Information report for Bo1g042950
Gene Details
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Functional Annotation
- Encodes a member of the GATA factor family of zinc finger transcription factors. Modulate chlorophyll biosynthesis and glutamate synthase (GLU1/Fd-GOGAT) expression.
Homologous
- Brassica napus: GSBRNA2T00157484001, BnaC01G0199300ZS, GSBRNA2T00149587001, BnaA01G0156600ZS, BnaC07G0469200ZS, BnaA03G0491000ZS, GSBRNA2T00064418001, GSBRNA2T00075299001, GSBRNA2T00075300001
- Brassica rapa: XP_009142013.1, Bra026461, XP_009137582.1, Bra019118
- Raphanus raphanistrum: RrC3834_p4
Gene Resources
- Pfam: PF00320
- UniProt: A0A3P6FW13
- EMBL: LR031878
- AlphaFoldDB: A0A3P6FW13
- OMA: RIMHRMA
- InterPro: IPR000679 , IPR013088 , IPR052138
- PANTHER: PTHR47255 , PTHR47255:SF4
- SUPFAM: SSF57716
- PROSITE: PS00344 , PS50114
- Gene3D: 3.30.50.10
- SMR: A0A3P6FW13
- CDD: cd00202
Sequences
gDNA Sequence
- >Bo1g042950
TGGGTTCGAGTTTTCATTACACTATAGATCTCAATGAAGATCAAATCGACCAACCTTTTTTCTCTCATCTTGGATCCTCTCTTCATCATAACCAGCATCATCATGATGATGATCATTTAGCTCCTTCTAATCTCTCTTCTTCATCATCTTCTTTGACTCCATCATCTCTTTCCCACCTCTCTTTCTTTATCAATTCTCACCAAGATCAAATACATGTTGGGTACAACAACAACACTTTTCAAGGTTTTCTTGATCCCCATCTCTCCCAATCACTTGAGGTATAAAATTTGAAGTGAATGATAAATATACCAATATTTTTGATGATGACCCCAGATATATTGTGTAGTATTTATATATGAAAATTTAACTAACCAATTTATTTTACAATGATCTTATGAAATTTCCAGACCAAGAAGTTTGTATCTAATAGTGGATCACCATCAAGCGATCAAGTGGTGCCAAAGAAGGAGGCACGACTAAAATTGACGAAACGGAAGAAAGACAATCATCATGATCATGAACAGGTGAAATTGATGAAGAGGAAGACGATGATCACCACCACTGAGAACAACAAACAACACGTTAATAACGACCAATCCATGAACAAAAGAAATTTCGAAGGAGATGACCATGATCATCTCAAGAAAATCTCGGCAAATCAGTACAATATAGTCAACGAGACTGGTTATAACGGAAGCAACAATGGCGTGATTAGGATCTGTTCCGATTGTAACACGACCAAGACTCCTCTTTGGAGAAGTGGTCCGAGAGGTCCCAAGGTAACCAACCAAATATTACTAATTAATTAAACAAATTAATTTCAAACAAATTAAACAAACAAATTAATCAAAAAAAAAAAGCTCTCTCAGAAATTTGATGTCTTTTTAAAAACTTATAATTAATATCAAAAGAAACATAAATCTATTAAATCACTAACAGAAATCATCCAGTTTGCTATATAGATTTTAGGTAGTAATTCTGAGTAGCTTTAACAAAATCCTTTAAATAATATTTCATCCGTTTCAAAATGTTGCATATTTTAAAATTTTCATACATTTTAATAAAACACATTAAATGTGTATAATTTTTTGTGATTATATTTTTTCCATAATTTTAAGTCAATAAAAATTTAATAAGTGCAGTTAAATTTTTTGAAGTTTACAATTAATTAATAAAACATGCATTGAAAATGTAAAAAAAAAATATTTTTGAAACAAATTTTTTCTCTAGAATATGTAACTTTATGAAACGGAAGGTACCTTCTAGAAGTTTTCTCTCGCAATATGATTAATGGGAATTAATTAACTAATTAATGCTCATGTTGGTTTTGTTATTACAGTCTCTATGTAATGCGTGTGGGATAAGGCAAAGGAAGGCGAGGCAGGCTGCTATGGCAGCTGCAGCCGCAACCACAAACTCTGAGTACTTGTCACCACCCCTCCTGAAAAAGAAGATGCAAAGCAAGTACAAAAGATCAAATGAAGTTAGCAACCTCTATTCTTCTTTGGCTTCAAAGGTAAAGAAATGTAAGAGCATGAGTACATCGGTGGAGGAGGCAATATCGGTGATGGAGCGCACAGCAGCCGAGACTCAAGGCAAGTCCACTATGTCGAGATCTTCCTCGACATCTTCCTCTTCAAACAAGTTTTATTATGATGATCTAGCGATGATCTTGAGCAAAAGCTCAGCTTATCAGCAAGTTTTCCCTCAAGATGAGAAGGATGCTGCCATTTTACTAATGGCTTTATCGTACGGAATGGTTCACGGGTGA
CDS Sequence
- >Bo1g042950
ATGGGTTCGAGTTTTCATTACACTATAGATCTCAATGAAGATCAAATCGACCAACCTTTTTTCTCTCATCTTGGATCCTCTCTTCATCATAACCAGCATCATCATGATGATGATCATTTAGCTCCTTCTAATCTCTCTTCTTCATCATCTTCTTTGACTCCATCATCTCTTTCCCACCTCTCTTTCTTTATCAATTCTCACCAAGATCAAATACATGTTGGGTACAACAACAACACTTTTCAAGGTTTTCTTGATCCCCATCTCTCCCAATCACTTGAGACCAAGAAGTTTGTATCTAATAGTGGATCACCATCAAGCGATCAAGTGGTGCCAAAGAAGGAGGCACGACTAAAATTGACGAAACGGAAGAAAGACAATCATCATGATCATGAACAGGTGAAATTGATGAAGAGGAAGACGATGATCACCACCACTGAGAACAACAAACAACACGTTAATAACGACCAATCCATGAACAAAAGAAATTTCGAAGGAGATGACCATGATCATCTCAAGAAAATCTCGGCAAATCAGTACAATATAGTCAACGAGACTGGTTATAACGGAAGCAACAATGGCGTGATTAGGATCTGTTCCGATTGTAACACGACCAAGACTCCTCTTTGGAGAAGTGGTCCGAGAGGTCCCAAGTCTCTATGTAATGCGTGTGGGATAAGGCAAAGGAAGGCGAGGCAGGCTGCTATGGCAGCTGCAGCCGCAACCACAAACTCTGAGTACTTGTCACCACCCCTCCTGAAAAAGAAGATGCAAAGCAAGTACAAAAGATCAAATGAAGTTAGCAACCTCTATTCTTCTTTGGCTTCAAAGGTAAAGAAATGTAAGAGCATGAGTACATCGGTGGAGGAGGCAATATCGGTGATGGAGCGCACAGCAGCCGAGACTCAAGGCAAGTCCACTATGTCGAGATCTTCCTCGACATCTTCCTCTTCAAACAAGTTTTATTATGATGATCTAGCGATGATCTTGAGCAAAAGCTCAGCTTATCAGCAAGTTTTCCCTCAAGATGAGAAGGATGCTGCCATTTTACTAATGGCTTTATCGTACGGAATGGTTCACGGGTGA
Protein Sequence
- >Bo1g042950
MGSSFHYTIDLNEDQIDQPFFSHLGSSLHHNQHHHDDDHLAPSNLSSSSSSLTPSSLSHLSFFINSHQDQIHVGYNNNTFQGFLDPHLSQSLETKKFVSNSGSPSSDQVVPKKEARLKLTKRKKDNHHDHEQVKLMKRKTMITTTENNKQHVNNDQSMNKRNFEGDDHDHLKKISANQYNIVNETGYNGSNNGVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARQAAMAAAAATTNSEYLSPPLLKKKMQSKYKRSNEVSNLYSSLASKVKKCKSMSTSVEEAISVMERTAAETQGKSTMSRSSSTSSSSNKFYYDDLAMILSKSSAYQQVFPQDEKDAAILLMALSYGMVHG