Information report for Bo1g007520
Gene Details
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Functional Annotation
- MADS-box transcription factor. Expressed in leaf, root and stem, with higher RNA accumulation in guard cells and trichomes.
Homologous
- Arabidopsis thaliana: AT3G57230.1
- Brassica napus: BnaC01G0045300ZS, GSBRNA2T00130794001, GSBRNA2T00121299001, BnaA03G0543200ZS, GSBRNA2T00092702001, BnaC07G0519400ZS, GSBRNA2T00099980001
- Brassica rapa: XP_009115272.1, XP_009138271.1, Bra017638
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: A0A0D3A226
- RefSeq: XP_013620707.1
- AlphaFoldDB: A0A0D3A226
- KEGG: boe:106327178
- OMA: TSEVEFW
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- OrthoDB: A0A0D3A226
- SMR: A0A0D3A226
- CDD: cd00265
- eggNOG: KOG0014
- STRING: 109376.A0A0D3A226
- HOGENOM: CLU_053053_2_0_1
Sequences
gDNA Sequence
- >Bo1g007520
TGGGAAGGGGTAAGATCGCGATCAAGAGGATTGATAACGCGACGAGTCGTCAGGTGACTTTCTCCAAGCGAAGGAACGGACTCTTGAAGAAAGCCAAGGAGCTTGCGATTCTCTGCGACGCTGAGGTTGGTGTCATCATCTTCTCCAGCACCGGCAGGCTCTACGAGTTCTCCAGCTCCAGGTATACCCTTTTCCATTTGCTTCCTTTGTTCTATGTTTGGTTGACTTTTTGTGGTATTGGTCCAGTGTGATTGATTAGAGAATCTAACCCATGATCCATCCGGTTTTGTTGACCACAAACCAATTCCAAATTGTTTCCATTCTATTTCTAGTTATTTTTGTTGTTATCTGGAAAACTCGTTTGATTGTGTGCACATCCCTGAAGATGACATAAGCAGCATTATTTTACCTTGATTCATATTATATGACAGTGAAACCTCAAACCTGAAAATTGGTATTATGACTTGGTTGGTTTGACTATCTATATGAATTGGCTGGAAAAAAAAAATCACAAAGCCAATACAGTTTGCTTGAGATTCATAGATTACAGGGTTTGTAACGGAATTATGAGGTTTATGGGTTTGTATGTCATGTGTGTATGCTATTGAGATGCAGGACATGACAAAAGTCAAATGGATTTAGGATTGGATATGACTAGGATGATGTAGATTTGTGGTTGATGCGTAGATAGGAAGGGACTTGTAGTGTTTCTTAAAAATACTAAATTTGGTAAAAACTGTTTTAAGAATGGAATAAAAAGTGGTTAGTGGTTAGTATGGGTCAAGAAACTCTTAACTCTGTCGCTAATCACCACATCTTTTTTTTTTATGTCTTCTTGGCTAGAAAGAATAGTCTATTGAGCTATTTACTTTTTTTTATTAGCAACTTGTTGTTGGTGGGGTTGGATGTACCTATAATGATTTTAATGTTGAATAAGTGGGGGAATCATTTCTGCTTTCGTTCTCATCCATACTCAACTTTTCCTATTTAATTCATCCCAATCGGGAAATAAAAGTATAAAACCACCCCATTTTTAATACTCTACATTCAAGTTGGTCATTGTTTATTTGTGTATAAAGAGTATATTCTTCTTCTTTTGTTGGGAAAAATTAGTCCCTTCTGATTTTCTACATTAGGAGGTCTTCCTTAGAGTAAAACTGAAGTTAAACTATAAAGTAAAAATATCGTCAGAAATAAATGTAGCTTCAAAAGAGTTCATCCATGAGATTTAGTCCATTAGATATCAGAATAAATGGTGTTTAACCATCTATGTCTCTCTAATTCATAACTTGCAAAGCTGATCACAATAGTCCATTAGATATCAGAATCAATAGTATCTGCAGATATACAACTTACCTTCTTTTTGTTTGGCAGCATGAAATCGATAATAGATAGATACAGCGAGGCCAAATGTGAAACTAGTTCGGAAATCAACCCAGCTTTAGAAATCAAGGTACTTGGTGCTTTTAGTCTATTACACAGCTTCACTATCATGTTTCAAATTTTGACACCTCTCAAGCTGATCCTGAGTTCATATTGGAAGTAGGTTTTGCTATATCACACACACACATACAAGTTATGACACCTGACAATCATATTACATTCACTATACTGCATTTTTCATTTTTTAAAGAATCCATTCTAGACTTGTTAGCACTTAGCATATCAATCTCAAAACCAAAAACAAAAGTTTATTTCCTCAGATTCAATCACCTCTGAAAATAGTTCTGATGTGTTATAGTTTTGGCAAAAGGAGGCCGCGATTCTAAAGCGACAGTTACACAACTTGCAAGAAAACCACCGGTATGTGTTTTGCATCCTCGTCAAACACTCTCGATATTAACAAACTAGAACAGGGAACGATGTACTAAAATGTCTGCAGAAAAGCAAAACTATCCTAGCATTTGCATTTTTTTTATAATGGGAACGTCGATGTAAAAACAAAATTCCAAAATGATTTACCACCTCTTAAGGACTTTACCATGATCCTGGATATCTTCTCCAAAATCACCACTGTATATAGTTACTCTGGAAAAAGTTTGCATATTCACAAGTGATGGAGGAAGAGCTTGTACTTGGCAGGCAAATGATGGGGGAAGAGCTCTCTGGACTAAGTGTGGAAGATTTACAGAAACTGGAGAATCAGCTTGAACTGAGCCTTCATGATGTACGAATGAAAAAGGTATTGATATTGTGTGACATATATGTCAGATAAATTTTTTTTCATCTAACTATTGGAAAAAAGACGTAAAAACTGTACTCTACTCTCACACTTGTAGGATCAAATGTTACTAGAAGAAATACAAGAGCTTAACCGCGAGGTGGGAATCTGATTACTCGAATATAGAAATTATTAGACATTTCCACAGTGCTAATTCTTATATTTTTGGTAGCAGGGGAATCTCTTACACCAAGAGAACTTAGACCTCCACGAGAAATTAAACCTAATGCGACAACAGAATATGGAGTTACATAAGAAGGTAATCTTTGTTTTTTAGGAGGCAAAATCGCCTTTGAAAAAAAGCTACATCATGTGTTTTCTTATGAATTGTGAGGATAATGTGATATGGCCAAGACTTGCAGGTTTCAGAGGTTGAGGGTGTGAAAAGCTCAGAGAAAATTTCTCTTCTCACAAATGGTCTAGGCATGAGAGATAACTCGAGCGAACATGTTCATCTTCAGCTCAGCCAACCGCTGCAGCATGATGAGACTCCTTCAAAAGCTATCCAACTAAGCTATTTCTCCTTCATTTCATAA
CDS Sequence
- >Bo1g007520
ATGGGAAGGGGTAAGATCGCGATCAAGAGGATTGATAACGCGACGAGTCGTCAGGTGACTTTCTCCAAGCGAAGGAACGGACTCTTGAAGAAAGCCAAGGAGCTTGCGATTCTCTGCGACGCTGAGGTTGGTGTCATCATCTTCTCCAGCACCGGCAGGCTCTACGAGTTCTCCAGCTCCAGCATGAAATCGATAATAGATAGATACAGCGAGGCCAAATGTGAAACTAGTTCGGAAATCAACCCAGCTTTAGAAATCAAGTTTTGGCAAAAGGAGGCCGCGATTCTAAAGCGACAGTTACACAACTTGCAAGAAAACCACCGGCAAATGATGGGGGAAGAGCTCTCTGGACTAAGTGTGGAAGATTTACAGAAACTGGAGAATCAGCTTGAACTGAGCCTTCATGATGTACGAATGAAAAAGGATCAAATGTTACTAGAAGAAATACAAGAGCTTAACCGCGAGGGGAATCTCTTACACCAAGAGAACTTAGACCTCCACGAGAAATTAAACCTAATGCGACAACAGAATATGGAGTTACATAAGAAGGTTTCAGAGGTTGAGGGTGTGAAAAGCTCAGAGAAAATTTCTCTTCTCACAAATGGTCTAGGCATGAGAGATAACTCGAGCGAACATGTTCATCTTCAGCTCAGCCAACCGCTGCAGCATGATGAGACTCCTTCAAAAGCTATCCAACTAAGCTATTTCTCCTTCATTTCATAA
Protein Sequence
- >Bo1g007520
MGRGKIAIKRIDNATSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYEFSSSSMKSIIDRYSEAKCETSSEINPALEIKFWQKEAAILKRQLHNLQENHRQMMGEELSGLSVEDLQKLENQLELSLHDVRMKKDQMLLEEIQELNREGNLLHQENLDLHEKLNLMRQQNMELHKKVSEVEGVKSSEKISLLTNGLGMRDNSSEHVHLQLSQPLQHDETPSKAIQLSYFSFIS