Information report for BnaC09G0427800ZS
Gene Details
|
|
Functional Annotation
- Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3’UTR.
Homologous
- Arabidopsis thaliana: AT3G15270
- Brassica oleracea: Bo9g137270, Bo1g129690, Bo5g127310, Bo6g031220, Bo6g029290
Gene Resources
- Pfam: PF03110
Sequences
gDNA Sequence
- >BnaC09G0427800ZS
TATGGTCGTTTGAATGATGTGTCGGCCATAGGAAGTTTCATGTCTACCTTGTTTCTTTCTTGAGTCTGGATCAGTTGACAGCTAAACCCTCTCCGGCCTGACCTTTCGCCGAAACTGTCACCAGAAACCTTCCTTATCCTCTCATTGTGTTCAGCTAGGCGCATCCGGCTATTAAGGAAACAAGTATAACTCTATTTATGTAAAAGACTTCATAGTCATTAGTTTGTACAAAACCCTACAACCCTTGTACCTATATATAACTGGCTGTACATCTTCATCTAATAATAAGAATTATATTCTTTATGGTATCATAACCTCCCGATCTACACAAAACCTAAATTTTTTTTTTCATATTCTTCAATGGCGGCTAACAACAGCTCAGTGCTATTCACTGAACACAACATCCCAAACACACCAGGCCTTCTTACCATCAACATGGCTAATGTCACCAAACTCACCTCTGATAACTACTTGATGTGGAGTATCCAAACACAGGCGCTTCTTGATGGCTATGGTCTCGCAGGCCATATTGACGGCTCCCATCCCATACCACCACCACAAGTCACGGTCAATGAAGTGACTACTGAAAACCAAGACTATGTCTTATGGAAACGTCAAGATCGCCTTATTTTCAGCGCACTCATCGGAGCTATTACCACCAATCTTCAACCGATTGTCTCCAGAGCGGTCACAGCCTTCGAGATCTGGACGACACTAGCAAACACATATGCTAAACCTAGCCGTGGCCATATCAAACAGCTACGAGATCAGGTACGGGCCTGGAAGAAGGAAGACAAGAAAATTGACACATACATTCAAGGCTTGACGACAAGATTCGATCAACTTGCACTCCTAGGCAAGCCGTTTGATCATGAAAACCAGATTGATGCGATATTAGGGGGTCTTCCTGATGACTACAAGACTGTTAAGGATCAGATTGAAGGACGCGACGACGTACCTCCTTCCATCACTGAGATCCATGAGAGACTGATCAATCATGAACTGCGACTGTCCTCTCTCTCACCGCAGCCTGGCTCCACATTCCCCGTTACTGCAAACATTGCACAACAACGCTCCAACAACAACTTCAGCAACCGCAACCCTCGTAACAACACAAGCAGCAACAACTATCGTGGAACCACAAGCAACTGGCAAGCTCAGTCTTACAACAACAATAACCGGAACACAAGCAAAAGACCTCGGCCCTATCTTGGACGCTGCCAAATCTGTGGCACTCAAGGACATGGTGCGAAACGTTGTCCTCACCTCCAGTCATTCCAAGCCGGTCAACAACTTCAGCAGAACTCACCATTCACACCGTGGCAGCCAAGAGCCAACCTTGCTGTCAATGCTCCCTACAATGCTGAGAACTGGCTCCTCGACAGTGGGGCTACACACCATCTCACCTCAGACCTGAACAACCTATCTCTCCATCAGCAGTATCACGGAGGAGATGACGTTACCATCGCAGATGGCAGCAGCCTTCAAATCACCCACACCGGTTCCCATACTCTTCCCTCAAACTCTAGAAACTTACTGCTAAATAAAATTCTTTGCGTTCCAAATGTTCATCGCAACTTGATATCAGTGTATCGACTGTGTAACACTAACAATGTCTCCGTGGAATTCTTCCCGGCTGATTTTCAGGTAAAGGATCTCAGCACGGGGGTGCCGTTACTCCAAGGCAGCACTAAGCAGGGTCTGTACGAATGGCCGATCTCAAAGCTCCAAGCAGTTGCGATGCTCACCTCCTCTCAACCAAAGGCGACTATATCTCAGTGGCACTTAAGACTAGGCCATCCGCATATCTCTGTCCTAAACACTACTCTTCTGAAATTTTCTTCACCTCTTTTGCATTCAAAACAAAAAGATTTCACTTGTTCTGATTGTCTTTCTAATAAAAGCCTTAAACAGCCTTTTTCAAATTCCACCATTGTCTCAACAAAACCACTCGAATACATTTTCTCAGACCTCTGGTCATCCCCAATTCTCTCTACCGAAAACCATAAATATTATCTCCTCCTCATTGATCACTATACACGCTACTCATGGCTGTACCCACTTAAAAGAAAATCTGATGTCAAGGATATCTTCAAAACCTTCAAGCCCTTGGTAGAGAATAAATTCAAAACCAAAATTGGAACGCTCTACTCCGATAACGGTGGCGAATATATTGCCTTGAGATCCTACTTAGCTGAGCAAGGGATCACGCATCTCACATCTCCGCCGCATACGCCGGAACATAACGGTATGTCTGAGCGCAAACACAGACACATTGTAGAAACAGGCTTGACGCTGCTCTCCACTGCGTCTGTTCCGAAATCACTGTGGCACTATGCATTCGCCACAGCTGTGTACCTGATAAACAGAATGCCCACGACTGTTCTTCATAACCAATCTCCATATCAGAAACTGTTCCAAACAGATCCGAACTATGCGAAACTGAAAGTTTTTGGCTGCCTATGCTTCCCGTGGTTGAGACCATACACTCATCACAAGCTTGAAGATCGATCCCAGCCTTGTGTCTTCGTCGGCTATTCCACATCACAAAGTGCCTACTATTGTCTGCACAGACCAACGGGCAGAGTGTTTACTTCAAGGCATGTTACTTTTGTTGAAGATCAGTTCCCTTACTCCGGTCAGCAACCAGTGCCTCAGGCCCTTCCGGAAACTACACAAACTGCCGCGAGCTCCCCACCTCATCAAGTTATACCGGTGCTTCAAAGACAAGCGACTACACCAGTAACGGCCCCGTGCTCGATTCTTCACCAACCACCATCAGTACCTCCGCTAGCTCCGCCGCAATCGACAACCCCTCAGCAAAAGAATGGGCAAAATTCCCAAGCCTAGTCTCCAGCCCAACAACACCAAGCCACAGACCAAACACTCAACCCAACTCAAATGGCCCAAGAGGCTATGACTCAAACTCAGCCACAACCTACTCCACTAAACACGAACCCGACTTCTTCTTCTTTGCTAACTCAACAAACAACCTCAGCACAAAATACAGAAAATCAGCCACAGCCAGTCCCGACTATCACCTCACAAAATCAACATCCAATGCAGACAAGAGGCAAGAACCGCATCTCCAAACCAAACCAAAAATTCACTCTTCTTGCCACAACCAAACCGTTAACATCTGAACCCACAACCATTATCCAATCTTTGAAAATGAACAATGGAGAAAAGCCGCGTCTACAGAGTACAATGCACACATGAGAAACCACACTTGGGATCTCGTACCTGCAGCGCCAAATCAAAATTTAGTTGGATGCAGATGGCTCTTTACAACAAAATATCTACCAAATGGAAAGGAAGAACGAAAGAAAGGACATCTAGTCGCCAAAGGTTACAATCAACGCTATGGTGTTGATTACGCAGAAACGTTCGGCCCGGTCATCAAAACCACAACCATACGACTTGTACTTGACATTGCGGTACATGGGAACTGGACCATCAAACAGTTGGATGTTAACAATGCGTTTTTGCAGGGTGACCTTCAAGACGAAGTCTACATGATGCAGCCCCCCTGGATTCATTGATCGCGACAGACCATCATATGTGTGTAAGCTGCGAAAAGCAATCTATGGACTCAAGCAAGCCCCGCGCGCTTGGTACTTGGCATTGAAACAACATCTCACTTCAACCGGCTTCAACAACTCTCTTGCGGATGCGTCTCTGTTCACAAGGATTGTAAATGGCAGTTACACATACATACTCATCTATGTCGATGACATTATTGTCACTGGAAACGACAGGAAGGCCATTGATCAGGTCCTACACACGTTTGCGGATCGCTTCTCCATCAAGGATCCGGTTGATCTCTATTACTTTCTTGGCGTCGAAGCAACGAGAACAACAGATGGTCTCCACTTATGTCAACGTAAATACATCATTGATCTGCTCATCAAAACAAAGATGCACGATGCTAAACCAGTAACTACCCCATTACCTACTTCACCAAAACTCACTCTCCATGGTGGCACTCTTCTCAAAGACTTGACGGAATACAGGTCAGTTGTAGGGAGTCTTCAGTATCTAGCGTTCACACGCCCAGACATTTCTTACGCAGTCAGTAGACTCTCTCAGTTCATGCACCGCCCCACGACAGATCATTGGCAAGCTGCGAAGCGAGTCTTACGATACCTAGCAGGCACACCAACTCATGGAATTCTCCTCTCTAGACGTTCACCTCTCACATTACATGGGTTCTCGGATGCAGATTGGGCAGGTGACACCGATGACTACATCTCCACAAATGCATATATCATATACCTTGGATCAAATCCAGTTTCTTGGTCCTCGAAGAAGCAAAATGGTGTTGCGAGATCCTCAGCAGAAGCGGAATACAGGGCAGTTGCGAACACAGCTTCAGAAATACGGTGGCTCTGCTCTCTTCTCCATGAACTTGGCATCCGCATTCCGACAATGCCTGTGATCTATTGTGATAACATCGGAGCAACATATCTCTGTGCTAACCCGGTTTTCCACTCCAGGATGAAGCACATTGCACGACTACCACTTCATACGTCAGCTCATTCAATTGGGTGCGCTAAGAGTCTCACATGTTTCCACACACGACCAACTAGCCGACGCCTTGACCAAACCATTAGCTCGCTCCAAGTTCAGTCATGCATGTTCCAAGATTGGAGTGACTCAAGCCCCTCCATCTTGCGGGGCTGTATTAAGGAAACAAGTATAACTCTATTTATGTAAAGGACTTCATAGTCATTAGTTTGTACAAAACCCTACAACCCTTGTACCTATATATAACTGGCTGTACATCTTCATCTAATAATAAGAATTATATTATTTAACGGCAACTTCTTTTAGCTTCATCAAACTCTGGTAGCTCATGAAACCTGATCAAACCCAACCCAAGCCCAAAGTATCAAATCGAAACACAAACTTCGTCTTAATAAACTTTAGAAAGTAATATTGAAGGGAAGAATAGTACCTGCTGCATTGTTGACAAAAACGTTGCTTGGCGCCTGAAACAGTTGCAGCAGATGCCTTTGCATGAACTTCACAGACTTTGTGTCTGCGTTAATACTGCTTGGCTTCAATTAAATTAGCAGTGCACCTATGGTGGAACACGGTCTGTGTTAGTACCCCTAGCTCTCTCCATCACTCTCTTCCTTTTGTCTTCATCTCCTACATCCTCCTCTTCTCCATCCATGCTATTCTCCCATTCTTGTTCAGCAAGGTTGGAGACTATAGCCTTGTCTTTCACGTAACTCCAGCGTTGTGATTTCTCCAT
CDS Sequence
- >BnaC09G0427800ZS
ATGGAGAAATCACAACGCTGGAGTTACGTGAAAGACAAGGCTATAGTCTCCAACCTTGCTGAACAAGAATGGGAGAATAGCATGGATGGAGAAGAGGAGGATGTAGGAGATGAAGACAAAAGGAAGAGAGTGATGGAGAGAGCTAGGGGCGCCAAGCAACGTTTTTGTCAACAATGCAGCAGCCGGATGCGCCTAGCTGAACACAATGAGAGGATAAGGAAGGTTTCTGGTGACAGTTTCGGCGAAAGGTCAGGCCGGAGAGGGTTTAGCTGTCAACTGATCCAGACTCAAGAAAGAAACAAGGTAGACATGAAACTTCCTATGGCCGACACATCATTCAAACGACCATAG
Protein Sequence
- >BnaC09G0427800ZS
MEKSQRWSYVKDKAIVSNLAEQEWENSMDGEEEDVGDEDKRKRVMERARGAKQRFCQQCSSRMRLAEHNERIRKVSGDSFGERSGRRGFSCQLIQTQERNKVDMKLPMADTSFKRP