Information report for Bo3g026990
Gene Details
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Functional Annotation
- Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.
Homologous
- Arabidopsis thaliana: AT2G32950
- Brassica napus: BnaC03G0184700ZS, BnaC04G0141600ZS, BnaA05G0112800ZS, BnaA04G0211800ZS
- Gossypium hirsutum: Gohir.D11G159400, Gohir.A11G152500
- Juglans regia: Jr01_18280
- Manihot esculenta: MANES_12G068900
- Medicago truncatula: Medtr5g085250
- Vitis vinifera: VIT_12s0059g01420
Gene Resources
- Pfam: PF00400 PF00097
- UniProt: A0A3P6H040
- EMBL: LR031954
- AlphaFoldDB: A0A3P6H040
- InterPro: IPR001680 , IPR015943 , IPR036322 , IPR042755
- PANTHER: PTHR44080 , PTHR44080:SF1
- SUPFAM: SSF50978
- Gene3D: 2.130.10.10
Sequences
gDNA Sequence
- >Bo3g026990
TATATATAGATGCATGCGAGCTTGTTGTTAAACAAAAATTTCACATAGGAGACCGCTTTCTTGTGTCCACTGAAGACATGAAGTGGCTGGCTTATGTTTCTTAAATCGTAATAATGGATGTGATGATCAGCTGATCCAGCCTGCAACAAGTCAATATATAGGCTTAGAAGTCATAGTGTCTCTATCTAACTAAAGATTAGATCTGAAGATGTGTGATCGTGTCAAGCTGATCATGATCGTGTAGTTCAAACATGAATAGGGAATCAATGTGAGATGCAAAGTTGGTGGAGTCATGAAAGTATATACCGCAATGAAGTTGCTTGAGCCAAGATTGTACTTGACACACCATATGTTTGCTTTCATATCAATCTTAAGCACACTTTCTTCCTGACTTGTGCACCAAACTTTAACCTGGTTCAAACACATATCACAATAGGTTAATCAACTATATGGTGCATATCGCTTCTGTCAGACTTAGAATTCCAGAGAACACAAAAGATTACTTAAGTCAATATCACATCCAACATGAGTTTCTTAGAAAGCTTTTCTTTTTGCCAATTTTATTCATTTCATTGGACAAAAGTCCAAAGGGCCAACATTACAAGTTACATGCTTATTAACAAGGCGCAAAAGAGATGAAACAAAGAAAATTAAAATACTGAAGTCCAATTTTGAGGCGGTAGTTGATGTTACACGCAAGATTAAGATGGTTTGCTTATGACACAACACACGTGGACTTCATGCGAACACCAACCTCTCCGGTCGTCGAGAAAGCTTCACCACCGTAGACTCTTCTGCCTCGTGTCCCTTTCTTCTCCGTCGTTAACAGCCGAGCCCTAACTTGTACTCGCTCTTTCGTCTTTCACCGTCGCAAGTGACTTAGTATCAGACATCTCCAGATATTATTAACTCAAGGATTGCTCGACCAAATCCAAATGAAGACCCTTCATTGGACCGCTCAATGAATGCCAATCTCTACTGAATCTCTATTGAATCGATCAGAATTAATCCATCTTCTCTTCATCCTTTTCTTAAAGAAAGCTTCATCCATAATTAAGCCGATCTCCGGCAAGCTTCTAGCCAGATGAATTCTGATTTCTGCAGGAAAGAAATCAAAGGAAGATAATCCATCACAAGCAAACAGAATTTGAGTTAGATCACGGAAGAGTAAAACGAAACCGGAAATAAGATCCAAAATTTATTTTTTCAATCAATTATCTGAGAAGATAAGCTTTCAGTTAACTCAGAATCGATTGAAATCATCACATCAAAAATCGCCATCGCGAAAGAAAATTCCTCTAACCGGAAAAACTAGAATCTATCATAAGATCGGACACAAAAAACAAAAACTTTGATCTCAGCCCATGTGAAAGATATGAGTCGGTGAACAGGGGCTTGAGAAAAATTTTCGTTCTCTACAGAAAGAGAGAGAAAACAAGTTTATTTTAGTTTGCTGACTTTGAGTTTCTTAGAAAGCTAGTAACAACTTTCTGATAACATCAGGAAATGGAGTTATGAATGTTAATGTATCATATGACCAATCCCACATGTACACAATGTACTATACTTTTCATACAAGACAAAGCACTACGCGAGATAGAAAGTAAACAAGGAAGACTCGGGAGGTGCCTTACAATTGTCACTACCAGATACAAGCATAGACGGTTTTTGTAACATCTCGATTTCTGATATATGAGGAAAACTTTTAAGAGAATAATGTATATATGTCACTAGAGTGCGCTTATCTTTTCGGTCACACATCCATTTAGAATTTCAGAATTAAGCATGTTTGAGTTAGAGTAGTTGAATGATGGGTAAACTATCGGGAAGTGATTCACGATAACGTGCAAGTGAAGTCAAAGCATAGAGAAAGATCATGTAATGATTACAGTGTCAGTATTCAGTAAACAATGATTTCAAGCCTTCGGTAAATTAACACACCGTCCGTCGGATGGGATAGAGCCCACGGATCGAGTGAACGCGCGTTGGTGGCCCATTAACCGTTGGCGATCGGGGTGTTATAGTCCTGTTCGTGAAAAGTCAACACTCCAAGCACGTTTTCCGTGTTCTCCATAAGACTCTGTCACCAGTAGTTTACATAAAATTTAAGACACGTTGCACTGTTAATTAAATGAATATTATCTTAAAAGTTTCGAACCAGTGTTGGATTATTAAGGCAAAGTATACACCTGTCTAGTAGTTACATCCCACAGAGTCATTGTTCTTTCATAATCACTGCTTGCAAATATCATTGCACTGTTAATCAAATGAATATTATCTTAAAACTTTCGAACCAGTGTTGGATTATTAAGGCAAAGTATTCACCTGTCTAGTAGTTACATCCCACACGGTCAT
CDS Sequence
- >Bo3g026990
ATGACCGTGTGGGATGTAACTACTAGACAGAGTCTTATGGAGAACACGGAAAACGTGCTTGGAGTGTTGACTTTTCACGAACAGGACTATAACACCCCGATCGCCAACGAGAACGAAAATTTTTCTCAAGCCCCTGTTCACCGACTCATATCTTTCACATGGGCTGAGATCAAAACGAAAGAGCGAGTACAAGTTAGGGCTCGGCTGTTAACGACGGAGAAGAAAGGGACACGAGGCAGAAGAGTCTACGGTGGTGAAGCTTTCTCGACGACCGGAGAGGTTAAAGTTTGGTGCACAAGTCAGGAAGAAAGTGTGCTTAAGATTGATATGAAAGCAAACATATGGTGTGTCAAGTACAATCTTGGCTCAAGCAACTTCATTGCGGCTGGATCAGCTGATCATCACATCCATTATTACGATTTAAGAAACATAAGCCAGCCACTTCATGTCTTCAGTGGACACAAGAAAGCGGTCTCCTATGTGAAATTTTTGTTTAACAACAAGCTCGCATGCATCTATATATAG
Protein Sequence
- >Bo3g026990
MTVWDVTTRQSLMENTENVLGVLTFHEQDYNTPIANENENFSQAPVHRLISFTWAEIKTKERVQVRARLLTTEKKGTRGRRVYGGEAFSTTGEVKVWCTSQEESVLKIDMKANIWCVKYNLGSSNFIAAGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLFNNKLACIYI