Information report for Bo01186s020
Gene Details
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Functional Annotation
- encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC.
Homologous
- Brassica napus: BnaC09G0300400ZS, BnaC03G0303300ZS, BnaA03G0255400ZS, BnaA09G0256100ZS
- Brassica rapa: Bra035286, Bra000719
- Gossypium hirsutum: Gohir.A11G275000, Gohir.A13G177400
- Populus trichocarpa: POPTR_013G004500v3
- Prunus avium: Pav_sc0001938.1_g060.1.mk
- Prunus persica: PRUPE_6G306600
- Vitis vinifera: VIT_14s0060g00580
Gene Resources
- Pfam: PF14826 PF00557 PF08512 PF08644
- UniProt: A0A0D2ZU49
- AlphaFoldDB: A0A0D2ZU49
- OMA: MECESKK
- InterPro: IPR000994 , IPR011993 , IPR013719 , IPR013953 , IPR029148 , IPR029149 , IPR033825 , IPR036005 , IPR040258
- PANTHER: PTHR13980 , PTHR13980:SF18
- SUPFAM: SSF55920
- Gene3D: 2.30.29.150 , 2.30.29.210 , 2.30.29.30 , 3.40.350.10 , 3.90.230.10
- CDD: cd01091
- eggNOG: KOG1189
- STRING: 109376.A0A0D2ZU49
- HOGENOM: CLU_004627_1_1_1
Sequences
gDNA Sequence
- >Bo01186s020
TAGTATTTCTTCTTTGCTAAATCATAGTTGTGAACGATGATGTAAATTATAATAAAAGAAAAATGATTATTATAAAAAAACAGTTGTAACCTAAACATACTCAAGTCCATTATTTTTTCTAGGAATCGAACTGATAATCGTCTCTTACATTTCTCTTCTTCGGTAGTCCTCTTCTTCTTCTTCTTGGTCCTCTCTGACTCGCTCTCAGAATCCTCATCCTCCGACTCAGACTCATCCTCTGCATCTGGTGGCTCATATCCTTGGTCTGACTCCTCAGGTTCTGAATCGCTTCTTTCCAAGTTCAAAAACTCCCAACCTCCATCGTCTATAAAGCCCTGAGGATCATCCGTGATTCTCTTGAGGATCGGTCTCCACATGAGATTCGCTTTGCTCTCGTAGTACTTAATATCGATAGCGTCAAGCCACTTCTTTATCCCTTCTAGATAACTTGTGTCGATTGCGTTGATCTTGAGGACATCTTTCTTGAAGTCCTTGAAGACTATGGCCATGTCAAAGTACTTCTGCCCAAACACGACTCTCTCGAGATTCACAATCTCAACCTCACTCAGACTAACCACCAAAACCGGGGTTTCGGTGAGCATAACCAAACAGCTTGATGTCGGGACGATGAAAACACGTGCCTTGTCCGTGACGCCAGAGAAACCAAGCTCTCTCAACGGTTGTTCAAACTCAAGAGCACTGACACGTGTTGCGAAATGATTGAAATCCACGTTGATCTTGTTTTTCCTATCGCGCTCCCTCTGCTCTTCAAGAATCTCGCCTGGGTCATAGGCCGATGGTGATGATCTCCTTCCACCACCGCCTAGAGACTGCACAGCATCCATCACCTCCACGTAAAACTGGACGTCCTTTGTCTTCTTGTTTCCCAGCATGATGTGGTTGTGCAAGTGGAAATGCAGTGTGGTGAGCATCTCCTTCTCAGCCGGCTGGAGAAACGCATGTTTTACGTTTGCAAACAGGACATCTACCCTCTCATTAGGCCTAGTCGTTGAGTATCTGAAACCATTGGCGTGAGCTTCGAGTGCCCCAGGAACCCTCTTCCGACCACTAAACTGCGGGCGGATCCACAGACCAGACAGCCTGAGGGGTCTGAACTTGTTTCCTGCAAGCTGAAGCTTCTCCTGGTTCACCAGCGTCCCCCTTTCAATTCTTTCGGACTCTCGGGCATTGACTTGCCGTCTAAGGGTCTTAATCGCCTGAACCACTTCACTGCTACGCTTTGAATCCTTGCACCGGAACGTAACCTCTTTGAGGTATATAGCACCCTGGTTCTTCAGAGTTATGACACTGAAAATTATACGGATGTAGTTGTTCCGGGTGCTATCCTGCTGGTTCGACACATGGAATGGAACCATGCTACCATAGATGGGTAACAATACAGCCTCCTTCTTCTGATCAACCTGGATCATCATCATCAAATCACGAGGTTGAGGCACATCGTTAACGTTCTTGTAGGCAACCGAATCAGTTGAAGTCTTTGCAGTAGAACCGGAGCTGCCGTCACCAGCAAGCCTTCTGACAGTTTCTTCATTCTTCCGGCGTGCAAGCTCTGCCTGGTGCTGATTCCGCATCCGCAGCTCATCTTTCGAGACCACATGATTATTATTATTATTATTATTATTATATGATCTAAGAGATGTCTTGTTGATGAAGTAGCTCTCAGGACCGCTGGTCCTCCTTGCCTTCTTCCTGCAGGGCTTCTCTTCTTTGTCGTAACTCACATCTGTAACAAGTTTGGAGCACTTGCCCGTCAAAATCTCAGGATCCTCATCTTTAACAATAACAGTGTCGGCCAGAAAAAGCGAGAATTTCTTCTTCTTGCTCTCACATTCCATGTTCTGGAAACCAAGTGACACATTAAACGCCATCTGTGATCTCAACACTTTATCATTCCTTGCATTGATGTTTAATCCAGACTCTCGGAACTCAAGACCGATACCAGTCCCAGCAGATTTAGTCAGCTTGTCAACCAACTCAGGGGCTTCCTTTTCGACCACTGAAAGTGCAGCTTGATAGACACTGCTTAACTTTCTTCCTCGCCTCATAGCATTAATAGCAGCCTCATGTGCCTTGAGAAGAACTTCATAAGCCTTGCTCTGGAGATTAGTTGCATCTATTAGGTATGTCCTGGCCACGTTAGAGCAATAACTATTGTACCGAGCACCAACAGCACATATAATGATGCTCCCTAGATCGTAAGCGAGCAGATCATCATTGCTTACAGCACTAGGCTTGAGATCAAACTTGCCTCCACTTTGAAATATTGGAGGGTAGCATATGTCAACACACTCTGGCTTCAGCTTCACACCGGCTTTCGTCGGATCAAGTATCGCTTTCTCCGTGAGACGCATCAGCAGAGAGTGGGTGACATCTCTCTCCTCATCAATGACCTTCTCAAGTTTTGTAACAACAACGTTTTTCATCACGCTGGAGGCAAGATACGCTGCTTTCTTCACATTAATAATCTCTGTTCCGTCTTTAGCAGCAAAGAGATCAGACAACCCCGCAGTGATATCAACAAACTGGAACTGGAACTTAGCATTCGTTAGCCTTTCAGTCCACTTCTCGAGAAGCTTACCTTCAGGAGCTTCACGAGCAATGTGTCCCACAACTTGGGACTCCTTTCCATCACGGATGGCACGGAGTACAGCATCCATCGGCCCATTTCCATCATCACCTTTAGCCTTTGCATGCATGACAACATCGATCCCCAACTCATCATGTGCAGGTTGTTTCACAACTTCAAGCAGAGTTGCTATTTTCTTGCTACACAAGAAATGGATCTGCTTTGAGCTGAAGACCATTATAGTGTCAGAAAACTCATACCCAAGAAGCCAAATATGCAAAGCAGAGGACTTCAGGTAGCGAAGATCATTAGTAGCAGGATGTGTAGCTACGGCAAGAGCGTCCGCAGATCCCCATATGTCTGCAATGTGCTCATTCCAGTGTGCATACAAGGCTCTTGTACGTGAGATGAACTTCATGACATCAATGACGTAGGTATCACCGTTCCTTGAGTCTGCCAT
