Information report for Bnascaffold2902G0000200ZS
Gene Details
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Functional Annotation
- Encodes ACTIN-RELATED PROTEIN6 (ARP6), a putative component of a chromatin-remodeling complex. Required for both histone acetylation and methylation of the FLC chromatin in Arabidopsis. Along with PIE1 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). Incorporation of this variant histone into chromatin mediates the ambient temperature response. Located at specific regions of the nuclear periphery. Expression throughout plants shown by in-situ and immunolocalization methods. Mutants show defects in fertility, leaf, flower and inflorescence development and shorter flowering times. ARP6 also is involved in globally controlling developmental responses to ambient temperature through incorporation of variant histone H2A.Z into chromatin.
Homologous
- Arabidopsis thaliana — AT3G33520
Gene Resources
- Pfam: PF00022
- UniProt: A0A816ZS98
- EMBL: HG994362
- AlphaFoldDB: A0A816ZS98
- InterPro: IPR000504 , IPR001878 , IPR002130 , IPR004000 , IPR012677 , IPR029000 , IPR035542 , IPR035979 , IPR043129
- PANTHER: PTHR45843 , PTHR45843:SF1
- SUPFAM: SSF50891 , SSF53067 , SSF54928
- PROSITE: PS50072 , PS50102 , PS50158
- Gene3D: 2.30.36.70 , 2.40.100.10 , 3.30.420.40 , 3.30.70.330 , 3.90.640.10
- CDD: cd10210 , cd12235
Sequences
gDNA Sequence
- >Bnascaffold2902G0000200ZS
CAGTGAAAGAATCTTCTCCGACATCGAGCTGATCCAAGTTCTTCGTATTCAGCCTTGGTGACACACATGGACTCAAAATCTGGGCTCGAAGCCAAAAGGGAACCCCCTCTCCATACACCTAGTATGGGGCTGCAACCATTATAAAAAAAAAAATTATTTGCAAATTAAAAGAGAAGAGTTGGTGTTGGTGTTGGTTAATAGGAAAGGATTGTCGAGTTTATTTACTCCTCCTGAGTTGTTATCTTGACATCAAAGTGGTCTGGGACAAGTGGTCGAAGCTCTCTTTCACTGCATTAATAAAATCGTATTACTCACCACACCACTGATAACTGCTTCATCGTATACAAAATGTAAACTTACAGCCTCTCCTTAAGTTGAGGAAATAAAGTGCTTCCACCAGTTAAGATGATGCTGCCACAGAAAAGCAACAAACATCAGACAACAACACAGCTCATTAATTCAATGGGGGGCAAAGTCAAAAAACTCATATTACCTTTGGTACAAAACAGGTTGCAAGTAAGAATGGCATGAGCTAACAGCTCGGACAATGCACTCTGCAATTCCCGCCTGATTCATCCCTGTCCAAAGTAGAGTAGCATCAACATCTATCTCTCCCGACAAAACCTTCATCACCTATATAATTAACGCGACACTCTTGGTGTTGAGAGAACAAACCTAGATCTGCAGGCTGGAATAACGTCTCAGGTACAAGAAAACGCTCATTTGTCAAGTCAATCTCCTGCAACCAACCAACCAACCATACAAGCTTCAGAACAAAAAATCCCTACAAGCACAGAGAGAAGAGAATGGGAATCTTTTCTTTTTACGTTTTTGTTCATGTCAGCCTTCTTCTTCTCAACGTCAACCTTATCCATGACAGTGTTAGCTCCTCCATCTGATAACCCTAAAGTAAGGAAGCTTTTGGCAGATTGAGGATCTTTGACATAACCTTTGGTATGTGTGACACCATCAGGAAGAACATACGTAGACTTTAGCACGTTCCCAGTACGCCGCTCCCTGTTAACAATCTCTATACATAAAATGACTGACGAAGATTGAAGAAGATAGAAAGAAAGAAAGAAAAAAGAAGGAACCGAGCAAGGTTGAGATCACGGTGGAGGTCAAGAGAGACGAAGCAGAGCTTCTCTTTAGCATCATCCATCAAGAAAGTCTGATCCATCACATTTATGGATCGATAAGACACCAACTCCTTCAAGTAATTAGTGAAAGCTTTGCCTCCGAGATCGATCCTCTTGACGGCGTAGTTGAGCGTGAAGTTGTGGAGGACGGGGACGGCGTGAGTGAAGGAGAAGCCACAATCCACGACGAGGCTACACTGAGTCCGCGAGAGGATGGACCCTGGCTGGCGACTAGCCTCGTAGAGATGGACGAGTGACTGAGGATTAGCCAGGTAGAGGGACGAGAAGCCGAAATCCTCGAACACCAGCTCGTCGGTGGCGCGTTGGACGGAAGGGATGGAGAGTGGCGGCTCGGTGAGGAGGAGGGAGGAGGAGGTTGGGGTGATGCGGAGGAGTGAGCTGAAGAGGTGTGACCAGATGTCGCGTTGCAGGTCGGGGTTTATGAGGTAGCCTCGGTCGATGGGGCGCCGGACGGCGGCGGAGGTGAGGTCGATGTCGACGTCGAGGTCGGAGAGAGGAGGAGGATAGATGAATTTCTTGGAGGAGAGAGGCTTGAAGAGGCAGTTTGGGATGACGACGAGGGGGTCACGCTCGCCGCCTTGGCCGGCTTTGATGAGACCACCGCCGTTGTCTAGCACCACTATGTTGTTCGACAT
CDS Sequence
- >Bnascaffold2902G0000200ZS
ATGTCGAACAACATAGTGGTGCTAGACAACGGCGGTGGTCTCATCAAAGCCGGCCAAGGCGGCGAGCGTGACCCCCTCGTCGTCATCCCAAACTGCCTCTTCAAGCCTCTCTCCTCCAAGAAATTCATCTATCCTCCTCCTCTCTCCGACCTCGACGTCGACATCGACCTCACCTCCGCCGCCGTCCGGCGCCCCATCGACCGAGGCTACCTCATAAACCCCGACCTGCAACGCGACATCTGGTCACACCTCTTCAGCTCACTCCTCCGCATCACCCCAACCTCCTCCTCCCTCCTCCTCACCGAGCCGCCACTCTCCATCCCTTCCGTCCAACGCGCCACCGACGAGCTGGTGTTCGAGGATTTCGGCTTCTCGTCCCTCTACCTGGCTAATCCTCAGTCACTCGTCCATCTCTACGAGGCTAGTCGCCAGCCAGGGTCCATCCTCTCGCGGACTCAGTGTAGCCTCGTCGTGGATTGTGGCTTCTCCTTCACTCACGCCGTCCCCGTCCTCCACAACTTCACGCTCAACTACGCCGTCAAGAGGATCGATCTCGGAGGCAAAGCTTTCACTAATTACTTGAAGGAGTTGGTGTCTTATCGATCCATAAATGTGATGGATCAGACTTTCTTGATGGATGATGCTAAAGAGAAGCTCTGCTTCGTCTCTCTTGACCTCCACCGTGATCTCAACCTTGCTCGGGAGCGGCGTACTGGGAACGTGCTAAAGTCTACGTATGTTCTTCCTGATGGTGTCACACATACCAAAGGTTATGTCAAAGATCCTCAATCTGCCAAAAGCTTCCTTACTTTAGGGTTATCAGATGGAGGAGCTAACACTGTCATGGATAAGGTTGACGTTGAGAAGAAGAAGGCTGACATGAACAAAAACGAGATTGACTTGACAAATGAGCGTTTTCTTGTACCTGAGACGTTATTCCAGCCTGCAGATCTAGGGATGAATCAGGCGGGAATTGCAGAGTGCATTGTCCGAGCTGTTAGCTCATGCCATTCTTACTTGCAACCTGTTTTGTACCAAAGCATCATCTTAACTGGTGGAAGCACTTTATTTCCTCAACTTAAGGAGAGGCTTGAAAGAGAGCTTCGACCACTTGTCCCAGACCACTTTGATGTCAAGATAACAACTCAGGAGGACCCCATACTAGGTGTATGGAGAGGGGGTTCCCTTTTGGCTTCGAGCCCAGATTTTGAGTCCATGTGTGTCACCAAGGCTGAATACGAAGAACTTGGATCAGCTCGATGTCGGAGAAGATTCTTTCACTGA
Protein Sequence
- >Bnascaffold2902G0000200ZS
MSNNIVVLDNGGGLIKAGQGGERDPLVVIPNCLFKPLSSKKFIYPPPLSDLDVDIDLTSAAVRRPIDRGYLINPDLQRDIWSHLFSSLLRITPTSSSLLLTEPPLSIPSVQRATDELVFEDFGFSSLYLANPQSLVHLYEASRQPGSILSRTQCSLVVDCGFSFTHAVPVLHNFTLNYAVKRIDLGGKAFTNYLKELVSYRSINVMDQTFLMDDAKEKLCFVSLDLHRDLNLARERRTGNVLKSTYVLPDGVTHTKGYVKDPQSAKSFLTLGLSDGGANTVMDKVDVEKKKADMNKNEIDLTNERFLVPETLFQPADLGMNQAGIAECIVRAVSSCHSYLQPVLYQSIILTGGSTLFPQLKERLERELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGSARCRRRFFH