Information report for Bo2g074020
Gene Details
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Functional Annotation
- RNA 3′end鈥損rocessing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.
Homologous
- Brassica napus: GSBRNA2T00064945001, BnaC02G0259600ZS, BnaA02G0195000ZS, BnaA07G0262400ZS, BnaC06G0293400ZS
- Brassica rapa: Bra007985, Bra003913
- Gossypium hirsutum: Gohir.D06G114601
- Saccharum spontaneum: Sspon.05G0029340-3D
- Setaria italica: SETIT_027602mg
- Setaria viridis: SEVIR_8G055000v2
Gene Resources
- Pfam: PF14327 PF14304 PF00076
- UniProt: A0A0D3APW1
- RefSeq: XP_013616293.1
- AlphaFoldDB: A0A0D3APW1
- KEGG: boe:106322718
- OMA: PPFHTGH
- InterPro: IPR000504 , IPR012677 , IPR025742 , IPR035979 , IPR038192
- PANTHER: PTHR45735 , PTHR45735:SF10
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 1.10.20.70 , 3.30.70.330
- OrthoDB: A0A0D3APW1
- CDD: cd12398
- eggNOG: KOG0108
- STRING: 109376.A0A0D3APW1
- HOGENOM: CLU_028601_4_0_1
Sequences
gDNA Sequence
- >Bo2g074020
TGGCTTCTTCTTCTTCATCCCAACGACGCTGCGTCTTCGGTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTGGATCTCAATCCCTTTCGATTTTTAAAACAATCGATCTTTCATATTTTTTCTCAGTTGGGAACATTCCTTACGACGCAACGGAAGAACAACTCCGAGAGATTTGCGGAGAGGTTGGACCCGTTGTCTCCTTCAGGTCAGTCTCCTTCTTCTTCAATTGGGAACTTAAAATCGTGTTTAGGGTATTAATAAAGGAAGCACCTTTCTTCTTCCTGATTTTCAGATTGGTTACTGATAGAGAAACGGGTAAACCAAAGGGATACGGGTTTTGCGAGTATAAGGACGAAGAGACAGCGCTGAGTGCTCGTCGTAATCTCCAGAGTTATGAAATCAATGGTCGTCAGTTAAGAGTTGATTTTGCTGAGAATGATAAAGGAACCGACAAACCCCGAGATCAGGTTCTACTCCTCTCCTTTTATCTAAATGTCGAAGCTTCCATCTTAGGACAATAAGTTATAACTAAAGGTGGTAACTTTTGATTAAGGGTCAAGGAGGAACTGGTTTGCCTCCTCCTGTTGCTGCTACTGGTATGTTTTTGTCAGTGTTCTAAAAATCGGTTTAGTTGGCGCCTGCTTGACAAATCGGACCTAAAAAGAACAATTATTCTTGAATGGTTTTTTTTTTATATAAAAATTGGTATAGATGCTCAAAAAAACCGGTTTAGGTTTCTGCCTAATCAATAATTTCATGTAAAACGCCTAACTACCACCGCATAGCTATTTCTTGAACATTGGTTTTTGTTTTAGCATGTGAAACTTTACTTGACTAGAACTATCTTTAGAGAGATAAAACTTGTGGTTGTTGTTTGGTGACAGAGTCTCAAAAGCAGGTTGGAGGGGCTGTGGATTCGAGTATGCATCAGCCGGTTGGTATCCACCTTGCTATGCAAGCCGCGTCTGTTATGGCAGATGCGCTAGGTGGTCCACAGGTCGGTTCGCAAAGTACGCTGCTGGTTCCAGCTAGTGATCCCCTGACTCTTCATCTTGCCAAGATGTCTAGAACTCAGCTCTCTGAAATTATAACGTCCATTAAGGTGTGAAGTTGTTCCCTTGATTGTGTATTGACGCATTGTTGAACTCTTGTGTACGAATGGTGTGAATGTGATTGTGACTGTGTTTTTTTTCTTAATGGTCAGTTAATGGCTACGCAGAATAAGGAAGAAACTCGTCAGTTGTTGGTTTCAAGACCTCACTTGCTAAAAGCTGTCTTTCTGGTACTACTTTCACATCTCCTGATTCTCCAAATCATTTTTCTCTTGTGCAATCTTTGTATTCCCTTAACTAGATGAGTCGATCTCCCAGGGTGTTACATTATGTTTTGTACACCATCTTTTGAACCTATACCTTCTCTGCTATTGTAGGCACAAATAATGCTTGGAATTGTGAGTCCACAAGTCGTAAGTTTCCATCTCTCTGAATAGTTTTGTGCGTCTTCCTTATCTATCTATCTGCTATTTCTTAAGAGGGCTGTTTCCATTCTTGAATTGTGCAGTTACAGACGCCAAATATTGTCCAGGCCCCAAACCATATGACAGGGTCTTCAATTCAAGACACACATCTCTCTGGATCTAGTCAAAGCCTTTTACCACCACTTGCACAAAGGCCTCAACAGCTAAACCGCCCTCCCCATAGTCAGTTTCCTGTTCAACAGTCTTCTAAACAACCTTTTAGTCAGATTCCACAACCAGGTGTGAATCCTCCTCCTAGATACCAAGTTAAAGGTCTCAGCGAAACCGCTTCTCCATTCCAACGCCAAAAACAAGTGGTTCCAGCTTCTAATGCTATCCAACCATCTCAAGTACCTCGGCCACCATTAACAAAATCTGCGATGCAGGTTTAGTGTGGACTATATGATCCTTTCCATTACGTTCTTACTTGTATTTGTCTTATAGAGTCTCTCTAAAGATTACTTCACGTCTATACTTTACAGCAAGGTGGGCAAATGGCATCACTAAACTATGGCAAAAGAATAAACAATGAGGGACCTCATGAATCAATAGATAGACCATCGAAGATGATGAGAGTGGACGATCGGAGAAACCCTCCATTTCATACAGGCCATGCGTCTAATTCAATGCTTCCAAATCCATTACAGCTACAAGAGAAAGCGCCTCAGGTATAAACCAATTTCACATAATTTGGAAGCTTAATTGGATGAGAAAATCGTTGATTGATTTATCTTTTTTTGGTCTAGGCGCTTCTGTCCCCGGATGTTCAGTCAACATTGCTCCAGCAAGTGATGAACCTTACGCCGGATCAGCTGAGGATGCTGACCCCAGAACAACAGCAAGAGGTGGTGAAGCTGCAGCAAGCTCTCAAGCAACAGGACCACGTGATGCAGCCTTCATAG
CDS Sequence
- >Bo2g074020
ATGGCTTCTTCTTCTTCATCCCAACGACGCTGCGTCTTCGTTGGGAACATTCCTTACGACGCAACGGAAGAACAACTCCGAGAGATTTGCGGAGAGGTTGGACCCGTTGTCTCCTTCAGATTGGTTACTGATAGAGAAACGGGTAAACCAAAGGGATACGGGTTTTGCGAGTATAAGGACGAAGAGACAGCGCTGAGTGCTCGTCGTAATCTCCAGAGTTATGAAATCAATGGTCGTCAGTTAAGAGTTGATTTTGCTGAGAATGATAAAGGAACCGACAAACCCCGAGATCAGGGTCAAGGAGGAACTGGTTTGCCTCCTCCTGTTGCTGCTACTGAGTCTCAAAAGCAGGTTGGAGGGGCTGTGGATTCGAGTATGCATCAGCCGGTTGGTATCCACCTTGCTATGCAAGCCGCGTCTGTTATGGCAGATGCGCTAGGTGGTCCACAGGTCGGTTCGCAAAGTACGCTGCTGGTTCCAGCTAGTGATCCCCTGACTCTTCATCTTGCCAAGATGTCTAGAACTCAGCTCTCTGAAATTATAACGTCCATTAAGTTAATGGCTACGCAGAATAAGGAAGAAACTCGTCAGTTGTTGGTTTCAAGACCTCACTTGCTAAAAGCTGTCTTTCTGGCACAAATAATGCTTGGAATTGTGAGTCCACAAGTCTTACAGACGCCAAATATTGTCCAGGCCCCAAACCATATGACAGGGTCTTCAATTCAAGACACACATCTCTCTGGATCTAGTCAAAGCCTTTTACCACCACTTGCACAAAGGCCTCAACAGCTAAACCGCCCTCCCCATAGTCAGTTTCCTGTTCAACAGTCTTCTAAACAACCTTTTAGTCAGATTCCACAACCAGGTGTGAATCCTCCTCCTAGATACCAAGTTAAAGGTCTCAGCGAAACCGCTTCTCCATTCCAACGCCAAAAACAAGTGGTTCCAGCTTCTAATGCTATCCAACCATCTCAAGTACCTCGGCCACCATTAACAAAATCTGCGATGCAGCAAGGTGGGCAAATGGCATCACTAAACTATGGCAAAAGAATAAACAATGAGGGACCTCATGAATCAATAGATAGACCATCGAAGATGATGAGAGTGGACGATCGGAGAAACCCTCCATTTCATACAGGCCATGCGTCTAATTCAATGCTTCCAAATCCATTACAGCTACAAGAGAAAGCGCCTCAGGCGCTTCTGTCCCCGGATGTTCAGTCAACATTGCTCCAGCAAGTGATGAACCTTACGCCGGATCAGCTGAGGATGCTGACCCCAGAACAACAGCAAGAGGTGGTGAAGCTGCAGCAAGCTCTCAAGCAACAGGACCACGTGATGCAGCCTTCATAG
Protein Sequence
- >Bo2g074020
MASSSSSQRRCVFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNLQSYEINGRQLRVDFAENDKGTDKPRDQGQGGTGLPPPVAATESQKQVGGAVDSSMHQPVGIHLAMQAASVMADALGGPQVGSQSTLLVPASDPLTLHLAKMSRTQLSEIITSIKLMATQNKEETRQLLVSRPHLLKAVFLAQIMLGIVSPQVLQTPNIVQAPNHMTGSSIQDTHLSGSSQSLLPPLAQRPQQLNRPPHSQFPVQQSSKQPFSQIPQPGVNPPPRYQVKGLSETASPFQRQKQVVPASNAIQPSQVPRPPLTKSAMQQGGQMASLNYGKRINNEGPHESIDRPSKMMRVDDRRNPPFHTGHASNSMLPNPLQLQEKAPQALLSPDVQSTLLQQVMNLTPDQLRMLTPEQQQEVVKLQQALKQQDHVMQPS