Information report for Bo3g001090
Gene Details
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Functional Annotation
- LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1;late elongated hypocotyl and circadian clock associated-1-like protein 1, LATE ELONGATED HYPOCOTYL 1 gene a
Homologous
- Brassica napus: BnaC03G0001300ZS, GSBRNA2T00134120001, GSBRNA2T00034511001, Bnascaffold0415G0000300ZS, BnaA07G0053300ZS, GSBRNA2T00085393001, BnaC05G0010100ZS, GSBRNA2T00150502001, BnaA10G0008600ZS
- Brassica rapa: Bra030496, XP_009111205.1, XP_009119664.1, Bra033291
Gene Resources
- Pfam: PF00249
- UniProt: A0A0D3AZ74
- RefSeq: XP_013630031.1
- AlphaFoldDB: A0A0D3AZ74
- KEGG: boe:106335903
- OMA: NVRNDQL
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017884 , IPR017930
- PANTHER: PTHR12802 , PTHR12802:SF176
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS51293 , PS51294
- Gene3D: 1.10.10.60
- OrthoDB: A0A0D3AZ74
- SMR: A0A0D3AZ74
- CDD: cd00167
- eggNOG: KOG0724
- STRING: 109376.A0A0D3AZ74
- HOGENOM: CLU_025358_0_0_1
Sequences
gDNA Sequence
- >Bo3g001090
TGGATACAAATACATCTGATGGACCTGGTGAAGAATTATTAACTAAGGTAATAAAATGCAAAAGATTGTCCTAGTTTGAGATTTTTCTTCTTTGTTTAGTGTGACGTGAGCGAATATTTGGTTTTGTTGAATGAATAGGCAAGAAAGCCATATACAATAACAAAGCAGCGAGAACGATGGACTGAGGACGAGCATGATAGGTTTCTTGAAGCCTTGAGGCTTTATGGACGAGCTTGGCAACGTATCCAAGGTCCCAATACATTATTAGCTTCTTGCTGTATGATCTGAACATCAGTCTTCTCTGTTCATTTTCCTTTATTTTTTTTTATTTTTTATTTTCTTGTACAGAACATATTGGGACAAAGACTGCTGTTCAGATCAGAAGCAATGCACAAAAGTTCTTCACAAAGGTAAGCCGTTCGGTTCTGTTGGTTGATTGATAGTGAGTCAATATATAGAGATAGATCCCATGAATTTAGTCAATGACTATGTTTAGAGATTGCCTATCTCACTACCTGTCACTTGTGTGTTGTTTTATTTTGCTAAGTAGAGTTGGTTGGTTCCAAGGATAGCAGCAGATGCTTTGTAGAAATTATTGGTTTTAATATTTTACTATTAGATCAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCCATTCATTATCTGAGACAAGTCTACAGTAACATAACTAGCATTGCATTTCGCATGACACACTTTTGTCCCATATTCACCAAACTCCATTAAATAATGAGATTGCATGGACTCTTTTAGCCATTCAAATAGCAAAAACCAAACCTCCTTGGCCCCTATAGGAAAAGGACATGAAGTAAGTGTCTCCTCTACCCACCACGAACACATTCGGGTCAGTATAAGACTCTTTTTTTTTTAAAATCAAGCTCAAGAGTCTAAGGGTTGCATTTACAATCTCCGATTTGGAAAAAACAAAAAAAAAAAGAACTCACAGTTGTGGTTGGACTCTTCAGTTGGAGAAAGAGGCTGAAGCCAAAGGCATTAAAGCTCTGGACATAGAGATTCCACCTCCTCGTCCTGAAAGAAAACCCAATGTTCCTTATCCTCGGAAACCTGGCCCATCTTCCTCTCAAGCGAAACTTGTATCTTCTTCACAATGTAACCAGCCTCAGGTCTTCTTGGATTTGGAAAAAGTGCCCATTTCTGAGGTTTTTTTGGTTCTTCATTCTATCATTTTGTTGTTGTTTCTTGTGACAGACTTGTTATGCTTTTGTTTCTGGTTTAGAAAACATCAACTGGGAAAGAAAATCAAGAAGAGAACTGCTCAGGGGTGAACAAGTATCCCTTACCAAATAATGTAGTAACTCCAGGGAAACTAAAGACATTCATGGAATCTTCTGATCCGTCGTTAAGAAAGGTATAAAGATTGTAGTCCAAGAACATGATGCTGTATTTTGAAGTTCCTCCATAGCAATAAAAGAAAAACTTGGTTCCATTCTGATTATTTTGAGCAGGCAAGTGCCGATAATGAAACAAGCAAGGCTTCAAATGTGGACAACAACATGGTTCATGAGGAGAACAAAGACATAGATGATGATGGTCTGCACAGCGCAAGGCATCATCCAGCTACTACAACTTCCCATCAAGCGTTTCCAGCATTCCCTTTCCGCTCGTTTCTCCACATGTCTTCTACTTTCTCCAATCTTATCATGTCTACACTCCTACAGAATCCTGCTGTTAATGCTGCAGCCACATTCGCTGCTTCGGCCTGGCCCTTTACTACTAATGCCGGAGCCTCATCAACGCAAATGAGCTCTTCTCCTCCAACTATAGCTGCCATCGTTGCTGCTACAGTAGCTGCCGCAACTGCTTGGTGGGCTTCTCATGGACTTCTTCCTACTCCAGTCCCATTACCAGCCGTCTCAGTTCCAACTCCAGCTGCTATGGATAACGTCCGAAATGATCAACTTGAGAAACAAAGAACGGCCTTTCAAGAACAAAACATGGCTTCAAAATCTCCAGATTCATCATCCGACGGTTCAGAGGAGACTGGAATTACCAAGCTAAAGGCTGACGGTGACAAGGAGGAAGTTGTTGCTGCTTTGCTAGATTCAAACGTTTCCCACAAGAAAAATCCAGTGGACCGCTCATCGTGTGGGTCAAACACACCTTCAGGCAGTGACGTGGAAACAGATGCATTGGAGAAAGAAAAAGAGGCAGATGCAAACCAGCCAAGTGTTATTGAGTTAAGCAACCGTCGGAGTAAAATCAGAGACAACAACAACCAAACTACTGATTCATGGAAGGAAGTCTCTCAAGGGGTAAAACCAAAAAAAGAAAAAACAATGATTCATTCACTTGCAGCGTTTTGCTTTGGAATTAACACTAACCGTGAAACTCTGGTCTCAGGGTCGTATAGCATTTCAGGCTCTCTTTGCAAGAGAGAGGTTGCCACAAAGCTTTTCACCTCCTCAAGCAGCAGAGGATTTGAATGGAAAACAAATTAGCGACACGTCAATGCCATTGGCTCATAATAACTTGAACAAGATTCAAGATTCTTGTAAAGCAGACCAAAAAAGCGCAGTGAATGAAGAACCGGAGAAGAGCCTTAAAATGAGAGAGACAGGGTTTAAGCCATACAAGAGATGTTCCATGGAAGCGAAAGAGAGCCAAGTTGGAAACGCAAACAATCACAATGATGAAAAGGTCTGCTGCAAGAGGCTTCGTCTGGAAGCAGAAGCTTCAACATAA
CDS Sequence
- >Bo3g001090
ATGGATACAAATACATCTGATGGACCTGGTGAAGAATTATTAACTAAGGCAAGAAAGCCATATACAATAACAAAGCAGCGAGAACGATGGACTGAGGACGAGCATGATAGGTTTCTTGAAGCCTTGAGGCTTTATGGACGAGCTTGGCAACGTATCCAAGAACATATTGGGACAAAGACTGCTGTTCAGATCAGAAGCAATGCACAAAAGTTCTTCACAAAGTTGGAGAAAGAGGCTGAAGCCAAAGGCATTAAAGCTCTGGACATAGAGATTCCACCTCCTCGTCCTGAAAGAAAACCCAATGTTCCTTATCCTCGGAAACCTGGCCCATCTTCCTCTCAAGCGAAACTTGTATCTTCTTCACAATGTAACCAGCCTCAGGTCTTCTTGGATTTGGAAAAAGTGCCCATTTCTGAGAAAACATCAACTGGGAAAGAAAATCAAGAAGAGAACTGCTCAGGGGTGAACAAGTATCCCTTACCAAATAATGTAGTAACTCCAGGGAAACTAAAGACATTCATGGAATCTTCTGATCCGTCGTTAAGAAAGGCAAGTGCCGATAATGAAACAAGCAAGGCTTCAAATGTGGACAACAACATGGTTCATGAGGAGAACAAAGACATAGATGATGATGGTCTGCACAGCGCAAGGCATCATCCAGCTACTACAACTTCCCATCAAGCGTTTCCAGCATTCCCTTTCCGCTCGTTTCTCCACATGTCTTCTACTTTCTCCAATCTTATCATGTCTACACTCCTACAGAATCCTGCTGTTAATGCTGCAGCCACATTCGCTGCTTCGGCCTGGCCCTTTACTACTAATGCCGGAGCCTCATCAACGCAAATGAGCTCTTCTCCTCCAACTATAGCTGCCATCGTTGCTGCTACAGTAGCTGCCGCAACTGCTTGGTGGGCTTCTCATGGACTTCTTCCTACTCCAGTCCCATTACCAGCCGTCTCAGTTCCAACTCCAGCTGCTATGGATAACGTCCGAAATGATCAACTTGAGAAACAAAGAACGGCCTTTCAAGAACAAAACATGGCTTCAAAATCTCCAGATTCATCATCCGACGGTTCAGAGGAGACTGGAATTACCAAGCTAAAGGCTGACGGTGACAAGGAGGAAGTTGTTGCTGCTTTGCTAGATTCAAACGTTTCCCACAAGAAAAATCCAGTGGACCGCTCATCGTGTGGGTCAAACACACCTTCAGGCAGTGACGTGGAAACAGATGCATTGGAGAAAGAAAAAGAGGCAGATGCAAACCAGCCAAGTGTTATTGAGTTAAGCAACCGTCGGAGTAAAATCAGAGACAACAACAACCAAACTACTGATTCATGGAAGGAAGTCTCTCAAGGGGGTCGTATAGCATTTCAGGCTCTCTTTGCAAGAGAGAGGTTGCCACAAAGCTTTTCACCTCCTCAAGCAGCAGAGGATTTGAATGGAAAACAAATTAGCGACACGTCAATGCCATTGGCTCATAATAACTTGAACAAGATTCAAGATTCTTGTAAAGCAGACCAAAAAAGCGCAGTGAATGAAGAACCGGAGAAGAGCCTTAAAATGAGAGAGACAGGGTTTAAGCCATACAAGAGATGTTCCATGGAAGCGAAAGAGAGCCAAGTTGGAAACGCAAACAATCACAATGATGAAAAGGTCTGCTGCAAGAGGCTTCGTCTGGAAGCAGAAGCTTCAACATAA
Protein Sequence
- >Bo3g001090
MDTNTSDGPGEELLTKARKPYTITKQRERWTEDEHDRFLEALRLYGRAWQRIQEHIGTKTAVQIRSNAQKFFTKLEKEAEAKGIKALDIEIPPPRPERKPNVPYPRKPGPSSSQAKLVSSSQCNQPQVFLDLEKVPISEKTSTGKENQEENCSGVNKYPLPNNVVTPGKLKTFMESSDPSLRKASADNETSKASNVDNNMVHEENKDIDDDGLHSARHHPATTTSHQAFPAFPFRSFLHMSSTFSNLIMSTLLQNPAVNAAATFAASAWPFTTNAGASSTQMSSSPPTIAAIVAATVAAATAWWASHGLLPTPVPLPAVSVPTPAAMDNVRNDQLEKQRTAFQEQNMASKSPDSSSDGSEETGITKLKADGDKEEVVAALLDSNVSHKKNPVDRSSCGSNTPSGSDVETDALEKEKEADANQPSVIELSNRRSKIRDNNNQTTDSWKEVSQGGRIAFQALFARERLPQSFSPPQAAEDLNGKQISDTSMPLAHNNLNKIQDSCKADQKSAVNEEPEKSLKMRETGFKPYKRCSMEAKESQVGNANNHNDEKVCCKRLRLEAEAST