Information report for Bo3g104750
Gene Details
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Functional Annotation
- RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing.
Homologous
- Actinidia chinensis: CEY00_Acc26765, CEY00_Acc22022
- Brassica napus: BnaC03G0546700ZS, BnaA06G0283600ZS, BnaC09G0076100ZS
- Brassica rapa: Bra038607, Bra035858
- Capsicum annuum: T459_32871
- Glycine max: Glyma.05G040600
- Gossypium hirsutum: Gohir.A03G061700, Gohir.D03G104300
- Populus trichocarpa: POPTR_015G082500v3
- Solanum tuberosum: PGSC0003DMG400026989
- Vitis vinifera: VIT_17s0000g09070
Gene Resources
- Pfam: PF00850
- UniProt: A0A0D3BFI7
- RefSeq: XP_013622101.1
- AlphaFoldDB: A0A0D3BFI7
- KEGG: boe:106328247
- OMA: GKIMEWY
- InterPro: IPR000286 , IPR003084 , IPR023696 , IPR023801 , IPR037138 , IPR050284
- PANTHER: PTHR10625 , PTHR10625:SF10
- SUPFAM: SSF52768
- Gene3D: 3.40.800.20
- OrthoDB: A0A0D3BFI7
- SMR: A0A0D3BFI7
- CDD: cd09991
- eggNOG: KOG1342
- STRING: 109376.A0A0D3BFI7
- HOGENOM: CLU_007727_7_12_1
Sequences
gDNA Sequence
- >Bo3g104750
TGGAGACAGACGAGAGCGGCGTCTCTTTAGCGTCAGGGCCCGACGGTCGTAAGCGACGAGTCAGCTACTTCTACGAGCCAACGATCGGTAACTACTACTACGGTCAAGGCCACCCCATGAAGCCTCACCGGATCCGTATGGCTCATAGTCTAATCGTCCACTACAACCTCCACCGCCGCCTCGAGATCAGCCGCCCTTACCTCGCCGACGCTGCCGACATCGGTCGCTTCCACTCTCCCGAGTACGTCGATTTCCTCCGCTCCGTTTCGCCGGAGTCCGTCGGCGATTCGTCCGCGCGTAACCTAAGGCGATTCAATGTCGGCGAGGATTGTCCCGTCTTCGACGGTCTTTTCGAGTTTTGCCGCGCTTCCGCCGGAGGTTCGATCGGCGCCGCCGTTAAATTGAACCGGCAGGACGCGGATATCGCCATCAATTGGGGCGGTGGGCTTCACCACGCTAAGAAGAGCGAGGCGTCTGGGTTTTGCTACGTAAACGACATCGTTTTGGGGATTCTCGAGTTGCTTAAGATGTTTAGGGTAAAATGCTTGATCTCAATTAGGGTTTTAATGTTATATTTGTAGAGTCGTTTTTGTTAATTTACCATAAAGCTTGAAGCTTTTTGGTACTGATGCTACGTAAACGACATCGTTTAGGGATTCTCGAGCTGCTTAAGTTGTTCAGGGTAAATGCTTGATCTCAATTAATGTTATCTTGTGGAGTAGTTTTCCTAGATTTACCTGAAAGGTGGAAGCTTTTTGGGACTGATGATTTGAATTTTAATTAGGGTTTAATGTTATTGTATTCTGATAGAGATTAATAAGTCTAATATGCTTTCATCGTTTGCAGCGGGTTCTCTACATTGATATCGATGTTCACCATGGAGATGGAGTAGAGGAAGCGTTTTACACCACTGATAGAGTTATGACCGTTTCTTTTCACAAGTTTGGGGACTTCTTCCCTGGAACTGGTCACATCAGAGACGTTGGCGCTGAGAAAGGGAAGTACTATGCTCTCAATGTCCCGTTGAACGATGGTATGGACGATGAGAGTTTCCGCAGCTTGTTTAGACCTCTTATCCAGAAGGTTATGGAGGTTTATCGGCCAGAAGCAGTTGTTCTTCAGTGCGGGGCTGACTCCTTGAGCGGTGATCGGCTGGGTTGCTTCAACTTGTCAGTCAAGGGCCATGCTGATTGCCTCCGGTTCTTGAGATCTTATAATGTTCCTCTCATGGTCTTGGGTGGTGGAGGGTATACTATTCGGAATGTTGCTCGTTGCTGGTGTTATGAGGTTTTTTTTTCATATCTTTTGCATTTCTTCTATGCCTTTTTTGGTAAAGTTTTTGTTCTTGAAAGGTTTTGGTTTCTGTTGACTCTGTTGCAGACTGCAGTTGCGGTTGGAGTAGAGCCGGACAACAAGCTACCGTACAATGAGTACTTTGAGTATTTCGGTCCAGACTATACGCTTCATGTCGAGCCAGGCCCAATGGAGAATTTGAACACACCAAAAGATATGGAGAGGATAAGGTATGATGATCTCATTCTACCCCTTTTATGGTTGTGCCGGTTCCAATTGTTCACGGAAGCTTTACATGCTCATAGCCTATATTTTGAACTTGGGGAAGTTAAACTTGTTGAAAATTTCAGGAACACATTGCTAGAACAACTTTCTGGACTAATACACGCACCTAGTGTGCCGTTTCAGCACACACCTCCAGTTAATCGAGTCTTAGATGAGGTAAATTTTCCAATCATCCATATCTTCTCTCTGCTGTTTTAGTTTCTTTCATGTTCTATTGAAGCAGACTCATTAGACTTTTTGTTGTTATCTCAAATCTTTAGCCGGAAGAAGACTTGGAGAAGAGACCAAAGCCTCGAATTTGGAGTGGAACTGCGAATTATGAATCAGACAGTGACGATGATGAGAAACCTCTTGGTGGTTTCTCAGGTATTAATGGCCCAACTATGGACAGGTAAAAAAAAAAGCTTCATCTTACTTCACCAGTCTACCAAATCTTTGATTCTTATTGTTTCCTCTAAATAGACATCTCTTATCTCTTTAGGGACTCTACAGGGGAAGATGAAATGGAAGATGATAGCGCAGAGCCGGAGGTGGATCCACCATCGTCTTGA
CDS Sequence
- >Bo3g104750
ATGGAGACAGACGAGAGCGGCGTCTCTTTAGCGTCAGGGCCCGACGGTCGTAAGCGACGAGTCAGCTACTTCTACGAGCCAACGATCGGTAACTACTACTACGGTCAAGGCCACCCCATGAAGCCTCACCGGATCCGTATGGCTCATAGTCTAATCGTCCACTACAACCTCCACCGCCGCCTCGAGATCAGCCGCCCTTACCTCGCCGACGCTGCCGACATCGGTCGCTTCCACTCTCCCGAGTACGTCGATTTCCTCCGCTCCGTTTCGCCGGAGTCCGTCGGCGATTCGTCCGCGCGTAACCTAAGGCGATTCAATGTCGGCGAGGATTGTCCCGTCTTCGACGGTCTTTTCGAGTTTTGCCGCGCTTCCGCCGGAGGTTCGATCGGCGCCGCCGTTAAATTGAACCGGCAGGACGCGGATATCGCCATCAATTGGGGCGGTGGGCTTCACCACGCTAAGAAGAGCGAGGCGTCTGGGTTTTGCTACGTAAACGACATCGTTTTGGGGATTCTCGAGTTGCTTAAGATGTTTAGGCGGGTTCTCTACATTGATATCGATGTTCACCATGGAGATGGAGTAGAGGAAGCGTTTTACACCACTGATAGAGTTATGACCGTTTCTTTTCACAAGTTTGGGGACTTCTTCCCTGGAACTGGTCACATCAGAGACGTTGGCGCTGAGAAAGGGAAGTACTATGCTCTCAATGTCCCGTTGAACGATGGTATGGACGATGAGAGTTTCCGCAGCTTGTTTAGACCTCTTATCCAGAAGGTTATGGAGGTTTATCGGCCAGAAGCAGTTGTTCTTCAGTGCGGGGCTGACTCCTTGAGCGGTGATCGGCTGGGTTGCTTCAACTTGTCAGTCAAGGGCCATGCTGATTGCCTCCGGTTCTTGAGATCTTATAATGTTCCTCTCATGGTCTTGGGTGGTGGAGGGTATACTATTCGGAATGTTGCTCGTTGCTGGTGTTATGAGACTGCAGTTGCGGTTGGAGTAGAGCCGGACAACAAGCTACCGTACAATGAGTACTTTGAGTATTTCGGTCCAGACTATACGCTTCATGTCGAGCCAGGCCCAATGGAGAATTTGAACACACCAAAAGATATGGAGAGGATAAGGAACACATTGCTAGAACAACTTTCTGGACTAATACACGCACCTAGTGTGCCGTTTCAGCACACACCTCCAGTTAATCGAGTCTTAGATGAGCCGGAAGAAGACTTGGAGAAGAGACCAAAGCCTCGAATTTGGAGTGGAACTGCGAATTATGAATCAGACAGTGACGATGATGAGAAACCTCTTGGTGGTTTCTCAGGTATTAATGGCCCAACTATGGACAGGGACTCTACAGGGGAAGATGAAATGGAAGATGATAGCGCAGAGCCGGAGGTGGATCCACCATCGTCTTGA
Protein Sequence
- >Bo3g104750
METDESGVSLASGPDGRKRRVSYFYEPTIGNYYYGQGHPMKPHRIRMAHSLIVHYNLHRRLEISRPYLADAADIGRFHSPEYVDFLRSVSPESVGDSSARNLRRFNVGEDCPVFDGLFEFCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPLIQKVMEVYRPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVEPGPMENLNTPKDMERIRNTLLEQLSGLIHAPSVPFQHTPPVNRVLDEPEEDLEKRPKPRIWSGTANYESDSDDDEKPLGGFSGINGPTMDRDSTGEDEMEDDSAEPEVDPPSS