Information report for Bo1g007200
Gene Details
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Functional Annotation
- Encodes a transcription factor CIB1 (cryptochrome-interacting basic-helix-loop-helix). CIB1 interacts with CRY2 (cryptochrome 2) in a blue light-specific manner in yeast and Arabidopsis cells, and it acts together with additional CIB1-related proteins to promote CRY2-dependent floral initiation. CIB1 positively regulates FT expression.
Homologous
- Arabidopsis thaliana: AT4G34530.1
- Brassica napus: GSBRNA2T00130837001, BnaC01G0042600ZS, BnaA01G0037200ZS, GSBRNA2T00121331001
- Brassica rapa: XP_009111901.1, Bra011540
- Raphanus raphanistrum: RrC3826_p3
Gene Resources
- Pfam: PF00010
- UniProt: A0A0D3A1Z4
- RefSeq: XP_013619687.1
- AlphaFoldDB: A0A0D3A1Z4
- KEGG: boe:106326210
- OMA: APSMWDS
- InterPro: IPR011598 , IPR024097 , IPR036638
- PANTHER: PTHR12565 , PTHR12565:SF467
- SUPFAM: SSF47459
- PROSITE: PS50888
- Gene3D: 4.10.280.10
- OrthoDB: A0A0D3A1Z4
- SMR: A0A0D3A1Z4
- CDD: cd18919
- eggNOG: ENOG502QT6X
- STRING: 109376.A0A0D3A1Z4
- HOGENOM: CLU_025018_1_0_1
Sequences
gDNA Sequence
- >Bo1g007200
CAAACTCCTAGATTACTATAAAGATTCTGCACATCAGAGTCCCACATAGTAGCAGATTGACCATTCTGTAACATAATCAAAACATATAGATTATTAGTAAACCAAAAGTTATATGATAAGCTTCACAGTGGAAGAGAAATGAAAACATAACCTACGTTGAAACATGACAGTGGATCAGAACTAGTAACCACTTGCTGCATTGGATTGAAATGAACATAACCGGAATTAACCATATCATGAGGGTAACCGGAATTCACCATCATATGAGGTGGCATCACAGTGTTTGGTAAGTTCATCATTGGAGCTGAGACAACCTGGATTCAATTTATATTAGCTCATCTAATAATTCTATAAATTAAAGCTTTTACATACAAACAAATTTAAAAAAAAAGACTAACCTCTTTGGCAAAAATGTCATCGATGTTGAAATCCACCCTTGGACTAACAGTTGCTAGCTTCATTGATAAGAACTGATCCAAACATGAACCATATATTAGGTTACAAATTATCAAATAATATTTCTAGTCTTACAAGATATATAGGAAATGAATTGTGAACCTCGACTTGTCTCTGAAGAGACTGAACATAGTTAATGATCTCATCAAGCATCCCTGCTTTGCCTGTAATCTTTTCGCATCCAGGAACCAAATCTTGTAGAAACTTCATTCTCTCACTGATCTTTTCTCTTCTAGCCTTCACAATTGAACAATAAAATTAGTCTTTAAATATTTTCAAAATATTAAGCTACTAAATGAAACTAATTAATAAAGTCTCTCTCTCTCACTCGTTCTGCAATGCTGTGGCTATCAGTGGCTTGGCCTCTCCGTGCACGAACATGGATATAATCCGTCCTCTGCGAGTCTTTAGTCACTTTCGATGAATCGTTAGAACAACTGTTCTGTTCTTTCATCTTCATGATGCTTCTAGTGCTCTGCTCTGTTACTTTCGACTTCTCTTCTTCTTCTTCTTCTTCAACTGCTACTTCTCTGTCCATCATCATCATCATCTTTTTCTTCTCATTACAAACCTAAAAGCCCATTAACAGACAAAGTGAATCTCAAAGTAAGATCTGTGTTTTTATTCAGAGTTTTAGTTTCTTTAAGCAACATTGCGAACCTTAGTCTCTGTATCGACGCAACCAAACTTCCTTTTCTTGGAATTTTCAGACTCAGTTGTAATATTTCCTGGAGAAACTGAGATTCTCGCATCACCGTGCAACTCCCCGTAAATCTCCGGAAGATCCAAACCGGCCGACGGTAGAAAGCTGTCAACCTCGCCGACGTTCATCTTGGAAGAATTGGGGAAGAAGCAAGGGAGAGTGGGTTCGAAGCCGGGATGGTGGTACTGGTGGTAGTTTAGTTGAACCCTTTGGCGCTCTAAGACAGACATGTCGTCACAGTTGAGGAAAAGCTCAGCTTCTGTAGCTTCTCCTCCGTTCATCATCATCGTCATCATCAT
CDS Sequence
- >Bo1g007200
ATGATGATGACGATGATGATGAACGGAGGAGAAGCTACAGAAGCTGAGCTTTTCCTCAACTGTGACGACATGTCTGTCTTAGAGCGCCAAAGGGTTCAACTAAACTACCACCAGTACCACCATCCCGGCTTCGAACCCACTCTCCCTTGCTTCTTCCCCAATTCTTCCAAGATGAACGTCGGCGAGGTTGACAGCTTTCTACCGTCGGCCGGTTTGGATCTTCCGGAGATTTACGGGGAGTTGCACGGTGATGCGAGAATCTCAGTTTCTCCAGGAAATATTACAACTGAGTCTGAAAATTCCAAGAAAAGGAAGTTTGGTTGCGTCGATACAGAGACTAAGGTTTGTAATGAGAAGAAAAAGATGATGATGATGATGGACAGAGAAGTAGCAGTTGAAGAAGAAGAAGAAGAAGAGAAGTCGAAAGTAACAGAGCAGAGCACTAGAAGCATCATGAAGATGAAAGAACAGAACAGTTGTTCTAACGATTCATCGAAAGTGACTAAAGACTCGCAGAGGACGGATTATATCCATGTTCGTGCACGGAGAGGCCAAGCCACTGATAGCCACAGCATTGCAGAACGAGCTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTTCTACAAGATTTGGTTCCTGGATGCGAAAAGATTACAGGCAAAGCAGGGATGCTTGATGAGATCATTAACTATGTTCAGTCTCTTCAGAGACAAGTCGAGTTCTTATCAATGAAGCTAGCAACTGTTAGTCCAAGGGTGGATTTCAACATCGATGACATTTTTGCCAAAGAGGTTGTCTCAGCTCCAATGATGAACTTACCAAACACTGTGATGCCACCTCATATGATGGTGAATTCCGGTTACCCTCATGATATGGTTAATTCCGGTTATGTTCATTTCAATCCAATGCAGCAAGTGGTTACTAGTTCTGATCCACTGTCATGTTTCAACAATGGTCAATCTGCTACTATGTGGGACTCTGATGTGCAGAATCTTTATAGTAATCTAGGAGTTTGA
Protein Sequence
- >Bo1g007200
MMMTMMMNGGEATEAELFLNCDDMSVLERQRVQLNYHQYHHPGFEPTLPCFFPNSSKMNVGEVDSFLPSAGLDLPEIYGELHGDARISVSPGNITTESENSKKRKFGCVDTETKVCNEKKKMMMMMDREVAVEEEEEEEKSKVTEQSTRSIMKMKEQNSCSNDSSKVTKDSQRTDYIHVRARRGQATDSHSIAERARREKISERMKFLQDLVPGCEKITGKAGMLDEIINYVQSLQRQVEFLSMKLATVSPRVDFNIDDIFAKEVVSAPMMNLPNTVMPPHMMVNSGYPHDMVNSGYVHFNPMQQVVTSSDPLSCFNNGQSATMWDSDVQNLYSNLGV