Information report for Bnascaffold0026G0060200ZS
Gene Details
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Functional Annotation
- Isolated as a semidominant mutation defective in red -light responses. Encodes a nuclear localized bHLH protein that interacts with active PhyB protein. Negatively regulates phyB mediated red light responses. Involved in shade avoidance response. Protein abundance is negatively regulated by PhyB.
Homologous
- Brassica oleracea: XP_013632091.1, Bo4g192880
- Brassica rapa: XP_009142152.1, Bra037742, XP_009142153.1, XP_009133563.1, XP_009133562.1, Bra000283
Gene Resources
- Pfam: PF00010
Sequences
gDNA Sequence
- >Bnascaffold0026G0060200ZS
TGGAACATCAAGGTTGGAATTTTGAGGAGAATTACAATTTGTCCAACAATAGGAGACCTTTAAGGTATATTATGTTTAATCTAACTATTCATTTTGCATCTTTTTGAAAAATCTATATAATAGTATCCTGAGTGTATATATTTGTAGGCCACAAGATGAACTAGTAGAGTTGTTATGGCGAGATGGGCAAGTGGTTCTACAGAGCCAAACTAACAGAGAGCAAACCCAAGCCCAAACTGTGAAACATGATCATCATCAAGAAACCCTAAGATCCCAAACATTTCTTGACGATCAAGAAACCGTCTCTTGGCTACAATACCCTCCATATGAAGACCAATTCATAACCGACGGCTTCTCATCTCATTTCTTCTCAACCGGTAATCCCCTGGAGAGACCAGCCCCAGAGACGGTTAAGCACGAGGCCGGTCCTGACCCTCCAGATCAGGCCATGCCCCTCCTAAGTTTAGGTTAACGAATTCATCATCAAGTGTCAAAGAACTAGGAAAGGAACAATACTCGGTGGTGACCGTTGGACCGAGCCATTGCGGAAGCAGCCAATCTCATAACAATCTTGATGTCTCAATGCGTCATGATCGGAGCAAAACTGTCAATGAAAGGCTTTACCATAACGCAGGTTCATCATCAGGTGGCTCCTCTGGTTGCAGCTTTGGCAAGAACATCAAAGAAATGGCTGGCGTACAAAGCATTACAACAGACCGTAAGAGAAAACATATAATAGACACTGATGGATATGTGTCTCAGTCAGATGTATGTTTTATTTTTTAGCTCATAATGTTAAGTTCTTGAAACGTGTTTCCGTACATTGCTCATATTTTTTTTATGTTTTATTTGGTTTACATTGCTCATATTTCTTGAAACGTTTTACAGGTAATAGGTAACAAATCGAACCAACCATCAGGATCAACGCGCAGGAGTCGAGCAGCTGAAGTTCATAATCTCTCCGAAAGGGTACTTCATCGGTTCGTCTAAATATAATTACTTTTGTCAAAAAAAGCTATATATAATTATGTATGATATATATATTTTTTTGATCAAAATTATGTATGATATATATAGTAATTAATGTTAGTAGATTGTATATTTGGACAAAGAGAAGAAATATAAAACTGTTATGTGTTAATTAAAATAGAGGAGAAGAGATAGGATCAATGAGAGAATGAAGGCTTTGCAAGAACTAATACCTCACTGCACTAAAGTAAGTTTTTTTTTTTGAACATTAGCACTAAAGTAAGTTTTTTTAATATGATACGGAGATTGATTGATTAAATTGAAAAACTTGCTATTAATTTTTTTTTTTTTTTGCAGACCGATAAAGCATCCATTTTGGACGAAGCCATAGACTACATGAAGTCACTTAAGTTACAACTTCAAGTTATGTGGATGGGGAATGGAATGGCTGCTGCTGCGACAGCTCCGATGATGCTCCCTGACGTACAACCTCAGCCGTTCATCCGCCAGATGCAGAGCCCGGTACAGCTGCCTCGATTTCCGGTTATGAACAATCCCGGTATAGTTTGTCAAAACCCGGTACAAAACCAAGTTTTCTCCAATCGGTTTGATAGATACATTGGCGTATTCCCACAGATGCAGGCTGCGTCTCAGGTAAGGCTCATACGACGTAGACTATTTACTTGAGTGTTATTGAGCATCAACGACGTCGTCTGCTTTAGTGCTAACTGCTAAACGACTTATGATGATTTGACACGTTGTGGTTTGATATTATACGCAGCCGATGGCGATGCTGAGATTTGGTTCTCAGGCGGGACAGCAAAGTCAACAACCGTCTGCGCCGACGAAGACAACCGACGGTTCTCGTTAG
CDS Sequence
- >Bnascaffold0026G0060200ZS
ATGGAACATCAAGGTTGGAATTTTGAGGAGAATTACAATTTGTCCAACAATAGGAGACCTTTAAGGCCACAAGATGAACTAGTAGAGTTGTTATGGCGAGATGGGCAAGTGGTTCTACAGAGCCAAACTAACAGAGAGCAAACCCAAGCCCAAACTGTGAAACATGATCATCATCAAGAAACCCTAAGATCCCAAACATTTCTTGACGATCAAGAAACCGTCTCTTGGCTACAATACCCTCCATATGAAGACCAATTCATAACCGACGGCTTCTCATCTCATTTCTTCTCAACCGGCCATGCCCCTCCTAAGTTTAGGTTAACGAATTCATCATCAAGTGTCAAAGAACTAGGAAAGGAACAATACTCGGTGGTGACCGTTGGACCGAGCCATTGCGGAAGCAGCCAATCTCATAACAATCTTGATGTCTCAATGCGTCATGATCGGAGCAAAACTGTCAATGAAAGGCTTTACCATAACGCAGGTTCATCATCAGGTGGCTCCTCTGGTTGCAGCTTTGGCAAGAACATCAAAGAAATGGCTGGCGTACAAAGCATTACAACAGACCGTAAGAGAAAACATATAATAGACACTGATGGATATGTGTCTCAGTCAGATGTAATAGGTAACAAATCGAACCAACCATCAGGATCAACGCGCAGGAGTCGAGCAGCTGAAGTTCATAATCTCTCCGAAAGGAGGAGAAGAGATAGGATCAATGAGAGAATGAAGGCTTTGCAAGAACTAATACCTCACTGCACTAAAACCGATAAAGCATCCATTTTGGACGAAGCCATAGACTACATGAAGTCACTTAAGTTACAACTTCAAGTTATGTGGATGGGGAATGGAATGGCTGCTGCTGCGACAGCTCCGATGATGCTCCCTGACGTACAACCTCAGCCGTTCATCCGCCAGATGCAGAGCCCGGTACAGCTGCCTCGATTTCCGGTTATGAACAATCCCGGTATAGTTTGTCAAAACCCGGTACAAAACCAAGTTTTCTCCAATCGGTTTGATAGATACATTGGCGTATTCCCACAGATGCAGGCTGCGTCTCAGCCGATGGCGATGCTGAGATTTGGTTCTCAGGCGGGACAGCAAAGTCAACAACCGTCTGCGCCGACGAAGACAACCGACGGTTCTCGTTAG
Protein Sequence
- >Bnascaffold0026G0060200ZS
MEHQGWNFEENYNLSNNRRPLRPQDELVELLWRDGQVVLQSQTNREQTQAQTVKHDHHQETLRSQTFLDDQETVSWLQYPPYEDQFITDGFSSHFFSTGHAPPKFRLTNSSSSVKELGKEQYSVVTVGPSHCGSSQSHNNLDVSMRHDRSKTVNERLYHNAGSSSGGSSGCSFGKNIKEMAGVQSITTDRKRKHIIDTDGYVSQSDVIGNKSNQPSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCTKTDKASILDEAIDYMKSLKLQLQVMWMGNGMAAAATAPMMLPDVQPQPFIRQMQSPVQLPRFPVMNNPGIVCQNPVQNQVFSNRFDRYIGVFPQMQAASQPMAMLRFGSQAGQQSQQPSAPTKTTDGSR