Information report for Bo1g144410
Gene Details
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Functional Annotation
- Encodes a MYB-like transcription factor similar to CIRCADIAN CLOCK-ASSOCIATED1 (CCA1) and ELONGATED HYPOCOTYL (LHY). Involved in the regulation of circadian clock by modulating the pattern of histone 3 (H3) acetylation.
Homologous
- Arabidopsis thaliana: AT3G09600.2, AT3G09600.1, AT3G09600
- Brassica napus: BnaA01G0382700ZS, BnaC01G0480600ZS, GSBRNA2T00072845001
- Brassica rapa: XP_009123305.1, XP_009123312.1, XP_009123299.1, Bra034074, XP_009146914.1, Bra029778
- Raphanus raphanistrum: RrC2045_p4
Gene Resources
- Pfam: PF00249
- UniProt: A0A0D3AEV8
- RefSeq: XP_013639659.1
- AlphaFoldDB: A0A0D3AEV8
- OMA: VISPHQE
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017884 , IPR017930
- PANTHER: PTHR12802 , PTHR12802:SF115
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS51293 , PS51294
- Gene3D: 1.10.10.60
- SMR: A0A0D3AEV8
- CDD: cd00167
- eggNOG: KOG0724
- STRING: 109376.A0A0D3AEV8
- HOGENOM: CLU_052430_0_0_1
Sequences
gDNA Sequence
- >Bo1g144410
TAAGATCGCTTGTTGAGTTCTGGAAAAATGAGCCAGTGGTAACGCTTGGGAGCTCGGTGTTCACCACATACAATGAGAGTGCTTTCCTCTGCAGCTTCATTATAGTCGGACTAGCTAAGGTTAGATTGTATTTGATCACGCAAGGGTAGGGTAATAGCGCACCAACGATATAAAAGAAGTGACACCAACTATTGACTTAGAGAAGTCTAATGGTTCAGACTGTGACAAAGTCATCATAAATGTAACACTTACAGCGGATTCGAACTCAGGGTTTGATAAGTTAACTGTGAGGTTTCTCGTTAATAACAGAACCTGCCAAACAATTCTACAGTTAGTGAAGCTTGTACATCAAGTAAACTGAAAGTTTTACAAGCTCTGGCTCACAGTTTCAAAATTTATAGGATCCATTTCCTTGAGCTTTTCAACGTGATCCAGTCTCGTTTCAGGATCGAAGACACTCCCGATGAAGCTATAAACTTCAGCAAAATCAGGAACACCTGCATAGAAATCATCAGTAAAAATATAGTTTGAAAAAAAAAGAACAGAACATACAACTGTTCACAAATGATTACCTTGAAGCACCACCATAGGCTGTTTTGCTACAATCTCAGAACCTGATATAGTTCGGCTTGAGCTTCCCATACCGGATGTGGAAGGGCTACTAACATTTAATGGTCCTATATCAGCTGAATCAGATGGCGTTATATGCCATAAATAAGCACATGAAACGTCCTAAAAATGAAGCCTATTCTACTACAAAAAAAGAAGAGAGAAGAAACAAATTGAAAACACAGACTAAAGAGCGTGCCTTGTGCTCCACGAAAGGTAGCATGTTCCTGATGTGGTGAAATTACTGTGTTTAGCAGCATTGATGCGTCATCCCAAGAAGTTGAAACTTGAAGTTGCATTTGAGCTGTGTGAAAAAATGGATTCAAAACTGAGGTTAATTAAAAATGAGTATTGCAAAAACTATCTAACCGTTCTTAGATGCCTTTTGAGGATAGGGATGAGCTGCTTTGCGTTTTGGCCGAGGGGGTGGTACATGTGCTAGTGTCCCGTTTTTCTGAACCTTTAGAAAGTATTTTTGAGCATGGCTCCTTATCTATAGTAAAATCAAGAAGGCAGCAGAGGAATAATAAGTTGAAAACGTGTCAAAGTAAATTCAACCAAAACTTAGGGTAAGCTATTCCTTCAGACCTGAATCACAGTCTTGGAACCCACGAAATCTTCTATCTTCTTCCAGTCACGACCAAACCTAAGGAACAGTGGCCAGTACTATCAGCCTCAGATCAATAAGACTATATATCATTCAGCAGTTTGAGCATTACATTAAAAATAATGAATTTAAGAAAATAAAATAATGAAAAGTTCTTACACAAAGAGGACAACCATGCTTCTACTCCAATAAAATATCAACTATCATTTAACATGAATTAAAGTTCAACATGAGCTGCTACACAAGTTTAACTCTACTTACTACAGAAAAGAACTTAAAACATCAGACTATATATATACATATCAGTTTAACTCAACGAAGCAGACCTAACATAGTTTTGTCTTTGGTTCAGTCTATGAGTAACTTAGCTTAGAAATGATCAAGCAAGATTAGAAAGCTTCAAGACTCTAAGGACACACGTAAATATATCATGCCAAGGAGAAACAGAGCAATAGATTAGTACAGTTGAAGCGCTTCAAGAAACTTGTCGTGCTCTTCCTCTGTCCAGCTCTCCCTGGACTTGGTGATGGTATAAGGTTTCCTCACCTTCTTCGACGAACCTTCCGCCACGGCATCCGTCGATTGTGGTGCTTCGGCGGACGTCGGATTCCTTGACAATGATGAGCTCAT
CDS Sequence
- >Bo1g144410
ATGAGCTCATCATTGTCAAGGAATCCGACGTCCGCCGAAGCACCACAATCGACGGATGCCGTGGCGGAAGGTTCGTCGAAGAAGGTGAGGAAACCTTATACCATCACCAAGTCCAGGGAGAGCTGGACAGAGGAAGAGCACGACAAGTTTCTTGAAGCGCTTCAACTGTTTGGTCGTGACTGGAAGAAGATAGAAGATTTCGTGGGTTCCAAGACTGTGATTCAGATAAGGAGCCATGCTCAAAAATACTTTCTAAAGGTTCAGAAAAACGGGACACTAGCACATGTACCACCCCCTCGGCCAAAACGCAAAGCAGCTCATCCCTATCCTCAAAAGGCATCTAAGAACGCTCAAATGCAACTTCAAGTTTCAACTTCTTGGGATGACGCATCAATGCTGCTAAACACAGTAATTTCACCACATCAGGAACATGCTACCTTTCGTGGAGCACAAGCTGATATAGGACCATTAAATGTTAGTAGCCCTTCCACATCCGGTATGGGAAGCTCAAGCCGAACTATATCAGGTTCTGAGATTGTAGCAAAACAGCCTATGGTGGTGCTTCAAGGTGTTCCTGATTTTGCTGAAGTTTATAGCTTCATCGGGAGTGTCTTCGATCCTGAAACGAGACTGGATCACGTTGAAAAGCTCAAGGAAATGGATCCTATAAATTTTGAAACTGTTCTGTTATTAACGAGAAACCTCACAGTTAACTTATCAAACCCTGAGTTCGAATCCGCTTCCGACTATAATGAAGCTGCAGAGGAAAGCACTCTCATTGTATGTGGTGAACACCGAGCTCCCAAGCGTTACCACTGGCTCATTTTTCCAGAACTCAACAAGCGATCTTAA
Protein Sequence
- >Bo1g144410
MSSSLSRNPTSAEAPQSTDAVAEGSSKKVRKPYTITKSRESWTEEEHDKFLEALQLFGRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKASKNAQMQLQVSTSWDDASMLLNTVISPHQEHATFRGAQADIGPLNVSSPSTSGMGSSSRTISGSEIVAKQPMVVLQGVPDFAEVYSFIGSVFDPETRLDHVEKLKEMDPINFETVLLLTRNLTVNLSNPEFESASDYNEAAEESTLIVCGEHRAPKRYHWLIFPELNKRS