Information report for Bo3g061400
Gene Details
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Functional Annotation
- This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO.
Homologous
- Brassica napus: GSBRNA2T00125199001, BnaA03G0310300ZS, BnaC03G0371800ZS, GSBRNA2T00111777001, GSBRNA2T00059507001, BnaA05G0456200ZS, GSBRNA2T00038967001, BnaC05G0514700ZS
- Brassica rapa: XP_009134989.1, Bra001264, XP_009147048.1, XP_009147047.1, Bra029666
- Raphanus raphanistrum: RrC508_p5
Gene Resources
- Pfam: PF06203 PF00643
- UniProt: A0A3P6B4U7
- EMBL: LR031872
- AlphaFoldDB: A0A3P6B4U7
- OMA: MGSMSIA
- InterPro: IPR000315 , IPR010402 , IPR049808
- PANTHER: PTHR31717 , PTHR31717:SF79
- PROSITE: PS50119 , PS51017
- SMR: A0A3P6B4U7
- CDD: cd19821
Sequences
gDNA Sequence
- >Bo3g061400
TGGGTTACATGTGTGACTTCTGTGGTGAACAAAGATCAATGGTGTACTGCCGATCAGATTCAGCCTGTCTCTGCCTCTCCTGTGACCGTAGTGTTCATTCAGCAAACGCATTATCCAAACGACATTCTAGGACACTTGTCTGCGAGAGATGCAATGCACAGCCTGCAACAGTTAGGTGTGTTGAAGAGAGAGTCTCACTCTGTCAAAACTGTGATTGGTCAGGCCACAACAACAACAAAACTTTATCTTCAAATAATCACCAGAGGCAAAGTATAAGCTGCTATTCAGGTTGCCCTTCAAGCTCAGAGCTCGCCTCTATCTGGTCTTTTTGTTCAGACTTAGCAGGAGAATCCGCTTGTGAACAAGAAATGGGTATGCTGAATATAGACGATGATGGTCAGACCAAACAAAACTGTAATGAGGATAAGAAAGATGAAACCAGTTCTGCAGCACAAGCAACAAATGCATCATTTGCTAAGGTAACTTAATTTTCTTTCATCGTTAGCTCAACTAGAAAAGACCATGGCCATTGTGTCAGAGGTCCCGGGCTCATATTACCTCTGAGACAAAACTAATTAATATTACATGTTGTGGTTTCGGATCCGGGGGATTACAAGCTTTGGCCCTAACTTCATGATATTAAAAATAAAAATTTACCTTCTGGAAATGCTAAGCAACATCAATGGATTTATCATGTTTCTTTTAACTAAACCCTCAAGTTCTTGTTATGGTTTGAAGGATGTTGGAGTGTGTGAAGATGACTTTTATGGAAACTTGGGTATGGATGAAGTTGACTTGGCTCTTGATAACTACGAAGAGCTCTTTGGAACAGCCTTTAACACCTCGGTACATCTCTTTGGACAAGGTGGAGTCGATAGTATTTTCCAGAAACATCACCAAGCAGCTCCTCCTGAGGTACGTTTTCCATTAGACAAAGAGATTGCATCTTTGTGTGATTCTAATGATGATCTTTGTTAATCCAGGGAGGGAATCTGGTGCAGCCAGCTGAGAGTAATGATGACTCGTTCATGAGTTCTAAAACGGAGCCAATCATTTGCTACACGTCTAAGCCAGCACATTCAAACATATCTTTCTCTGGAGTCACCGGAGAAAGCAGTGCTGGAGATTTTCAAGAATGTGGTGCATCATCTTCCGTGCAGCTCACGGGTGAGCCACCATGGCATCCTCAAACATCACAGTCAGTAACCCGTAATAACGCGGTTATGCGTTACAAGGAAAAGAAGAAGGCTCGCAAGTAAGTTATAACCTTTATTCAATACATGCATCAGTGAAGTAAGTTCAGTGTTTTCTAAAATGAGAGATTGTGGTTTTTGTTTAGGTTTGATAAGAGAGTGAGGTATGCTTCTCGGAAAGCAAGAGCTGATGTGAGAAGGCGTGTAAAGGGGAGATTTGTTAAAGCTGGTGAGGCTTATGACTACGACCCACTCACCCCAACCAGAAGCTATTGA
CDS Sequence
- >Bo3g061400
ATGGGTTACATGTGTGACTTCTGTGGTGAACAAAGATCAATGGTGTACTGCCGATCAGATTCAGCCTGTCTCTGCCTCTCCTGTGACCGTAGTGTTCATTCAGCAAACGCATTATCCAAACGACATTCTAGGACACTTGTCTGCGAGAGATGCAATGCACAGCCTGCAACAGTTAGGTGTGTTGAAGAGAGAGTCTCACTCTGTCAAAACTGTGATTGGTCAGGCCACAACAACAACAAAACTTTATCTTCAAATAATCACCAGAGGCAAAGTATAAGCTGCTATTCAGGTTGCCCTTCAAGCTCAGAGCTCGCCTCTATCTGGTCTTTTTGTTCAGACTTAGCAGGAGAATCCGCTTGTGAACAAGAAATGGGTATGCTGAATATAGACGATGATGGTCAGACCAAACAAAACTGTAATGAGGATAAGAAAGATGAAACCAGTTCTGCAGCACAAGCAACAAATGCATCATTTGCTAAGGATGTTGGAGTGTGTGAAGATGACTTTTATGGAAACTTGGGTATGGATGAAGTTGACTTGGCTCTTGATAACTACGAAGAGCTCTTTGGAACAGCCTTTAACACCTCGGTACATCTCTTTGGACAAGGTGGAGTCGATAGTATTTTCCAGAAACATCACCAAGCAGCTCCTCCTGAGGGAGGGAATCTGGTGCAGCCAGCTGAGAGTAATGATGACTCGTTCATGAGTTCTAAAACGGAGCCAATCATTTGCTACACGTCTAAGCCAGCACATTCAAACATATCTTTCTCTGGAGTCACCGGAGAAAGCAGTGCTGGAGATTTTCAAGAATGTGGTGCATCATCTTCCGTGCAGCTCACGGGTGAGCCACCATGGCATCCTCAAACATCACAGTCAGTAACCCGTAATAACGCGGTTATGCGTTACAAGGAAAAGAAGAAGGCTCGCAAGTTTGATAAGAGAGTGAGGTATGCTTCTCGGAAAGCAAGAGCTGATGTGAGAAGGCGTGTAAAGGGGAGATTTGTTAAAGCTGGTGAGGCTTATGACTACGACCCACTCACCCCAACCAGAAGCTATTGA
Protein Sequence
- >Bo3g061400
MGYMCDFCGEQRSMVYCRSDSACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRCVEERVSLCQNCDWSGHNNNKTLSSNNHQRQSISCYSGCPSSSELASIWSFCSDLAGESACEQEMGMLNIDDDGQTKQNCNEDKKDETSSAAQATNASFAKDVGVCEDDFYGNLGMDEVDLALDNYEELFGTAFNTSVHLFGQGGVDSIFQKHHQAAPPEGGNLVQPAESNDDSFMSSKTEPIICYTSKPAHSNISFSGVTGESSAGDFQECGASSSVQLTGEPPWHPQTSQSVTRNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGEAYDYDPLTPTRSY