Information report for Bo1g008560
Gene Details
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Functional Annotation
- Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM.
Homologous
- Arabidopsis thaliana — AT4G32980
Gene Resources
- Pfam: PF05920 PF07526
- UniProt: A0A0D3A2D0
- RefSeq: XP_013616985.1 , XP_013616989.1
- AlphaFoldDB: A0A0D3A2D0
- KEGG: boe:106323393
- OMA: AFTSCYE
- InterPro: IPR001356 , IPR006563 , IPR008422 , IPR009057 , IPR050224
- PANTHER: PTHR11850
- SUPFAM: SSF46689
- PROSITE: PS50071
- Gene3D: 1.10.10.60
- OrthoDB: A0A0D3A2D0
- SMR: A0A0D3A2D0
- CDD: cd00086
- eggNOG: KOG0773
- STRING: 109376.A0A0D3A2D0
- HOGENOM: CLU_587099_0_0_1
Sequences
gDNA Sequence
- >Bo1g008560
TGGACAACATCAACACTTATAGTTCTCTGGACAATGTTATGACTAACCAAAACCATCTTCTCATGGATTTGATACCTTCAAGAGAAGATTCCACATCATTTCCAACAATGCTTCCATGGAATTCCATCAGACAAGATCCTCTACAAATGGGTGTCTTTGATATCTTCAACTCTTTTCTCACTAACAAGTACTTATCATCTACTTCAAGATCTACAAATGTTCATGAAACCAGCTTTGAGGCCATGGCTCCTCCTCCTTCACTTCATCCTATGGATCATCTAAGACCATATGATGATCCCTCAAACAACATGTGGAGTCTTGGTGAAAATAGTGAGTTTCATGCATATCCATTCATAGAAGGTGTTGTTGGTCCTAGTGAACCAATAATATCTACATTCGGTGAAGAATTCCCAAGAAACGAGTTCTCGTTAAGTCTTGCCACTGATGTTTCTGATGAGTGCTCGGAGATAAGTCTTTGTGCTGCTACTAAATCTACTAGAATAACCTCAGAGCAAGCTTCTTCCAGCAGCAAAGACATGTCAAACGTCTCTCAAGTCATATTTTGCTCCAAGTACCTTCACTCTGTTCAAGAAATACTATCTCATTTCGCCACATACTCCCTCAAAGGCTTAGAGACTAATCCTCAGTGCTACTTTTCATCTCGAGGAACCGAGTCAGAGGGTACAAACTCAGCCTTTACTTCATGTTATGAGAATCTAAACGAGTTTCTTGATGGCGGTTCGCAAAGACAAGCATTAGAAGCAAAGAAAACCCATCTCTTGGATCTTCTTCAAATGGTATAATAATATATATTCACACATTGTTACACAAGCTAAGAAATTATTTACTAATTACTGAAAGTTTTTTCGAGTTGATTTTTGTCTTCAGGTTGATGACCGATATAGTCATTGCGTTGACGAGATACATACGGTTGTATCAGCGTTCCATGCAGCAACCGAGTTAGATCCTCAGCTACACACCCGGTTTGCACTCCAAACCATCTCCTTCTTATACAAGAACCTAAGAGAGAGGATCAGCAAGAAGATACTCATGATGGGATCAGTTTTAGAGAGAGGCAAAGAGAAGTCTCAAGAAGACTCAATCTTCCCCCAGCATTGCCTTCTTCAGCAGCTAAAACGTAAGAACCATCAGGTTTGGAGACCGCAACGAGGTTTGCCTGAGAAATCAGTCTCGGTTCTACGGACTTGGATGTTCCAAAACTTTCTTCACCCGTAAGAATCCTTTAAACTCTTTCTTAAGTCTATACTTTGTGATGACATTTGTTAGCTAAGCAAATGATATTGTTGTATAGTTACCCGAAAGATTCAGAGAAACATCTTCTTGCTATACGAAGTGGATTGACAAGAAGTCAGGTATGTTTCGACTTCAGAACGTATGTTTGTTACTTAGACCTAAGCAGCAAGTGTTATAAGTGTGTCTTGTTTGTTGTGTGTGATGAAAGGTATCAAACTGGTTTATAAATGCGCGGGTAAGACTGTGGAAGCCGATGATAGAAGATATGTACGCAGAAATGAACAAGAGGAAGATGATTAACACTCACCTTCAAGGCGGTAATGGAGGAAGTGTTATTAGAGTGCCAAAGTCTGTAATGATGAGCCAAGAAAGGTGCAAAATAAGAGAATGA
CDS Sequence
- >Bo1g008560
ATGGACAACATCAACACTTATAGTTCTCTGGACAATGTTATGACTAACCAAAACCATCTTCTCATGGATTTGATACCTTCAAGAGAAGATTCCACATCATTTCCAACAATGCTTCCATGGAATTCCATCAGACAAGATCCTCTACAAATGGGTGTCTTTGATATCTTCAACTCTTTTCTCACTAACAAGTACTTATCATCTACTTCAAGATCTACAAATGTTCATGAAACCAGCTTTGAGGCCATGGCTCCTCCTCCTTCACTTCATCCTATGGATCATCTAAGACCATATGATGATCCCTCAAACAACATGTGGAGTCTTGGTGAAAATAGTGAGTTTCATGCATATCCATTCATAGAAGGTGTTGTTGGTCCTAGTGAACCAATAATATCTACATTCGGTGAAGAATTCCCAAGAAACGAGTTCTCGTTAAGTCTTGCCACTGATGTTTCTGATGAGTGCTCGGAGATAAGTCTTTGTGCTGCTACTAAATCTACTAGAATAACCTCAGAGCAAGCTTCTTCCAGCAGCAAAGACATGTCAAACGTCTCTCAAGTCATATTTTGCTCCAAGTACCTTCACTCTGTTCAAGAAATACTATCTCATTTCGCCACATACTCCCTCAAAGGCTTAGAGACTAATCCTCAGTGCTACTTTTCATCTCGAGGAACCGAGTCAGAGGGTACAAACTCAGCCTTTACTTCATGTTATGAGAATCTAAACGAGTTTCTTGATGGCGGTTCGCAAAGACAAGCATTAGAAGCAAAGAAAACCCATCTCTTGGATCTTCTTCAAATGGTTGATGACCGATATAGTCATTGCGTTGACGAGATACATACGGTTGTATCAGCGTTCCATGCAGCAACCGAGTTAGATCCTCAGCTACACACCCGGTTTGCACTCCAAACCATCTCCTTCTTATACAAGAACCTAAGAGAGAGGATCAGCAAGAAGATACTCATGATGGGATCAGTTTTAGAGAGAGGCAAAGAGAAGTCTCAAGAAGACTCAATCTTCCCCCAGCATTGCCTTCTTCAGCAGCTAAAACGTAAGAACCATCAGGTTTGGAGACCGCAACGAGGTTTGCCTGAGAAATCAGTCTCGGTTCTACGGACTTGGATGTTCCAAAACTTTCTTCACCCTTACCCGAAAGATTCAGAGAAACATCTTCTTGCTATACGAAGTGGATTGACAAGAAGTCAGGTATCAAACTGGTTTATAAATGCGCGGGTAAGACTGTGGAAGCCGATGATAGAAGATATGTACGCAGAAATGAACAAGAGGAAGATGATTAACACTCACCTTCAAGGCGGTAATGGAGGAAGTGTTATTAGAGTGCCAAAGTCTGTAATGATGAGCCAAGAAAGGTGCAAAATAAGAGAATGA
Protein Sequence
- >Bo1g008560
MDNINTYSSLDNVMTNQNHLLMDLIPSREDSTSFPTMLPWNSIRQDPLQMGVFDIFNSFLTNKYLSSTSRSTNVHETSFEAMAPPPSLHPMDHLRPYDDPSNNMWSLGENSEFHAYPFIEGVVGPSEPIISTFGEEFPRNEFSLSLATDVSDECSEISLCAATKSTRITSEQASSSSKDMSNVSQVIFCSKYLHSVQEILSHFATYSLKGLETNPQCYFSSRGTESEGTNSAFTSCYENLNEFLDGGSQRQALEAKKTHLLDLLQMVDDRYSHCVDEIHTVVSAFHAATELDPQLHTRFALQTISFLYKNLRERISKKILMMGSVLERGKEKSQEDSIFPQHCLLQQLKRKNHQVWRPQRGLPEKSVSVLRTWMFQNFLHPYPKDSEKHLLAIRSGLTRSQVSNWFINARVRLWKPMIEDMYAEMNKRKMINTHLQGGNGGSVIRVPKSVMMSQERCKIRE