Information report for Bo00285s440
Gene Details
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Functional Annotation
- Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.
Homologous
- Arabidopsis thaliana: AT3G26744.4
- Brassica napus: GSBRNA2T00040443001, BnaC02G0455500ZS, GSBRNA2T00092171001, BnaA02G0338800ZS, BnaA06G0388000ZS, BnaC07G0299100ZS
- Brassica rapa: XP_009129484.1, Bra032947, XP_009152022.1, Bra025226
- Raphanus raphanistrum: RrC1984_p3
Gene Resources
- Pfam: PF00010
- UniProt: A0A0D2ZPF6
- RefSeq: XP_013613372.1 , XP_013613373.1 , XP_013613374.1
- AlphaFoldDB: A0A0D2ZPF6
- KEGG: boe:106319552
- OMA: MLEEDWY
- InterPro: IPR011598 , IPR036638 , IPR051358 , IPR054502
- PANTHER: PTHR31945 , PTHR31945:SF82
- SUPFAM: SSF47459
- PROSITE: PS50888
- Gene3D: 4.10.280.10
- OrthoDB: A0A0D2ZPF6
- SMR: A0A0D2ZPF6
- CDD: cd04873 , cd11443
- eggNOG: ENOG502QQ2A
- STRING: 109376.A0A0D2ZPF6
- HOGENOM: CLU_035660_5_0_1
Sequences
gDNA Sequence
- >Bo00285s440
CAGATCATACCAGCGTAGCCCGCTGTATCGAAAAGCACTGCTTTGATTTGATCAGGCAATATCTCCTGTCCTTCTTGGCATTGCTGATAATATACACACAAAAACAAAACATGTTAGTATTTAAAATCTTGTAAGAATCCAGATAACTGAAAGTAGATGATGTTTAATAATCTCACCTCAGCGCGGAAAACATCCAAGGCAAACCCATTGAAACAACTGATCACAGCTTGCTGAACATCCAATCCAAGATTATCCAAAGCTTTCATGGTATCCAGCAAAAGTCCAGGTCTACGACCACAGAACATGTGAATGTTCACCGCTCTTCCTTCCCTTAATCTAACCTCAACCTGTAGATAAAAAAACACAAGTGTGTCAATGTCTCAACCATAAAAAAAAACCCACCATGAAGTAAGTAAAAGCCTTACTCTAGCTTGCTGGCCTTTAGGGCTTGGCAAAGAAGAGGGACACAACTCTTCCTTGACGCGGCAAGAGAGAGTCTGCGGTGTAGGCGTTAATGGATGGAAGCTTGATGAAGTTGGAGGGAGAGATCCATTTGGAGTTGACTCGAGCTCGTTGTGAAGGTTATTGATCCTTTGTAAAAGCTCCTTGAGGTAATCAATTGCATCTCCAAGTATTGATGCTCTATCCATCTGCAATATTCATCCAAACCAAATCTTATCAACACAACAAAAGACAAAGAGTAAACAAAGAGAGAAGTAACTGTTTACTTTGCTGATCTTGGGGACAACTGATCTAAGCATATAGAGTCTATCATTAAGCTTCTTCCTCCTTCTCCTCTCAGCCATAAGATTCTTTGCTGGCATTCCTTTCTTCTTCCCTCTACCTCCTCCACCGTTCTGAACACTCTCAGCGGCTTTACCGCTCTCGTTCAGCTCATCAGACTCATAGTTCAACCCTGAAACCTCAACCCCAGTCTCATCCATCTCTCCATCATCGCTCAGCTTCCTCATCATCCCTGAGCTCTGACGCATGGCTGCACGTTTCTGGAACAAAGTAGGCTGTGCACCGGACGAAGCTAACACCTCCAAAGGCTTCAGAACCTTCGCTCTGCTCCCGACAAAACTCGCAGGACTCCCGAAACCCTCTAACTCCAACGGTGTGAATTCACCTCCACCTCCACCTCCACATAACGGCGTTGAGTTGTTGTTCCCCAACTGCATCAACGAACCGAACCCCATAGGAGCTTGGATATGTCCGAGAAAGCCAGAATCAGACCCGAACTCAAAGGCATTATTATCAAAAGGGTTTGCAACGTTGAGGAGACAAGACTTGTTGTTAGCAGCGGCCAAGAACGAAGGCTGATGAGACATGTCGAGGCCAAAAGCTTGAGAGGGAGAGCAAGAGGAAGAAGAATCAAGAAGAAGGTTATCGTTAGGATTAAAGGCGAAACCACCACCGAGGAATCTGAAATCTTGATGATGACTCTGTAACATGTGGAGATCTTGAGGTTGGTTACTGAACCAGTCACCACCTTCAAGCATAGGTTTGAAGTGAGCAGCACCGTCCTCCTCCTCATGAACCCGTTCTCCTCCTCCTCCTCCGCCGCCGCCGCCTAACCATACCGCGCCGCCGTTTCCGTCGAGAACCAT
CDS Sequence
- >Bo00285s440
ATGGTTCTCGACGGAAACGGCGGCGCGGTATGGTTAGGCGGCGGCGGCGGAGGAGGAGGAGGAGAACGGGTTCATGAGGAGGAGGACGGTGCTGCTCACTTCAAACCTATGCTTGAAGGTGGTGACTGGTTCAGTAACCAACCTCAAGATCTCCACATGTTACAGAGTCATCATCAAGATTTCAGATTCCTCGGTGGTGGTTTCGCCTTTAATCCTAACGATAACCTTCTTCTTGATTCTTCTTCCTCTTGCTCTCCCTCTCAAGCTTTTGGCCTCGACATGTCTCATCAGCCTTCGTTCTTGGCCGCTGCTAACAACAAGTCTTGTCTCCTCAACGTTGCAAACCCTTTTGATAATAATGCCTTTGAGTTCGGGTCTGATTCTGGCTTTCTCGGACATATCCAAGCTCCTATGGGGTTCGGTTCGTTGATGCAGTTGGGGAACAACAACTCAACGCCGTTATGTGGAGGTGGAGGTGGAGGTGAATTCACACCGTTGGAGTTAGAGGGTTTCGGGAGTCCTGCGAGTTTTGTCGGGAGCAGAGCGAAGGTTCTGAAGCCTTTGGAGGTGTTAGCTTCGTCCGGTGCACAGCCTACTTTGTTCCAGAAACGTGCAGCCATGCGTCAGAGCTCAGGGATGATGAGGAAGCTGAGCGATGATGGAGAGATGGATGAGACTGGGGTTGAGGTTTCAGGGTTGAACTATGAGTCTGATGAGCTGAACGAGAGCGGTAAAGCCGCTGAGAGTGTTCAGAACGGTGGAGGAGGTAGAGGGAAGAAGAAAGGAATGCCAGCAAAGAATCTTATGGCTGAGAGGAGAAGGAGGAAGAAGCTTAATGATAGACTCTATATGCTTAGATCAGTTGTCCCCAAGATCAGCAAAATGGATAGAGCATCAATACTTGGAGATGCAATTGATTACCTCAAGGAGCTTTTACAAAGGATCAATAACCTTCACAACGAGCTCGAGTCAACTCCAAATGGATCTCTCCCTCCAACTTCATCAAGCTTCCATCCATTAACGCCTACACCGCAGACTCTCTCTTGCCGCGTCAAGGAAGAGTTGTGTCCCTCTTCTTTGCCAAGCCCTAAAGGCCAGCAAGCTAGAGTTGAGGTTAGATTAAGGGAAGGAAGAGCGGTGAACATTCACATGTTCTGTGGTCGTAGACCTGGACTTTTGCTGGATACCATGAAAGCTTTGGATAATCTTGGATTGGATGTTCAGCAAGCTGTGATCAGTTGTTTCAATGGGTTTGCCTTGGATGTTTTCCGCGCTGAGCAATGCCAAGAAGGACAGGAGATATTGCCTGATCAAATCAAAGCAGTGCTTTTCGATACAGCGGGCTACGCTGGTATGATCTGA
Protein Sequence
- >Bo00285s440
MVLDGNGGAVWLGGGGGGGGGERVHEEEDGAAHFKPMLEGGDWFSNQPQDLHMLQSHHQDFRFLGGGFAFNPNDNLLLDSSSSCSPSQAFGLDMSHQPSFLAAANNKSCLLNVANPFDNNAFEFGSDSGFLGHIQAPMGFGSLMQLGNNNSTPLCGGGGGGEFTPLELEGFGSPASFVGSRAKVLKPLEVLASSGAQPTLFQKRAAMRQSSGMMRKLSDDGEMDETGVEVSGLNYESDELNESGKAAESVQNGGGGRGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINNLHNELESTPNGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLDTMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIKAVLFDTAGYAGMI