Information report for Bo3g058530
Gene Details
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Functional Annotation
- Encodes a nuclear protein that functions in mRNA processing. Mutations in this gene cause embryo lethality and reduced transmission through the female gametophyte. Over-expression of a CLPS3:TAP protein changes the relative levels of two alternatively processed FCA transcripts. It also causes abnormal phyllotaxy and flower development, early flowering under long and short days, and increased levels of CUC1 and WUS expression.
Homologous
- Arabidopsis thaliana — AT3G04680
Gene Resources
- Pfam: PF06807 PF16573 PF16575
- UniProt: A0A0D3B9N9
- RefSeq: XP_013628378.1
- AlphaFoldDB: A0A0D3B9N9
- KEGG: boe:106334608
- OMA: VQYVNCH
- InterPro: IPR010655 , IPR027417 , IPR028606 , IPR032319 , IPR032324 , IPR038238 , IPR038239 , IPR045116
- PANTHER: PTHR12755 , PTHR12755:SF6
- SUPFAM: SSF52540
- Gene3D: 2.40.30.330 , 2.60.120.1030 , 3.40.50.300
- OrthoDB: A0A0D3B9N9
- eggNOG: KOG2749
- STRING: 109376.A0A0D3B9N9
- HOGENOM: CLU_018195_1_0_1
Sequences
gDNA Sequence
- >Bo3g058530
TAATGACTCTCAAGCCATGTCAAAGATCCAGCGACCAAGATCTTGCTAGGCAATGCCCCTGGCGATGGTGCTAAATACGTTATCTTCTTCCTCAGCACATCAACCTCAGTCACATACACAAACCCTGAAACATTGCTGCACACAAAGCACCACAGAGAGAAAGAAACAAACATCAAACAACGCAATGACAAGAAAAAACGGAAGTCATCAAGAACATATTGAGATTACCTAGAGACAATCTGGTCCGGTTCTTCTGCATATGAGACAGCGAGGATAGAATGCAGCAGATCCCTCTCTTCAATATTTACAGGCGTCACCCTCAACGGATTAGAAACAGGATCAGACCCTATTGGAAGAGCTGACCTTGGAGCTTGCGGTCCACCACCAATGCGGAACACTTGCACATCACTGAAGCTAGATGTGTTGGCATAAGGAGAGAGTTCTTTCGATAGACCGTAGAAATACTCCTGAATCCTAGAGCTTCTCGCTACTTTACGGTAGTCACGGTTCCTAGCCACAACTCCACCTGACTTGTGAAGCTTCACAACGTCCACATTGCTCTTACTCTTCAGCACGTCTTTAAGCATGCTGAAGAGCTTTTCTTGACCCAAGACAAGTACAACCGAGGCGTTGAATGTTTCAATTGCGTGGAGAAGCAGCTGCAAAACAAACACACAGAGACAGTTATTTTTAAAACAAAAGCTTTCAGAAGTAAACAGAACCAACGTTTACCTCATAACCGATACCATCGATCCATCCCATTGTGTTGATCACCATACCAGCAGCTCGAGACTCAGGGTTTCCAAGAAACTGTCTCTCCAGCACTTGTGCAAGCTCCTTCACCATAGTTTTGTATAGTTCAACGTTGTTACTGAGAGAATAACGATAGACAACATTAATAACATATGACTGGGGAAGAGACATTTGAAAATCACTTACGCTGGTGTGGTGTGACCGTAGTAGTAGACGAGAGCCATATCTAGAGGAAACCCTTCAACAGGATCAAGCGGCATCTCTATAGGTGTAGCAGCAATAGAACCAGGTATTGTAATGGAGCCTTGGCCAACATCAAGGTCTACAAATGTAGGCTTCCATCCTTGTTTGGCTGCCCAACTAATAAGCATCTTAGTCAATGTGCTCTTTCCTGAATCCGTAGGCCCTACTACAATGACTCTAGGTCCCTGCACAAAGCCGATTCTATAAGAATCAAATGATTACAAGAACAGGATCATGGCAGAGAAGGGGTACCGTACCTGAGGAGAATCAGAGTCGGTAGATGTGGAAGCTTTGGCAAAACGTCTCCTTGCATCAAGTATGGCGTGCACATTAACGTAGCTGACCATTGGTGTCTACAAGAAAAAAAGCCGAGAGCTTGTTAGAAATCAATCTTTAGCTCTAAAGGAAGAGTGGAAAATGAAACAAGAACCTTTACCTCATCTGCTGTATAGTCTGTTTCAGTGACACCATCCATCTCAATTGTGGCTCCATACCAAGTGAAAACCTGACAAGAACCAAAAGACAAACACATTGTTTCACATAATCTCCTCGTATACGAACTAACTTTAACGGTTCTAAAGTGATTCGTCATGTTACTACATAAAGGTTAAGACTTTCATCCCAAAAAAAAAACACAAAGACCATAAAGTTTTCAACTTTACCCAACCCCCATGAAGGCTTAGAGGATGAAGTTGATAGCAACTCAAATTAGTACCGAGAAGGAAACAAACACAAAAGAAGAACTTGCCAGAACCACAAATCTACTCATAGATCAAAATACGAACTAACTTAACGGTTCTAAAACTAATTCAATCATGTTACTACCTAAAGCTTAAGCTTTTCATCTCAAACATAGCACAAAGACCATAAAGTCTTAAACTTTCCCAACCAATGAAGCCAAAGAGCGAACTTGATAGCAACTCAAGCACACACTTGGAGATTAGATAACCATAACTAACTTAACGGTTCTTAACTGATTCATACCTAAAGCTCAAGTCTTTCATCCCAAACAAAAAAAAACACAAACACCATAAAGTCTTCAACTTTACCCAACCAACGAAGGCAAGAGAATGAGCTTGATAGAAACTCAAAGAACACACTTGGAGATTATAAAACCATAACTAATATTATTACTACCAAAAGCTTAAGTCTTTCATCCCAAACAAAACACAGAGACCATAAAGTACCCAACCCATGAAAGCCGAAGAGTGAACTTGATAGCAATTCAAGAACACACTTGGAGATAGATAGCCACAACGTACCGCAAATTTGAGGCGAGGAGGAAAGGTACGCCAGATCTCAGGAGGCAGCTCAGCGCCGAAGATCTCAGCAGTCCCGTTAACCACACGGAGTCTAAGAGGCTCGTCAGAGACTTCGATTCTTAGCTCGCTTTCTCTGTCCAGCTTCACCTGCTTCAGATTACTAGAACCTCCAGGAACCGCGCCAATCATAGCCGGTGGGTTCATCGACGGACCACCGTAAGACAT
CDS Sequence
- >Bo3g058530
ATGTCTTACGGTGGTCCGTCGATGAACCCACCGGCTATGATTGGCGCGGTTCCTGGAGGTTCTAGTAATCTGAAGCAGGTGAAGCTGGACAGAGAAAGCGAGCTAAGAATCGAAGTCTCTGACGAGCCTCTTAGACTCCGTGTGGTTAACGGGACTGCTGAGATCTTCGGCGCTGAGCTGCCTCCTGAGATCTGGCGTACCTTTCCTCCTCGCCTCAAATTTGCGGTTTTCACTTGGTATGGAGCCACAATTGAGATGGATGGTGTCACTGAAACAGACTATACAGCAGATGAGACACCAATGGTCAGCTACGTTAATGTGCACGCCATACTTGATGCAAGGAGACGTTTTGCCAAAGCTTCCACATCTACCGACTCTGATTCTCCTCAGGGACCTAGAGTCATTGTAGTAGGGCCTACGGATTCAGGAAAGAGCACATTGACTAAGATGCTTATTAGTTGGGCAGCCAAACAAGGATGGAAGCCTACATTTGTAGACCTTGATGTTGGCCAAGGCTCCATTACAATACCTGGTTCTATTGCTGCTACACCTATAGAGATGCCGCTTGATCCTGTTGAAGGGTTTCCTCTAGATATGGCTCTCGTCTACTACTACGGTCACACCACACCAGCTAACAACGTTGAACTATACAAAACTATGGTGAAGGAGCTTGCACAAGTGCTGGAGAGACAGTTTCTTGGAAACCCTGAGTCTCGAGCTGCTGGTATGGTGATCAACACAATGGGATGGATCGATGGTATCGGTTATGAGCTGCTTCTCCACGCAATTGAAACATTCAACGCCTCGGTTGTACTTGTCTTGGGTCAAGAAAAGCTCTTCAGCATGCTTAAAGACGTGCTGAAGAGTAAGAGCAATGTGGACGTTGTGAAGCTTCACAAGTCAGGTGGAGTTGTGGCTAGGAACCGTGACTACCGTAAAGTAGCGAGAAGCTCTAGGATTCAGGAGTATTTCTACGGTCTATCGAAAGAACTCTCTCCTTATGCCAACACATCTAGCTTCAGTGATGTGCAAGTGTTCCGCATTGGTGGTGGACCGCAAGCTCCAAGGTCAGCTCTTCCAATAGGGTCTGATCCTGTTTCTAATCCGTTGAGGGTGACGCCTGTAAATATTGAAGAGAGGGATCTGCTGCATTCTATCCTCGCTGTCTCATATGCAGAAGAACCGGACCAGATTGTCTCTAGCAATGTTTCAGGGTTTGTGTATGTGACTGAGGTTGATGTGCTGAGGAAGAAGATAACGTATTTAGCACCATCGCCAGGGGCATTGCCTAGCAAGATCTTGGTCGCTGGATCTTTGACATGGCTTGAGAGTCATTAG
Protein Sequence
- >Bo3g058530
MSYGGPSMNPPAMIGAVPGGSSNLKQVKLDRESELRIEVSDEPLRLRVVNGTAEIFGAELPPEIWRTFPPRLKFAVFTWYGATIEMDGVTETDYTADETPMVSYVNVHAILDARRRFAKASTSTDSDSPQGPRVIVVGPTDSGKSTLTKMLISWAAKQGWKPTFVDLDVGQGSITIPGSIAATPIEMPLDPVEGFPLDMALVYYYGHTTPANNVELYKTMVKELAQVLERQFLGNPESRAAGMVINTMGWIDGIGYELLLHAIETFNASVVLVLGQEKLFSMLKDVLKSKSNVDVVKLHKSGGVVARNRDYRKVARSSRIQEYFYGLSKELSPYANTSSFSDVQVFRIGGGPQAPRSALPIGSDPVSNPLRVTPVNIEERDLLHSILAVSYAEEPDQIVSSNVSGFVYVTEVDVLRKKITYLAPSPGALPSKILVAGSLTWLESH