CDS Sequence
- >Bo01186s020
ATGGCAGACTCAAGGAACGGTGATACCTACGTCATTGATGTCATGAAGTTCATCTCACGTACAAGAGCCTTGTATGCACACTGGAATGAGCACATTGCAGACATATGGGGATCTGCGGACGCTCTTGCCGTAGCTACACATCCTGCTACTAATGATCTTCGCTACCTGAAGTCCTCTGCTTTGCATATTTGGCTTCTTGGGTATGAGTTTTCTGACACTATAATGGTCTTCAGCTCAAAGCAGATCCATTTCTTGTGTAGCAAGAAAATAGCAACTCTGCTTGAAGTTGTGAAACAACCTGCACATGATGAGTTGGGGATCGATGTTGTCATGCATGCAAAGGCTAAAGGTGATGATGGAAATGGGCCGATGGATGCTGTACTCCGTGCCATCCGTGATGGAAAGGAGTCCCAAGTTGTGGGACACATTGCTCGTGAAGCTCCTGAAGGTAAGCTTCTCGAGAAGTGGACTGAAAGGCTAACGAATGCTAAGTTCCAGTTCCAGTTTGTTGATATCACTGCGGGGTTGTCTGATCTCTTTGCTGCTAAAGACGGAACAGAGATTATTAATGTGAAGAAAGCAGCGTATCTTGCCTCCAGCGTGATGAAAAACGTTGTTGTTACAAAACTTGAGAAGGTCATTGATGAGGAGAGAGATGTCACCCACTCTCTGCTGATGCGTCTCACGGAGAAAGCGATACTTGATCCGACGAAAGCCGGTGTGAAGCTGAAGCCAGAGTGTGTTGACATATGCTACCCTCCAATATTTCAAAGTGGAGGCAAGTTTGATCTCAAGCCTAGTGCTGTAAGCAATGATGATCTGCTCGCTTACGATCTAGGGAGCATCATTATATGTGCTGTTGGTGCTCGGTACAATAGTTATTGCTCTAACGTGGCCAGGACATACCTAATAGATGCAACTAATCTCCAGAGCAAGGCTTATGAAGTTCTTCTCAAGGCACATGAGGCTGCTATTAATGCTATGAGGCGAGGAAGAAAGTTAAGCAGTGTCTATCAAGCTGCACTTTCAGTGGTCGAAAAGGAAGCCCCTGAGTTGGTTGACAAGCTGACTAAATCTGCTGGGACTGGTATCGGTCTTGAGTTCCGAGAGTCTGGATTAAACATCAATGCAAGGAATGATAAAGTGTTGAGATCACAGATGGCGTTTAATGTGTCACTTGGTTTCCAGAACATGGAATGTGAGAGCAAGAAGAAGAAATTCTCGCTTTTTCTGGCCGACACTGTTATTGTTAAAGATGAGGATCCTGAGATTTTGACGGGCAAGTGCTCCAAACTTGTTACAGATGTGAGTTACGACAAAGAAGAGAAGCCCTGCAGGAAGAAGGCAAGGAGGACCAGCGGTCCTGAGAGCTACTTCATCAACAAGACATCTCTTAGATCATATAATAATAATAATAATAATAATAATCATGTGGTCTCGAAAGATGAGCTGCGGATGCGGAATCAGCACCAGGCAGAGCTTGCACGCCGGAAGAATGAAGAAACTGTCAGAAGGCTTGCTGGTGACGGCAGCTCCGGTTCTACTGCAAAGACTTCAACTGATTCGGTTGCCTACAAGAACGTTAACGATGTGCCTCAACCTCGTGATTTGATGATGATGATCCAGGTTGATCAGAAGAAGGAGGCTGTATTGTTACCCATCTATGGTAGCATGGTTCCATTCCATGTGTCGAACCAGCAGGATAGCACCCGGAACAACTACATCCGTATAATTTTCAGTGTCATAACTCTGAAGAACCAGGGTGCTATATACCTCAAAGAGGTTACGTTCCGGTGCAAGGATTCAAAGCGTAGCAGTGAAGTGGTTCAGGCGATTAAGACCCTTAGACGGCAAGTCAATGCCCGAGAGTCCGAAAGAATTGAAAGGGGGACGCTGGTGAACCAGGAGAAGCTTCAGCTTGCAGGAAACAAGTTCAGACCCCTCAGGCTGTCTGGTCTGTGGATCCGCCCGCAGTTTAGTGGTCGGAAGAGGGTTCCTGGGGCACTCGAAGCTCACGCCAATGGTTTCAGATACTCAACGACTAGGCCTAATGAGAGGGTAGATGTCCTGTTTGCAAACGTAAAACATGCGTTTCTCCAGCCGGCTGAGAAGGAGATGCTCACCACACTGCATTTCCACTTGCACAACCACATCATGCTGGGAAACAAGAAGACAAAGGACGTCCAGTTTTACGTGGAGGTGATGGATGCTGTGCAGTCTCTAGGCGGTGGTGGAAGGAGATCATCACCATCGGCCTATGACCCAGGCGAGATTCTTGAAGAGCAGAGGGAGCGCGATAGGAAAAACAAGATCAACGTGGATTTCAATCATTTCGCAACACGTGTCAGTGCTCTTGAGTTTGAACAACCGTTGAGAGAGCTTGGTTTCTCTGGCGTCACGGACAAGGCACGTGTTTTCATCGTCCCGACATCAAGCTGTTTGGTTATGCTCACCGAAACCCCGGTTTTGGTGGTTAGTCTGAGTGAGGTTGAGATTGTGAATCTCGAGAGAGTCGTGTTTGGGCAGAAGTACTTTGACATGGCCATAGTCTTCAAGGACTTCAAGAAAGATGTCCTCAAGATCAACGCAATCGACACAAGTTATCTAGAAGGGATAAAGAAGTGGCTTGACGCTATCGATATTAAGTACTACGAGAGCAAAGCGAATCTCATGTGGAGACCGATCCTCAAGAGAATCACGGATGATCCTCAGGGCTTTATAGACGATGGAGGTTGGGAGTTTTTGAACTTGGAAAGAAGCGATTCAGAACCTGAGGAGTCAGACCAAGGATATGAGCCACCAGATGCAGAGGATGAGTCTGAGTCGGAGGATGAGGATTCTGAGAGCGAGTCAGAGAGGACCAAGAAGAAGAAGAAGAGGACTACCGAAGAAGAGAAATCAAAGAAGAAATACTAG
Protein Sequence
- >Bo01186s020
MADSRNGDTYVIDVMKFISRTRALYAHWNEHIADIWGSADALAVATHPATNDLRYLKSSALHIWLLGYEFSDTIMVFSSKQIHFLCSKKIATLLEVVKQPAHDELGIDVVMHAKAKGDDGNGPMDAVLRAIRDGKESQVVGHIAREAPEGKLLEKWTERLTNAKFQFQFVDITAGLSDLFAAKDGTEIINVKKAAYLASSVMKNVVVTKLEKVIDEERDVTHSLLMRLTEKAILDPTKAGVKLKPECVDICYPPIFQSGGKFDLKPSAVSNDDLLAYDLGSIIICAVGARYNSYCSNVARTYLIDATNLQSKAYEVLLKAHEAAINAMRRGRKLSSVYQAALSVVEKEAPELVDKLTKSAGTGIGLEFRESGLNINARNDKVLRSQMAFNVSLGFQNMECESKKKKFSLFLADTVIVKDEDPEILTGKCSKLVTDVSYDKEEKPCRKKARRTSGPESYFINKTSLRSYNNNNNNNNHVVSKDELRMRNQHQAELARRKNEETVRRLAGDGSSGSTAKTSTDSVAYKNVNDVPQPRDLMMMIQVDQKKEAVLLPIYGSMVPFHVSNQQDSTRNNYIRIIFSVITLKNQGAIYLKEVTFRCKDSKRSSEVVQAIKTLRRQVNARESERIERGTLVNQEKLQLAGNKFRPLRLSGLWIRPQFSGRKRVPGALEAHANGFRYSTTRPNERVDVLFANVKHAFLQPAEKEMLTTLHFHLHNHIMLGNKKTKDVQFYVEVMDAVQSLGGGGRRSSPSAYDPGEILEEQRERDRKNKINVDFNHFATRVSALEFEQPLRELGFSGVTDKARVFIVPTSSCLVMLTETPVLVVSLSEVEIVNLERVVFGQKYFDMAIVFKDFKKDVLKINAIDTSYLEGIKKWLDAIDIKYYESKANLMWRPILKRITDDPQGFIDDGGWEFLNLERSDSEPEESDQGYEPPDAEDESESEDEDSESESERTKKKKKRTTEEEKSKKKY