Information report for BnaC09G0289100ZS
Gene Details
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Functional Annotation
- AGL12, AGL14, and AGL17 are all preferentially expressed in root tissues and therefore represent the only characterized MADS box genes expressed in roots.;Encodes a MADS‐box protein
Homologous
- Arabidopsis thaliana: AT4G11880.1
- Brassica oleracea: XP_013609178.1, XP_013609177.1, XP_013609176.1, XP_013609175.1, Bo9g093920
- Brassica rapa: XP_009114656.1, XP_009114655.1, Bra029424
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: A0A3P6EA19
- EMBL: LR031875
- AlphaFoldDB: A0A3P6EA19
- OMA: IHENTQI
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- SMR: A0A3P6EA19
- CDD: cd00265
Sequences
gDNA Sequence
- >BnaC09G0289100ZS
TAATTTGGAGGATGAAACTTTTTGTAGTGTCGGATCGGAGGAGGTCCAATCAACAAATCAGTCACCACTTCCATTTCACTCTCCTCTGTGTCCAAGTCTTCTGATGTTGTTTTTGGTATTATTCCTCCTCTTCCCATCTCATACTTTTTTATTCACACATTCTCAAATTAATATTCTCGTATAATAAGAGGAGATAATTTCATAATGATAGAGCTATAGAGAACAGTACACCAATACGTTATTAAATATAGAAAAGTCATATGTTATAATCAATATATACCTTCTCCAGCAGCATTTTGTTTTCTGCAGTGAGGTTTCTCTCCTAAAACATTGAAAAGGAACCAGAGAATGGTTTAATTAGAAGACACAATTAGTACCTGATTTTTTTTTATCAAAATGAAAAAAGCTAGAGGTTTATGAGTTTTACCTTTTCTTTTAACTTGTCCAGTTCTTCACGCAGTAATTGGTACTGCAATTGAGAAATAAAATAGCTGTGGATAAATTGCTTAAACTGTTTATAAGATCTCTCTTACAAATACGGTCATTTGTTTCTAATCATTGACCCTTGAAACCATCCTATCTTACTTGTGCGTAATGCACATATACTTGCATGCATCCATGTGAGTGTATGGTATGGTCCTATGATTATTACCTTCAATATATGTAATATTTATCAACCCAACCACAACGTCATACTCTTAAATATCGAGCAAAGTAACAAAACTCTTATTCATCTTCATCTGCCAAAGTAAATGATCAGAGATATAAGTTACCTTTTTCGCTCTTATTTTGGTTAAGCTTCGCTCCAGCTGGTTTTCCAATTGTTGTAACTCCTCAATAGAAGATGCGTCGAGTCCTTCTCCTAGAAATTTGCTGTATTTTTTTTAAACATGATAATGTTATATATTTTATAAATAGACAATAAAATGTCCAATTTTACATTAATAGAATAAAAATTAAAAATTTTGGATTCAAGAACCGTTTTGAAATCTCAAGTTGTTCGATCTTTCTCGCTAAGCCATAGGTTTCGCCTTTTGCTTGCTGTAAACAGGTTTGATCATGTCAAAATAACAAACATAAAATTTATTGATCTATAAGAAAAAAGAGAAGCATTTTGTCAAATAAACAAATCTTTTAACCAAAATTGTAAAAATATGTAATATCGTCGTATGACCAATTAATTGAAGCGGAAAAACTAAAATGAATTATGATCGTTATTGATTAGTATGTTTGTAGCAAATGATCCATGCATATATGATATAAGTCTTTTTCTATGCATGTCTTTTTCTAAACGGTAAAGAATGAGCGGTGATAAAAAAAAAATTAAGTTAAAAATTAAAAAAAAAACACATTACCTGCGTGTTATCCTCCCTTTTATGGCTAGAGCCAAGATCATGTATTCGTTTCTGATATCGTTCTACTGTTTTTGTTATACTGAAAATTCCAAAAAGTCAAAATACAAGTCAATCTTACAAACCAAAAGAAATAAAATCAAATCGAATTACTGAGAACGAAAAAAATAAGGTATAAGTTTTTCAACAAACGCAAATAAAAGTGTATAAGTATTTCTATCATCTATATTTTATTTTTTAAATAAACATCACTACTTACACCTATATATAGACAAAGCTTTGAGGTAATAAAATTTGTTATCAATCATCTGCTGAAATTATAGAATAATGAAGATAAAGCCTCAATAACCATATAAATGATAAAATAAATTATGAAAATATAAGCAAAGAGATCTACATATGGATATGGCCTCATTATGTAATTAAAAAACTTGTTAACTATTTATGTTTCTTAAAAAGTGTCATTTTAGCAGTTTTTCATTTTTCGTGTAAAAATGCTGTTCTAGAATTTTAATGTAATTGTAAAATGTATTTCAGTCATTTTCTTATAGAGTGACACTTTATAAAACGAGGGAGTATATATGTACGTGGTTAAGCGTCTAGTTAATTGTGATTGACCAATCTCGGCTTTGCTATAAGAAACACTTTTTTTTAACACTGCTATAAGAAACACTTATCAATTGTTTTTTTGTCTAATAAAGTACGAACATATCATTAAAATAAACACATAATTAGCACACAGTATCATTTCCTATAATTTTTAAGGACGCAAAAAAAAAAAAAAAATTATAGAAGAAGCATGAAAAGAATCAACATATTCTGATCTAATCACATGCTGATGACTCCTTCAGTATCTGTCATCACTGAGATAAAGGCCTTTGTACTATGTGGGTCAAAAGTGTAGCAAATGCCTATTTGTTGCCAGCATATACGTTACATGATACATGCGTCTACCATATACACAATAAAAACGAAGTGTACGATACAAACATTTATATTATGATCTAACTAGCGACGGTGGACGCGGTATAGCTATGTGTCTAACTGGTAATTATGGTCTCAGAGAATAAACTGGCCGTGTGATGATTATTTCTATAAAAAGCAATGTTGTTTTGGAATTTTAAAATCTCAAATTGTGAAGACTTTTTGTATAAAAAACATTATTATCAACTAATTTTCTTAATATTTTTAAAAAATTCCGTAAAAATTAGCCATTTTTGATCAGTTAACATTTGACCAAGCATCAATCGATATATGTGTCCATGATCATTCCTAGCTATTATGAAATTATGTACACATAGATGAGTTTAGAAAGAAAATGTTTTTTTTTTGGAACGAGAAGAAACTGTTTCAAAATGTATATACAGTCACTCACGTAAATACGTGCACATACGTGATAATTTATGATGCAATATTTAGCTTCTCATCAGTATCAGTATAGAAAACCATTGATTGATTGATTCACACACTATACATATATACATATATAGTAGTCTATAACCATCTTTTTACTTCAAAAATATATGTGCAAGTACATATTAATTCAAATTAACATAGACAGTACATGTGCTTTAGTATATATATATACACCTATTTATATATGTGTCTGTGTTGGCGCATGTGTGTGTAAATTCTACCTACATATTGTGTATATACACACACAAGCACACATATATAAGGGAGACACACCTCTATATGAGGAAATATTGTTTTTTTCCAAATCTGGTTAATAGGAACCAAGCGAAAATAGAATCTAGGCATCTACTTCATATGAGACTCTTTTTTTTGCCTTATTCAGTTAGAACACTATATGCTCAGACTTACTGTTACGTATGCAGATTTAACTACTTGAATATGAATATTTTTGGCTCTTCTTTGTTAAAAGTGATTACTTTAAGTGGCATTTGCAAGGAAACCGTTTACCCATGTGCGAACCACGTTTTTACCAATGTCTCGCTTTCATTTTTCTGATTTATCTGAATTTTGTTTTCTCTCTAAAGTTAAGAATTTTAATTTTAGCACACATAAACCAAGCTATATATCAGTCGATTGATCTACTAACTAGAAACAAAAAAGAAGTGGAGAAAGTAATCATAAAAGAAAAAAAAAACTATTTAAAAAAAACAACTAATTATGGATTTATATAAAACACCTGCTTGACGATTCATGACAAATCTACATATCATGATGCATAGATCGATATACAGCGAATGAGTACATTACCTGGAGGAGCTAGAAAACTCATAGAGTTTGCCTCTAGGAGAGAAGATAACTAGGGCAACTTCGGCATCACAAAGGACTGATAATTCAAAGGCTTTCTTCAAAAGTCCATTTCTTCTCTTTGAGAAAGTCACTTGCCTGCTCGTCGCGTTCTCTATCCTCTTCATCTCCGTCTTTCCCCTCACCAT
CDS Sequence
- >BnaC09G0289100ZS
ATGGTGAGGGGAAAGACGGAGATGAAGAGGATAGAGAACGCGACGAGCAGGCAAGTGACTTTCTCAAAGAGAAGAAATGGACTTTTGAAGAAAGCCTTTGAATTATCAGTCCTTTGTGATGCCGAAGTTGCCCTAGTTATCTTCTCTCCTAGAGGCAAACTCTATGAGTTTTCTAGCTCCTCCAGTATAACAAAAACAGTAGAACGATATCAGAAACGAATACATGATCTTGGCTCTAGCCATAAAAGGGAGGATAACACGCAGCAAGCAAAAGGCGAAACCTATGGCTTAGCGAGAAAGATCGAACAACTTGAGATTTCAAAACGCAAATTTCTAGGAGAAGGACTCGACGCATCTTCTATTGAGGAGTTACAACAATTGGAAAACCAGCTGGAGCGAAGCTTAACCAAAATAAGAGCGAAAAAGTACCAATTACTGCGTGAAGAACTGGACAAGTTAAAAGAAAAGGAGAGAAACCTCACTGCAGAAAACAAAATGCTGCTGGAGAAGTATGAGATGGGAAGAGGAGGAATAATACCAAAAACAACATCAGAAGACTTGGACACAGAGGAGAGTGAAATGGAAGTGGTGACTGATTTGTTGATTGGACCTCCTCCGATCCGACACTACAAAAAGTTTCATCCTCCAAATTAA
Protein Sequence
- >BnaC09G0289100ZS
MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRGKLYEFSSSSSITKTVERYQKRIHDLGSSHKREDNTQQAKGETYGLARKIEQLEISKRKFLGEGLDASSIEELQQLENQLERSLTKIRAKKYQLLREELDKLKEKERNLTAENKMLLEKYEMGRGGIIPKTTSEDLDTEESEMEVVTDLLIGPPPIRHYKKFHPPN