Information report for Bo1g139580
Gene Details
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Functional Annotation
- KHZ1 is a CCCH zinc-finger and KH domain protein belonging to the VII subfamily. It is expressed throughout the plant. Highly similar to KHZ2. khz1 mutants are late flowering and double mutants with khz2 are even more late flowering. Overexpression leads to increased rates of leaf senescence.
Homologous
- Arabidopsis thaliana: AT3G12130.1, AT3G12130
- Brassica napus: BnaC01G0461100ZS, BnaA01G0369400ZS, GSBRNA2T00088405001
- Brassica rapa: XP_009120938.1, XP_009120931.1
- Raphanus raphanistrum: RrC1437_p4
Gene Resources
- Pfam: PF00013 PF00642
- UniProt: A0A0D3AEC2
- RefSeq: XP_013596121.1 , XP_013596188.1
- AlphaFoldDB: A0A0D3AEC2
- KEGG: boe:106304229
- OMA: RFAKGNC
- InterPro: IPR000571 , IPR004087 , IPR004088 , IPR036612 , IPR036855 , IPR045877
- PANTHER: PTHR12547 , PTHR12547:SF173
- SUPFAM: SSF54791 , SSF90229
- PROSITE: PS50084 , PS50103
- Gene3D: 3.30.1370.10 , 4.10.1000.10
- OrthoDB: A0A0D3AEC2
- SMR: A0A0D3AEC2
- CDD: cd22464
- eggNOG: KOG1677
- STRING: 109376.A0A0D3AEC2
- HOGENOM: CLU_045191_2_0_1
Sequences
gDNA Sequence
- >Bo1g139580
TGGATACTCGTAAGAGAGCTGGCTCATTCAACTCCAATGGCGGCGGCGGCGGCGGCGGATCCAAGAAGTCTAAGCAAGGTTAGCTCTTTCACTCTTTCTCAATATCTTCCGTTTTGTCTGAGAAATTGTGAAAGCTATTATAACTCTGCTTGAATTATTATTATACCCAATCTTTACAGTTAAATTTGAGATCTTTATTTGCTGGATGAATACTCTTTTGTTTTTGTGTGAATTGGATTTTGGCTAGTGATGATTTGTTCAATTTGAGTACCGTACTACTATTATTGAGCAAAAAAGTAGCTTTTTTTTTTTTTGTAAAGCTAGTAATGAGATTTACTAAGACGCAAGTTTAAGTCTTTTTTTTTTCATTACTGCTTTGTCTTTTTCTTTGGTTCTCACTTATGTGGCCAATTAGCTAGATTTTTACATCTTAAACTGCTTGCCGTTTTTCTGTCTGATGCACAATTTAAATTTATTGTTCAGTTGAGTAACACCCACAAGCTTATGTTTTTTTTTTCGAAGTTACTTTAGTTCCAATTTTGCTTTTAGTAAACCATGTTCAGTTGAGTAAGACAGCCCATGTCTTTTCCTTTGTCGGATTGATGTGTCCTGAAAATTTACAGAAGGTATCATGCAGCTTTAATTCTTAAGTCTCAAGTTTCATATGGATGAAAAGTATGAATGGTGTCATATTATTGAACTTGAGAAAACTCTTAACTAAAGAATAAAAACACACTTAAATGTTTGGAACAGAGATGGAATCATATTCAACTGGTTTAGGCAGCAAATCCAAGCCTTGCACTAAATTTTTCAGGTTATAAATTTATAATCCTTTTTTTTCTTAACTGGATTAATATTGAAAATTGTTAATTGTCAAATTAACAAGTAAAACTGTATGCTAATGAAGTGGTTAATTGTTATTACAGGTACTTATAAATCATTGATCCTAAACAAGTTAAAAAAAAAGTTTCAATAAGAGATAAGTGCATCTGGATTATAATCATAGAAACGTTCAACTCAATTGGTGATCATAACGTTCGAAATCAAACTATAACTTGTTTAGAAAATTGCTATAATTTTCTGTTTGGTGGTAAGGTGTTAGTGATGTTGTGTTTATAACATGGTCATATATGGTCAGGTTCAGGTAAGTTTATTACATTACTGGTGGTGACTAATTGGTTCCTTGTGTATAGCAATTGATACTTCCTCTGTATTTTAACCGTTTGTTCTCAACTTCTCTTGTGTCATCTTAAGGGAAATGGTTTTAACTATCTGATGTCTTTATTATGCTCTATTGCAGCACTTCTGGCTGTCCTTTTGGAGATAACTGCCACTTCTTGCACTATGTACCCGGAGGATACAATGCTGTAGCACAGCTGACAAACATGGCACTACCCATGCCTCAAGCTTCCAGAAACATGCAAGGACCTGGTGGTGGTGGAGGAGGGAGATTCTCAGGGAGAGGAGGAGAGTCTGGACCTGGCCATGTGTCTAGCTTTGGCGCCTCAGCCACTGCGAAAATCAGCGTGGACGCTTCGTTGGCCGGAGCCATCATCGGTAAAGGAGGAGTCAGTTCGAAGCAGATATGTCGTCAGACGGGGGCGAAGCTGTCGATTCAAGATCACGAGAGGGACCCGAACCTGAAGAACATTGAGCTTGAAGGGACGTTTGAGCAGATAAACGAAGCGAGTGTGATGGTTAGAGAGCTGATTGGGAGGCTTAACTCTGCAGCTAGTAGGAGACCACCTGGTGGTGGTGGTGGGATTGGTGGTGGGGTTGGTTCGGAAGGGAAACCACATCCAGGGAGCAACTTCAAGACGAAGATGTGTGAGAGGTTCGCGAAAGGGAACTGTACGTTTGGGGATAGGTGTCACTTTGCGCACGGGGAAGCAGAGCTGCGCAGGTCAGGAATTGCCTAA
CDS Sequence
- >Bo1g139580
ATGGATACTCGTAAGAGAGCTGGCTCATTCAACTCCAATGGCGGCGGCGGCGGCGGCGGATCCAAGAAGTCTAAGCAAGAGATGGAATCATATTCAACTGGTTTAGGCAGCAAATCCAAGCCTTGCACTAAATTTTTCAGCACTTCTGGCTGTCCTTTTGGAGATAACTGCCACTTCTTGCACTATGTACCCGGAGGATACAATGCTGTAGCACAGCTGACAAACATGGCACTACCCATGCCTCAAGCTTCCAGAAACATGCAAGGACCTGGTGGTGGTGGAGGAGGGAGATTCTCAGGGAGAGGAGGAGAGTCTGGACCTGGCCATGTGTCTAGCTTTGGCGCCTCAGCCACTGCGAAAATCAGCGTGGACGCTTCGTTGGCCGGAGCCATCATCGGTAAAGGAGGAGTCAGTTCGAAGCAGATATGTCGTCAGACGGGGGCGAAGCTGTCGATTCAAGATCACGAGAGGGACCCGAACCTGAAGAACATTGAGCTTGAAGGGACGTTTGAGCAGATAAACGAAGCGAGTGTGATGGTTAGAGAGCTGATTGGGAGGCTTAACTCTGCAGCTAGTAGGAGACCACCTGGTGGTGGTGGTGGGATTGGTGGTGGGGTTGGTTCGGAAGGGAAACCACATCCAGGGAGCAACTTCAAGACGAAGATGTGTGAGAGGTTCGCGAAAGGGAACTGTACGTTTGGGGATAGGTGTCACTTTGCGCACGGGGAAGCAGAGCTGCGCAGGTCAGGAATTGCCTAA
Protein Sequence
- >Bo1g139580
MDTRKRAGSFNSNGGGGGGGSKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGDNCHFLHYVPGGYNAVAQLTNMALPMPQASRNMQGPGGGGGGRFSGRGGESGPGHVSSFGASATAKISVDASLAGAIIGKGGVSSKQICRQTGAKLSIQDHERDPNLKNIELEGTFEQINEASVMVRELIGRLNSAASRRPPGGGGGIGGGVGSEGKPHPGSNFKTKMCERFAKGNCTFGDRCHFAHGEAELRRSGIA