCTTTGTTCTTCTCTCTAAAGTTGTGTTTTTTTTTTTTAATTCAATTTATCTCAAAGTTTGAGACTTTATTATTTCACTAATCTGCTTCTGATCTAGACTGCTAGCTTCTTTTATGTTTTTTTTTTCTCGTTGGTGATTATGTCTTCACTTTTTTCTTGTTGATTGGTTCTATGTTTTCCTCCCACTATCAATTTGGGTGCTTTCTTTAATATAATCGTGCGTCAAATGACTACCGAATAAGATTCCATGAGATGTCACTACTCTTTAACTTATTTATAAAAAAAAGGATCCTGCTTTGATTTTATTCTCTTAACTTAACCACTTAGTCTTTGATGGGTCTTGGACCTTTTTGCTTTTGGATCTTGTTCCATTCCCAAAGAAACATCATCCTTTTTGCCTCTTTCATCCTCTCTGATGTCTGTTGCATTGTGGTGTTGACTTGTAATGGTAGCTGAGGCAGATTCTTTTGTATTAATCTTTAGATGATGTTGTGTGTGTGTGTGTTTTTGGATACGACATTGTTCTCCATTGCCTTTTGACTTCCCTTTTCATCTATACACAGGAGCTGCGGGTGACTCATCGAAATGCAGTGAGATGAGTGTTGAAGAGAAGAGACAGCTCGTTTACGAGCTGTCAAAGCAATCATCACATCTAGCTCCTGAAGTGTTGCAGGCATGGAGCCGCCAAGAGATTCTGCAGATCTTATGCGCTGAGATGGGGAAAGAGAGAAAATACACCGGCCTGACCAAAGTCAAGATCATCGAGACTCTTATGAAGATTGTGTCCGAGAAAAACGCTGGAGAGTGTGATGAGAACAAGAAGAAGAGAGATTCTGATTGTTGTTTGCCTGTTCAGAGAAGCGCAAAGAGGCCAAGGAAGGTCGACAACCCTACTCGCTACGTGGCTCCAACGAGTAACAACAATGCCTCAGGTGAGGAGAAGACTACGTACTGCAACAACTTGGCTTGCAGGGCTGTAATGAGACAGGGAGACACGTTTTGCAGGAGGTGTTCTTGTTGCATTTGTCGTAAGTACGATGAAAACAAAGATCCTAGTCTCTGGTTGACTTGCAGCTCAGATTCTCCGTTTGAAGGTGGTTCCTGCGGATCTTCGTGTCATCTCGAATGTGCTTTCGAGAGCGAAAAGTCCGGTCTGGCAAAGCGAAGCGAGGAGTGCTGCTTTTACTGCGTCTCTTGCGGTAAGCCAAACAGCTTGCTTGAGTGTTGGAAGAAGCAGCTGACGATTGCTAAAGAAGCCAGGAGGGTGGACATACTCTGCTACCGTCTCTTACTAGTCCAGAAACTTGTGAAGGGATCGAGTAAATATCGAAATGTATGTGAGGCTGTGGAGAAAGCTGTGAAGTGTCTTGAAGCTGATGTGGGCCCTCTCACGATGAAGATGGGTAGAGGGATTGTAAACAGACTAAACTCAGGACCTGACGTGCAGAAGCTTTGCTCTTCTGCTCTTGAATCTCTTCAAACACTTGAAACTAAACCTCCTGAAGTTGCTGCATTGCCTTCTCCTCGCAGCTCTAAGTGGTTGAGCAATGAGATATCTGCAGATACAGCAACCACAGTACCACCAACCAAGATCAGATTCGAGGATGTTAATGCGACTTCACTCACGGTGATTCTAGCATCCAGCGAAGTCGCCTCGCCTGCAAACATTGTTCATTACAGCATTTGGCATCGTAAGGTCACTGAGAAAGAGTACCAAGAGAAGTCTACTTGCACGTTGTTCACTCCAAACGCGAGATTCGTCGTCTCAGGACTAGCTCCGGCGTCTGAGTACTGCTTCAAGGTTGTGTCCTTTAGCGGAACACGAGAGCTGGGAGTCGATGTGATCAAGGTTTTGACGCGTGGCCCTGAAGAAAGAAGCGAGAGCCCTCTCACAAACTGTAGCACATTGTCTTCTAACCCTTCTTCTGCTGAAGCTGAGTCCAACAACGGCAAGAAAGACTCTCCGTCGACCGAGGAAAATGCTGCGAAAAGGACTGTTGAACCAGACCTTGTGGAGGCCGAGAAGAACGTTGAAGGGGTTGTGTTGTCGGATGAGGTGGAGGAAGAAGCTGTTCAGGACAAGAACGTCGCGGTTACTACAACTAATGGAAACAGTTCTCCAGTTACTCCCTTTAAGTCAGACCAAACCAAGAACCGTCAAGTGAGAAACAAGAAGTTAGTTAAAGATAACGGTAATAACGGAGATCATCATTCAGCAAACGGAGGAGCAGAGAGTGGACTAGAGCATTGTGTGAAGATCATAAGGCAGCTCGAGTGTTCAGGTCACATTGAGAAAGACTTCAGGCAAAAGTTTTTGACTTGGTATAGCTTAAGAGCCACGCCACAAGAGAGCAGAGTTGTGAAGATATTCATTGATACGTTTACTGATGATCCCGTGGCTTTAGCTGAGCAGCTCGTTCATACTTTCAGCGACCGCGTTTCGATGAAGCGTTCTGCGATTGGTGGTGGTGCGTCTGCGGTTGTTCAGTCTGGATTCTGCATGAAGTTGTGGCATTAG
CDS Sequence
- >Bo3g175710
ATGGATTCTTCTCTCGATGGAGCTGCGGGTGACTCATCGAAATGCAGTGAGATGAGTGTTGAAGAGAAGAGACAGCTCGTTTACGAGCTGTCAAAGCAATCATCACATCTAGCTCCTGAAGTGTTGCAGGCATGGAGCCGCCAAGAGATTCTGCAGATCTTATGCGCTGAGATGGGGAAAGAGAGAAAATACACCGGCCTGACCAAAGTCAAGATCATCGAGACTCTTATGAAGATTGTGTCCGAGAAAAACGCTGGAGAGTGTGATGAGAACAAGAAGAAGAGAGATTCTGATTGTTGTTTGCCTGTTCAGAGAAGCGCAAAGAGGCCAAGGAAGGTCGACAACCCTACTCGCTACGTGGCTCCAACGAGTAACAACAATGCCTCAGGTGAGGAGAAGACTACGTACTGCAACAACTTGGCTTGCAGGGCTGTAATGAGACAGGGAGACACGTTTTGCAGGAGGTGTTCTTGTTGCATTTGTCGTAAGTACGATGAAAACAAAGATCCTAGTCTCTGGTTGACTTGCAGCTCAGATTCTCCGTTTGAAGGTGGTTCCTGCGGATCTTCGTGTCATCTCGAATGTGCTTTCGAGAGCGAAAAGTCCGGTCTGGCAAAGCGAAGCGAGGAGTGCTGCTTTTACTGCGTCTCTTGCGGTAAGCCAAACAGCTTGCTTGAGTGTTGGAAGAAGCAGCTGACGATTGCTAAAGAAGCCAGGAGGGTGGACATACTCTGCTACCGTCTCTTACTAGTCCAGAAACTTGTGAAGGGATCGAGTAAATATCGAAATGTATGTGAGGCTGTGGAGAAAGCTGTGAAGTGTCTTGAAGCTGATGTGGGCCCTCTCACGATGAAGATGGGTAGAGGGATTGTAAACAGACTAAACTCAGGACCTGACGTGCAGAAGCTTTGCTCTTCTGCTCTTGAATCTCTTCAAACACTTGAAACTAAACCTCCTGAAGTTGCTGCATTGCCTTCTCCTCGCAGCTCTAAGTGGTTGAGCAATGAGATATCTGCAGATACAGCAACCACAGTACCACCAACCAAGATCAGATTCGAGGATGTTAATGCGACTTCACTCACGGTGATTCTAGCATCCAGCGAAGTCGCCTCGCCTGCAAACATTGTTCATTACAGCATTTGGCATCGTAAGGTCACTGAGAAAGAGTACCAAGAGAAGTCTACTTGCACGTTGTTCACTCCAAACGCGAGATTCGTCGTCTCAGGACTAGCTCCGGCGTCTGAGTACTGCTTCAAGGTTGTGTCCTTTAGCGGAACACGAGAGCTGGGAGTCGATGTGATCAAGGTTTTGACGCGTGGCCCTGAAGAAAGAAGCGAGAGCCCTCTCACAAACTGTAGCACATTGTCTTCTAACCCTTCTTCTGCTGAAGCTGAGTCCAACAACGGCAAGAAAGACTCTCCGTCGACCGAGGAAAATGCTGCGAAAAGGACTGTTGAACCAGACCTTGTGGAGGCCGAGAAGAACGTTGAAGGGGTTGTGTTGTCGGATGAGGTGGAGGAAGAAGCTGTTCAGGACAAGAACGTCGCGGTTACTACAACTAATGGAAACAGTTCTCCAGTTACTCCCTTTAAGTCAGACCAAACCAAGAACCGTCAAGTGAGAAACAAGAAGTTAGTTAAAGATAACGGTAATAACGGAGATCATCATTCAGCAAACGGAGGAGCAGAGAGTGGACTAGAGCATTGTGTGAAGATCATAAGGCAGCTCGAGTGTTCAGGTCACATTGAGAAAGACTTCAGGCAAAAGTTTTTGACTTGGTATAGCTTAAGAGCCACGCCACAAGAGAGCAGAGTTGTGAAGATATTCATTGATACGTTTACTGATGATCCCGTGGCTTTAGCTGAGCAGCTCGTTCATACTTTCAGCGACCGCGTTTCGATGAAGCGTTCTGCGATTGGTGGTGGTGCGTCTGCGGTTGTTCAGTCTGGATTCTGCATGAAGTTGTGGCATTAG
Protein Sequence
- >Bo3g175710
MDSSLDGAAGDSSKCSEMSVEEKRQLVYELSKQSSHLAPEVLQAWSRQEILQILCAEMGKERKYTGLTKVKIIETLMKIVSEKNAGECDENKKKRDSDCCLPVQRSAKRPRKVDNPTRYVAPTSNNNASGEEKTTYCNNLACRAVMRQGDTFCRRCSCCICRKYDENKDPSLWLTCSSDSPFEGGSCGSSCHLECAFESEKSGLAKRSEECCFYCVSCGKPNSLLECWKKQLTIAKEARRVDILCYRLLLVQKLVKGSSKYRNVCEAVEKAVKCLEADVGPLTMKMGRGIVNRLNSGPDVQKLCSSALESLQTLETKPPEVAALPSPRSSKWLSNEISADTATTVPPTKIRFEDVNATSLTVILASSEVASPANIVHYSIWHRKVTEKEYQEKSTCTLFTPNARFVVSGLAPASEYCFKVVSFSGTRELGVDVIKVLTRGPEERSESPLTNCSTLSSNPSSAEAESNNGKKDSPSTEENAAKRTVEPDLVEAEKNVEGVVLSDEVEEEAVQDKNVAVTTTNGNSSPVTPFKSDQTKNRQVRNKKLVKDNGNNGDHHSANGGAESGLEHCVKIIRQLECSGHIEKDFRQKFLTWYSLRATPQESRVVKIFIDTFTDDPVALAEQLVHTFSDRVSMKRSAIGGGASAVVQSGFCMKLWH