Information report for Bo2g137000
Gene Details
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Functional Annotation
- Encodes a nuclear localized member of the MYB family of transcriptional regulators that is involved in negative regulation of flowering. It is expressed in vascular tissues and at low levels in the shoot apex during the transition to flowering. Loss of function mutations are early flowering.EFM is involved in the autonomous, thermosensory and GA pathways and expression is directly regulated by SVP. EFM interacts with JMJD5 to repress FT expression.
Homologous
- Arabidopsis thaliana: AT2G03500.1
- Brassica napus: BnaA02G0327900ZS, BnaC02G0442300ZS, GSBRNA2T00020987001, GSBRNA2T00002968001, BnaA06G0396500ZS, GSBRNA2T00115286001, BnaC07G0284400ZS
- Brassica rapa: XP_009129087.1, Bra026548, XP_009152171.1, Bra025115
- Raphanus raphanistrum: RrC5786_p1, RrC12528_p1
Gene Resources
- Pfam: PF00249
- UniProt: A0A0D3AVQ1
- RefSeq: XP_013618499.1
- AlphaFoldDB: A0A0D3AVQ1
- KEGG: boe:106325025
- OMA: PNWMISA
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017930 , IPR044787
- PANTHER: PTHR31003 , PTHR31003:SF19
- SUPFAM: SSF46689
- PROSITE: PS51294
- Gene3D: 1.10.10.60
- OrthoDB: A0A0D3AVQ1
- SMR: A0A0D3AVQ1
- eggNOG: ENOG502QU6F
- STRING: 109376.A0A0D3AVQ1
- HOGENOM: CLU_036551_0_1_1
Sequences
gDNA Sequence
- >Bo2g137000
TGGCTTCCTCATCAGAACTAAGCTTGGATTGCAAGCCACAAAGCTACTCTATGCTTTTGAAATCATTTGGAGATAATTTTCAGACTGATCAAACCACACAAAAGCTTGAAGATCTTCTTTCTCGGCTCGAACAGGAACGCCTCAAGATCGATGCTTTCAAACGCGAGCTTCCCCTTTGCATGCAGCTCCTTAGCAATGGTACATATATTCACATATAGCATGTACACATATATAGTTTTGTATAATATGAATACAAAATATTTCATTTGCCACAAAATAAAAAATTACTTAAAACAAGAACAGAAACCTAACGAATAAAATCATTATTTTGTTATATAACGAGAAGAGTTTTTGAATTTCTTTTTACCTTTTCAAAAGATCTTTATTCATTAATTTAGGAATTTAACTCATAAAAATCAGAGCTTGCTTTTGAATTCTTTGAATTACAAAATTTGTTAACCCCTCCCATCACTGAAATCAACAAATTTAACTAAAGTAATTTTAAAGGTTATAAGGTTCGTGTTAGTTACATCTTTAACTCTAATGTTTCAAATTACTTTCATATCATTTTTCAGCTGTGGAAGTTTATAGACAACAGCTAGAAGCATATAGGGAAAATAGTAATAACAGCAACCAAAGTGTCGTCGCAAGACCAGTTCTTGAAGAGTTCATACCCTTAAGAAACCAACCCGAAAAGGAGAACAACAAAGGGAATAATTGGATGACGACTGCTCAGCTTTGGAGCCAACCTGAAACTAAACCAAAAAACATTGATCCAACTACAGATCAGTCTCCCAAAGACGAGCTTGCTAGTAGTCCAAAACTCGGACATTTTGATGTGAAACAAAGAAATGGTGGTGGGGCTTTTCTACCATTCTCGAAGGAAAAAACTTTGCCTGAATTAGCTTTATCTACGGAGGTCAAAAGAGTCTCCCCAACCAATGAACATACTAATGACCACGACTGTAATGGTGAGAGCATAATCAACGGTAGCAATAACAACAACAATAATAATTCTTCGACAACAAGTCAAAGTAATAGAAAGGCACGGCGTTGCTGGTCGCCTGATTTGCACCGGCGATTTGTCCAAGCTCTTCAAATGCTAGGCGGTTCACAAGGTACAAATGAGTACAGTTATTAAATTTATGTTTCAGTTTCATATTGGTTTACCATGGATAGTCTCACATAATCATCAACTAGTCACAATTATTATTTTTCTAGAACATTTGGGATTCCTCAAACAAATGTTCTAATTGAATCTAAATTCTGGTTTGGACTTTGTTCTAATATTTTATGAACAATATATAGTATGAAATTATGGATAAATTTGCCTTGGTTTTACTGTTGTTCATCTATACCAATTAGCAGTCATATTGTTTGAAATAAATTAACAAGTTTAAGTCGGAGTTTTTTATTGCAGTGGCTACACCTAAACAGATAAGGGAACTTATGAAAGTTGATGGTTTGACCAACGATGAAGTCAAAAGTCATCTCCAGGTAACCTACATGACAAGCCACCACAATATGCTTACTTTGAAAAAACTTTAACTCATAGTTAATTCTTTTATATTACTTTCAAAAACAGAAGTATCGGCTTCACACAAGAAGACCAAGCCCAAGCCCACAAACATCAAATGGGCAAGGCCCACACTTAGTGGTCCTAGGTGGCATATGGGTCCCACCAGAATACACCACCGCACACGGCGGCACTCCAACTCTCTACCACCACCAAGTCCAAAACCATCAAGGCAACGCGGCGGCGCAGCCTCCACCACACTTTTGCTCTCAAGAGTTTTACACAGCTCGTCCCCCACCACAACAGCTCCACCACCATCACTTTCAAACGTGTAACGGCTCATCCGCGGATGGCTCCGCGTCCACAGATTCAGCTCATCAGTTAATGGACAGTGCCGCCGATGATGGGAAATCGCCAGAGAGTGGTGGTGGCGAAAGAAAAGGACTGGCTGCTCTTAGGGAAGAAAGTGGCAATCAGAGCAATATTAATGGAAGTGAAATAACTCTCAAGTTCTAA
CDS Sequence
- >Bo2g137000
ATGGCTTCCTCATCAGAACTAAGCTTGGATTGCAAGCCACAAAGCTACTCTATGCTTTTGAAATCATTTGGAGATAATTTTCAGACTGATCAAACCACACAAAAGCTTGAAGATCTTCTTTCTCGGCTCGAACAGGAACGCCTCAAGATCGATGCTTTCAAACGCGAGCTTCCCCTTTGCATGCAGCTCCTTAGCAATGCTGTGGAAGTTTATAGACAACAGCTAGAAGCATATAGGGAAAATAGTAATAACAGCAACCAAAGTGTCGTCGCAAGACCAGTTCTTGAAGAGTTCATACCCTTAAGAAACCAACCCGAAAAGGAGAACAACAAAGGGAATAATTGGATGACGACTGCTCAGCTTTGGAGCCAACCTGAAACTAAACCAAAAAACATTGATCCAACTACAGATCAGTCTCCCAAAGACGAGCTTGCTAGTAGTCCAAAACTCGGACATTTTGATGTGAAACAAAGAAATGGTGGTGGGGCTTTTCTACCATTCTCGAAGGAAAAAACTTTGCCTGAATTAGCTTTATCTACGGAGGTCAAAAGAGTCTCCCCAACCAATGAACATACTAATGACCACGACTGTAATGGTGAGAGCATAATCAACGGTAGCAATAACAACAACAATAATAATTCTTCGACAACAAGTCAAAGTAATAGAAAGGCACGGCGTTGCTGGTCGCCTGATTTGCACCGGCGATTTGTCCAAGCTCTTCAAATGCTAGGCGGTTCACAAGTGGCTACACCTAAACAGATAAGGGAACTTATGAAAGTTGATGGTTTGACCAACGATGAAGTCAAAAGTCATCTCCAGAAGTATCGGCTTCACACAAGAAGACCAAGCCCAAGCCCACAAACATCAAATGGGCAAGGCCCACACTTAGTGGTCCTAGGTGGCATATGGGTCCCACCAGAATACACCACCGCACACGGCGGCACTCCAACTCTCTACCACCACCAAGTCCAAAACCATCAAGGCAACGCGGCGGCGCAGCCTCCACCACACTTTTGCTCTCAAGAGTTTTACACAGCTCGTCCCCCACCACAACAGCTCCACCACCATCACTTTCAAACGTGTAACGGCTCATCCGCGGATGGCTCCGCGTCCACAGATTCAGCTCATCAGTTAATGGACAGTGCCGCCGATGATGGGAAATCGCCAGAGAGTGGTGGTGGCGAAAGAAAAGGACTGGCTGCTCTTAGGGAAGAAAGTGGCAATCAGAGCAATATTAATGGAAGTGAAATAACTCTCAAGTTCTAA
Protein Sequence
- >Bo2g137000
MASSSELSLDCKPQSYSMLLKSFGDNFQTDQTTQKLEDLLSRLEQERLKIDAFKRELPLCMQLLSNAVEVYRQQLEAYRENSNNSNQSVVARPVLEEFIPLRNQPEKENNKGNNWMTTAQLWSQPETKPKNIDPTTDQSPKDELASSPKLGHFDVKQRNGGGAFLPFSKEKTLPELALSTEVKRVSPTNEHTNDHDCNGESIINGSNNNNNNNSSTTSQSNRKARRCWSPDLHRRFVQALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQTSNGQGPHLVVLGGIWVPPEYTTAHGGTPTLYHHQVQNHQGNAAAQPPPHFCSQEFYTARPPPQQLHHHHFQTCNGSSADGSASTDSAHQLMDSAADDGKSPESGGGERKGLAALREESGNQSNINGSEITLKF