Information report for Bo1g039080
Gene Details
|
|
Functional Annotation
- Encodes a MADS-box protein involved in flowering. Regulates the expression of SOC1 and is also upregulated by SOC1. Binds with IMK3 kinase domain. Phosphorylated by IMK3; likely to be a target for IMK3 kinase domain.
Homologous
- Brassica napus: BnaC01G0180300ZS, GSBRNA2T00116099001, GSBRNA2T00056321001, GSBRNA2T00048970001, GSBRNA2T00154448001
- Brassica rapa: XP_009138207.1, XP_009138200.1, XP_009138194.1, XP_009138187.1, XP_009138179.1, XP_009138171.1, XP_009138166.1, XP_009137455.1, XP_009137454.1, XP_009137453.1, Bra019221
- Raphanus raphanistrum: RrC4106_p1
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: A0A0D3A600
- RefSeq: XP_013583417.1
- AlphaFoldDB: A0A0D3A600
- OMA: PYHQLEN
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- SMR: A0A0D3A600
- CDD: cd00265
- eggNOG: KOG0014
- STRING: 109376.A0A0D3A600
- HOGENOM: CLU_053053_14_1_1
Sequences
gDNA Sequence
- >Bo1g039080
CATTCCCAAGATGGAAGCCTAACAAAATAAAAGAAACCAACACAATAAGTAACATCGACATATTCCACACACTGAATGTATATCTCCACTGAATTAGTTAATTATACCCAAGCTTAAGGGAAGTATCTGAGAAGTCATCTTCAATGGGAGCTCCACTGTCATAGCTTGACACATTTGTGGTCGCCGACTCTGTCTCCACAGCCTCCTTTAACGCCATCGTTTTAGCCATTTCCAACGTCACTAGCTAATATTTGTATTATTATAATGAATCAGAATACTAATACTATAAATATGGAATTGTTTCTATGAAGGTACAAGAGCCATACTTGCTCCCTCAGTCTTCTATTCTCATCCACCAACTCTGATCCCTGCGTGTGTTTACCTCACTTATTAATATGCATACTTACATGTAGGCTTAATCATTATGTTATCCATAACACAAATTGTACTTATTACCCGTTTCTCAAGTGAAGATATCTGGCTCATCACACATTCGCCCTAGTTAACAAAAACAACAACAACAATGTTACATTTTTATATATTTATACAGCTTATAGTTACTATATGTCACGTTACAAAAATGTGCTTGTTATTAGTCTATGATTTAGTAATGAACCTTCTTTTCAGACACACGACTAAGTCCACATTCAAGCGATTTCTCCAGCCGCTGCAACTCTTCTAAGTTCAATCCTTCAAGATCTTCCCCTCTCATTTGTCTAGGATTACATTAGAGTACCACATGAAAATCACATTTTTATATACATTTTCAAGTTTATAACGAAGCTCTTAAACCCACATCGCACACATTAAGCATACAATACTACTAATATGGATATTGAAAAAAATCTCACATAGATTAAGAAGAAACCAAGCTAACGTCGTATAATATCCACGAACGCCTCAACTAGTAAGGTACATAGCTTTGAAGTTTTGTATTGAACTCACGCAATACCAGCTATGTAAACTAATACTAGATGTTATAGCGATATAAAGTTTGATAAAAGGAGAATTATGGGTCATATTTGAAAACTACTAAACTCTTTTAAGCTTTAGAAATAATTTTTACAACCTGATAAATAAGACATCGAAAAAACTACCCATGAAATGAAATAGCTTCTTTTTCTTAGATGAATAGATTCTAAAACATATAAGCAACATTCATACATTGTCTTCAAAACATAAAAAATAATTTATCATGAAAGATTTGTTTATCAGCATAGCATATAGATGAAGCCATACCTGAGCTGCTTGGTTTTGTCTTCGACTTCCTTACTTAGTCGGGAGAGGTTACAATTCTCTAGCTGCTAGATGCAAAGTCAACATTTTCAGGTTCTGTAACTGATATGTTGAACCAAGTACGTAATTACATGCTTCAAGATTAATGCTGCATTGATGCTAGCTAGTTAACTTTGTAACTTCATGTCTCTATATGTGGACTTACACCAAACAATTCAAACAATCTCGCATAAAAAGTGAAGATTAGCGGATAATATAGAGACAAGACAAGGGTTTGATAAAATAACTATAGAAGAGAGTGAGTGATAATGAGAATACCTGGTGATACGGAGAAGGTGGACCCATCATTTTGTTGATGTTACTTGCATGAAGATTATACCTTCCCAAGATGTCTCTCATACTACACGTATCAACAAACAATCCATCTTTCATAAAGCTTTCCTTCGTCCATATATGCAATTTATTAAATTAATAATCTAAAGAATACACTGGAACCCTTTTTTTAGTTACCAAAAAGAAGAAAGAAATCAAAAGTATCAAGTCAAACATGTGCAGATGATATTTATTGGATGACTCCATTAGAGTTATGGTAATATATGCTTATCACAATAAATAAACGAGTGATTAATACTTAATCCACAATCAAACCAAAAGTGACTGTCAAAGACTTTTGTAATACAAAATAAAGTAAGAGAAAGAGAAAAAGAAGTCCATTCTAATTGTGGTAAGTACCATGTATCCATATATATACACTTGCTTGCATAACTTAGCACAGTTACAAAAAAAATATTATACTCTCCCCTTTTAGATTATAGAAAAGTTATCATATGTCTAAATGAAAATGGTTAAGAAAAGTAAATAACCTATACTTAATTATGTAGTTATGTTTTCATTATGTTACATATTAACGTAATTACAGGATGAGTAAGGTCATAGTAAACATAATTCTTATATTCTTATTGGAAGAAAGGGATAAGAGCAAGTACAATTATGTTAGGTCGTCAGAATCTTTTATTTTTACTGCTTCAATATATATTATCAAATTATGCCGTGACACGCAGCTAACTACGTATATGATTTCTCCGAGCCCAAGAATAAATTATTTTAGAGAGTAAAAAATAACTAAAAGTCTCATATAATTACATATCTTAACAATATTATCATCTCTCAAACCAAAGATTGAAAAGAGAAATGATAGAAATTTTATAAAATGAAAGTACACATACCTTGAGCTAGAGAATTCGAAGAGCTTTCCAGTAGCAGAGAAGATGATGAGAGCAACATCAGCATCGCAAAGAATCGAAAGTTCATTGGCTTTCTTGATGATTCCCCTTCTTCTCTTAGAGAAAGTAACTTGTCTCGCTGTTAGGTTATCTATCTTCTTTATCCTTATCTTCTCTCTCGTCAT
CDS Sequence
- >Bo1g039080
ATGACGAGAGAGAAGATAAGGATAAAGAAGATAGATAACCTAACAGCGAGACAAGTTACTTTCTCTAAGAGAAGAAGGGGAATCATCAAGAAAGCCAATGAACTTTCGATTCTTTGCGATGCTGATGTTGCTCTCATCATCTTCTCTGCTACTGGAAAGCTCTTCGAATTCTCTAGCTCAAGTATGAGAGACATCTTGGGAAGGTATAATCTTCATGCAAGTAACATCAACAAAATGATGGGTCCACCTTCTCCGTATCACCAGCTAGAGAATTGTAACCTCTCCCGACTAAGTAAGGAAGTCGAAGACAAAACCAAGCAGCTCAGACAAATGAGAGGGGAAGATCTTGAAGGATTGAACTTAGAAGAGTTGCAGCGGCTGGAGAAATCGCTTGAATGTGGACTTAGTCGTGTGTCTGAAAAGAAGGGCGAATGTGTGATGAGCCAGATATCTTCACTTGAGAAACGGGGATCAGAGTTGGTGGATGAGAATAGAAGACTGAGGGAGCAACTAGTGACGTTGGAAATGGCTAAAACGATGGCGTTAAAGGAGGCTGTGGAGACAGAGTCGGCGACCACAAATGTGTCAAGCTATGACAGTGGAGCTCCCATTGAAGATGACTTCTCAGATACTTCCCTTAAGCTTGGGCTTCCATCTTGGGAATGA
Protein Sequence
- >Bo1g039080
MTREKIRIKKIDNLTARQVTFSKRRRGIIKKANELSILCDADVALIIFSATGKLFEFSSSSMRDILGRYNLHASNINKMMGPPSPYHQLENCNLSRLSKEVEDKTKQLRQMRGEDLEGLNLEELQRLEKSLECGLSRVSEKKGECVMSQISSLEKRGSELVDENRRLREQLVTLEMAKTMALKEAVETESATTNVSSYDSGAPIEDDFSDTSLKLGLPSWE