Information report for BnaC09G0238500ZS
Gene Details
|
|
Functional Annotation
- Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1.
Homologous
- Brassica oleracea: Bo9g063040, Bo2g129860, Bo7g074140
- Brassica rapa: Bra017569, Bra022023, Bra025031
- Gossypium hirsutum: Gohir.A06G137800, Gohir.D06G143000
- Manihot esculenta: MANES_15G122100, MANES_17G070700
- Prunus avium: Pav_sc0003135.1_g540.1.mk
- Prunus persica: PRUPE_4G081400
Gene Resources
- Pfam: PF00888 PF10557
- UniProt: A0A816J6J0
- RefSeq: XP_013662902.1 , XP_013662903.1
- EMBL: HG994373
- AlphaFoldDB: A0A816J6J0
- OMA: KCINLMK
- InterPro: IPR001373 , IPR016157 , IPR016158 , IPR016159 , IPR019559 , IPR036317 , IPR036388 , IPR036390 , IPR045093
- PANTHER: PTHR11932
- SUPFAM: SSF46785 , SSF74788 , SSF75632
- PROSITE: PS01256 , PS50069
- Gene3D: 1.10.10.10 , 1.20.1310.10 , 3.30.230.130
- OrthoDB: A0A816J6J0
- SMR: A0A816J6J0
Sequences
gDNA Sequence
- >BnaC09G0238500ZS
AAAAAAAAAGCCCAAGTTGGGGTTGTAATAATCGGAACTTTGGAGTTTGTTCTTTTTCAGAAAGTCTCGGCCATTGTCTTGTGAATAAATATACAGTAATACAGAGCAGAGATAAATGTTGAAAAGACGGTTTAACAAAGAGAGATTATGACTAAGCAAGATAATTATATATCTGAGGGTTGGTCTTGTCCCTCTCCAAGTACTCTCGATCGATCAGGCTTTCTATCCTCTTCTTCAGATCCGCTGGTTTTATTGGGAACTTCAGCTGCAAAATCACAAACACGTAAACCATACGTTTGCTTAGTGTGCTACTTACTACATATATACAACGGTACTGAGAGTGAGAGCTCTCATCATCATAGCAACATGGTCAAAGATTAGAAGAGTCGAGGCTTTTTATATCGTCAAGAAAGAGAGGAAGAAAATTTACCTGTTGGAAGAGCTCGGTGATTAGGAGAGTATGGCTCAGGACTTTTCTCGTCTTCATGATTCGAACAATGGCTGCATCAATCTGTAAGGGAAGGAGCGTGATGAGAAAAGTCACTTAGTCAACTCTTTGATCGTGCTAAGAAAAAACAGTATCGTAAACCAACCTGGTATTGTCGGTCCTGGAATACTCTCTCTGTTGTACTCGTGTTCTCTTCTACCGTCTCTTTCATCTGGATTGCATTCACCTGCGCTCAGAAAATAATCATAAAATGGTTTATTACATATGTGCGAGATTCTAGAAACCTTTTAAGTGAAACAACCAAAAGAAAATAACTGACGTACCTTAATGCGATACAGAGGAGCGGTAAAGGTGTCATTAAAATCAAATTCATCCCCGTCTTGTACATCTCTTCCCTTGGGATACTGCAATAACATTTACACAAGGCGCATCAATATTTGGGGGAAAAAAATGCAAACCCACGATCTCAGTAGTTTCTGCGTTAGCAGAAAGGCTAGTTAACAGAGTCCAGTTTTTTTAGCCTAACCTTCTGCAGGACACGAACTTTCCCACAAGCAAGCGACTGAAGAGTCCTTCTCAGTTCTTTGTCCTCTATGCCAGTGGAATCTTTAATGTCTTCAAAGCTAAGTTTCATTGCATCGTTAAATAACATCAACACAACAGCCTGAGACAATCAAAGACAGTACGTGAGGAATAAAATTCAAAATGAGTGGTAGGAAAAGCTTGAAAAGGAAAAAAAAGAAGAAGAGAAAGTTGGACTGACCTGAAACAGGGAAACAGCAAGCTCCTTTTTACCTTTGGAGAAATCTGCCTTCAAAACACAGTGACCTAATGAGTTTTGCCACATTAACCTCCTCCCACTGTACTTGCTCAAATAGAACTCTTTGAAGATATCCTACGAAACAAACATATATACATTACAAAAAAAAACTTATGTAACAAAAAAAAAAACCATGGGGGACATATATACAAGGAACTTCTGGTAAAACCTGATAGACATTTAACTCATGAGGAAGTTTAACATCCATTGGTGGATATGTTGGCCAGTACCTGCATCATTCATGGAAGGTTAAAAAGCTGTTATAAATATCTCATTCTATACTGTATAGTCCGGGACGAATTTGATGTATAGTCATACCCTGTTGTTAGAACGTGGACACTCATCTCAATTCCTGATGGCAATTTTGTTCTGGCCTGAGACGATTGTTTGAATGACTCGTTGATTTCCTTTGACAATTCAATATCCTGGAGAAAATATTCAAAGAGAAATGAATACTAGGATATACTGTAAGCATAAAACTCCAGATCTTTATTCCTTTACTAAAAGTTTAAGACCAACATCCTTTTAAGAAAAATAGAGAAAGAGAAAGAAAAGAGGACCTTGAACATCCCTTCAAGCTTGTTTGTAAACTGACTACCACACTCAGTCTTGAGCTGTAGGTGTCACCAAGATTGGGTCAGCGGGTAAGAACTTACCGAAATAGAAACAGAAAATCAGTGGGAATCAATAGGCGTCTCTTTGCAAGATCCTTTTGTTACCTTAGAGATCATTGATTTCTCAGCATCAATGGAAGCGCTTTTTCCCAACAGGAGTCTCTTTGCAAGATCCTTTTTATAGAATGCTTCGAACACATCTTTACCCTTTGATCAGAAAAAAATAGAAATACTTCAGCAAAACTTAATTTAGATGGTCAAATAGCTGGTTTTCAGACCCGGAACAGTTATTCAACGTAGACAAACACAGCACTAGATGTAAAGAATCAGAGGTAACCTGGATAAATCTGAACAAAACCAAGACTTTCTCAAGGGTACTCTCCAATTCTTCTTCAGAAGTACCCTTGTTCCCAGCACGGAGCTTCTCGTCCAAAAATTTGGCGATAAGTTCAGCTGGACGATTCTGCAAAAACAGACCCGGAACATTTATCATTTAAACACGTACTAACATGCAAACTTGAAACATCTACAGATTTAATATAGTTAATACTAATGTGCACTTTGTCAAAGTGATTCTTGATATTACATAAGAATTTTTTTGCTCGATACTGGAGCTAGTACCATATACTGTATAAAATCGGTCAAAAGAGTATTTTGTATCCGAAGTGATACTAGCGACAACACTACTGTAACCAGAGCCCAAAAATATGTTTATACCCAGAGCCAAAAATGCCTCATTTTTTAAAAGTAAATACAGTACATAAGCATTGCTATAAATTCCACAGATTGCAACATTGTAGATTATAAGGTTGACACTTCCACAACAATCAGTATGTAGCTTTTATATGGAAGTAAAATTGTTAGCAAGAGATAAGTCAATCATCAGCAAAATAAATATTCAATACCTGGCGCAGATTTATCAGATGCTCAAATGAATCTTTAATGGTGTTGCCAAATGATTCATTCTTGCAAAAGCTGTCTTCCCATACTATGTCAAGAGAAGCCTTGAAGTCCAATAGTGATTGTACCATATCTTTATCTTTCTCTTCATCCATAACGATCTTCTGCCCAGTTTTCCGAGTGTAGGAACTTAACGCCTGCCTCATAGATTCAAGTGCAGTGACCCTAGAAAAAAGGGTGTACATCCTCTGGAGGTCCTCAGTACGACGTCCATCCATTAATGGTGTGAAACCCTGGAGTATGTTCAGACATAGAATAAGGGTAAAGCAAACAAAAATTTGCTAATATATGCAACCACAAGTATGACAGGATCTAAACCTTATCAAGGATAGCAACTATATGACGCTCGAGAAGTTGTTTTTCAACAGTTGATATCAATGGTTTCCTGGTTGATGCATCTATGTACAGTATGCATTTTTCATTCTCTTCATGCAACCTTCCCTGCATCAATCACCAGTAGAAACCTTAGAGAGATCAGATCAACTAATAACATGTAAGGATAAACTATATGAAGTAATGCAAGGCACCTCGACATGCTTCAGGTACTCGGGAACGTCATATTGCTGCATGTATTTCATTGCTTCAGCAGCATAAAATTCAGAAGTGCATTCAAGGAAAGGTTTCTCAAAGCTTTCCGAATATATTCCCAGTGCAGTAAACATCTTTAAGAGATGGCTTAGTAGTGTCCTATTAACAGCTTCGGCTAACCTGCACGACCAATGACATAAAAGAAAGGTCCAAAGATTCACATGAAAACATTGTCAAATAAATGAATGACTAACAATAGTGCTCATTCGTCTTGATATTTTATTTACAACTAACTATCATTGCTAGACAGGAATAGAGCTCATGGACCATTCAAAAATTACAAACATGATAAAGGTATAGGATAAATAAACCTTGCTTCATATATTACTGAAAGCCTGGAATTGTTACAAGATTACCTTTCTTTTTCAATCATTCTCAAGAGAGCAGTAACAGTCCTCTGCTCAACATCAGGGGACAGAGAAAGATGCTTCCGAAAAAGCTGAAGGCCCATCTCCCACAACGAACGTACATTCGGGTTCTGTATAACATACTTCCTATCCAAAGACAAGGCTATACTCCGGATCATGAGCATCTGGTCACAGAAATCTTGCCAGCATTTCTCAACGAGCGACAAGAAAACAGAGAGATCGGTGTCTTGGCCAACTAAAGAATGTAAAGCGGCAGAGATGTGCTCTTCACACTCCTTCTGCATCCGTTCGTAAAGCTTTCCTTCCAGCTTATGCAAGCAAAGGTCATCAACAGCCTGAATAAAAAAAACAACAATTTCTAATTTCACATACAATACAAACAAGAAGAAACCAAACAAACAAAGAAAGATGGAAAAATTTGGTACCTGGTAAAGCCTCTCGAGGTCGAAAGAAAAGGGCTTTTTGAGGAATATAGCTCTGATAGCTGACTGCAGATTATCCCAGGTAGTGTCTTCAAAGTTTGTTGGTAGAGTTGGTTTGGCTTCAAATATTACAAAATCAAATGATGAAAAATGGTTTTATCCATATCCAGAGCATCTCAAGATTATGCATAACATAGATAACGGATCTGGCTAGAGAAAAGAGATTCAGAAATACATAAACCCTAACCACTCATTAACAAATCAAAATCAGCAATCAAGCTCGATTCAACAGTGAATCCCGATCCAATTCAATCGCAAAACACACAGAGTCTGAACAAATCGCGGGAAGCCTATAGAAAAACCCTAAAATTGAGAAGCCTTACGCTAGACAATCAATCGTTCGGTGCAGAGAGTCATTTTCAATCAATCGAGAGCTTCGATTTACACACTACGCAAACAAAATCCTAAGATCAAATAGATAAAACCTAAGAAACATCAGATTTTACGATCAAAACAATCGCAAATTGATAGGAATCAACCTTTGTTGAGCTTGATGACGAGCTTCTTAGTGGGCTGGGGGAGTGTAGCCTTCTTCCGGGAGAGATTGGCTGCGGCGGAGGGGGTTGGATCTTCGTCCTCCATGGGGAAGGGAACCTTATCGGAGGGAGTGTGGAGGCCGTTTTTGGATTTTTTCATGGGAGGGGAAGAATAAGAAGAGTCGGTGGTGGAGGCTGAGGAAGCGGCTGCGGGGCAAGTAGAGCGTTTGTTTGGAAGAGACATGAAAAATCGGGAGAGAGAGGTGAGGTGAAATCAAGAAGACGAAGCCGAAGGCTTGTCCCAATTTAAGCCTCGTAACCCTTTCTACAAGG
CDS Sequence
- >BnaC09G0238500ZS
ATGTCTCTTCCAAACAAACGCTCTACTTGCCCCGCAGCCGCTTCCTCAGCCTCCACCACCGACTCTTCTTATTCTTCCCCTCCCATGAAAAAATCCAAAAACGGCCTCCACACTCCCTCCGATAAGGTTCCCTTCCCCATGGAGGACGAAGATCCAACCCCCTCCGCCGCAGCCAATCTCTCCCGGAAGAAGGCTACACTCCCCCAGCCCACTAAGAAGCTCGTCATCAAGCTCAACAAAGCCAAACCAACTCTACCAACAAACTTTGAAGACACTACCTGGGATAATCTGCAGTCAGCTATCAGAGCTATATTCCTCAAAAAGCCCTTTTCTTTCGACCTCGAGAGGCTTTACCAGGCTGTTGATGACCTTTGCTTGCATAAGCTGGAAGGAAAGCTTTACGAACGGATGCAGAAGGAGTGTGAAGAGCACATCTCTGCCGCTTTACATTCTTTAGTTGGCCAAGACACCGATCTCTCTGTTTTCTTGTCGCTCGTTGAGAAATGCTGGCAAGATTTCTGTGACCAGATGCTCATGATCCGGAGTATAGCCTTGTCTTTGGATAGGAAGTATGTTATACAGAACCCGAATGTACGTTCGTTGTGGGAGATGGGCCTTCAGCTTTTTCGGAAGCATCTTTCTCTGTCCCCTGATGTTGAGCAGAGGACTGTTACTGCTCTCTTGAGAATGATTGAAAAAGAAAGGTTAGCCGAAGCTGTTAATAGGACACTACTAAGCCATCTCTTAAAGATGTTTACTGCACTGGGAATATATTCGGAAAGCTTTGAGAAACCTTTCCTTGAATGCACTTCTGAATTTTATGCTGCTGAAGCAATGAAATACATGCAGCAATATGACGTTCCCGAGTACCTGAAGCATGTCGAGGGAAGGTTGCATGAAGAGAATGAAAAATGCATACTGTACATAGATGCATCAACCAGGAAACCATTGATATCAACTGTTGAAAAACAACTTCTCGAGCGTCATATAGTTGCTATCCTTGATAAGGGTTTCACACCATTAATGGATGGACGTCGTACTGAGGACCTCCAGAGGATGTACACCCTTTTTTCTAGGGTCACTGCACTTGAATCTATGAGGCAGGCGTTAAGTTCCTACACTCGGAAAACTGGGCAGAAGATCGTTATGGATGAAGAGAAAGATAAAGATATGGTACAATCACTATTGGACTTCAAGGCTTCTCTTGACATAGTATGGGAAGACAGCTTTTGCAAGAATGAATCATTTGGCAACACCATTAAAGATTCATTTGAGCATCTGATAAATCTGCGCCAGAATCGTCCAGCTGAACTTATCGCCAAATTTTTGGACGAGAAGCTCCGTGCTGGGAACAAGGGTACTTCTGAAGAAGAATTGGAGAGTACCCTTGAGAAAGTCTTGGTTTTGTTCAGATTTATCCAGGGTAAAGATGTGTTCGAAGCATTCTATAAAAAGGATCTTGCAAAGAGACTCCTGTTGGGAAAAAGCGCTTCCATTGATGCTGAGAAATCAATGATCTCTAAGCTCAAGACTGAGTGTGGTAGTCAGTTTACAAACAAGCTTGAAGGGATGTTCAAGGATATTGAATTGTCAAAGGAAATCAACGAGTCATTCAAACAATCGTCTCAGGCCAGAACAAAATTGCCATCAGGAATTGAGATGAGTGTCCACGTTCTAACAACAGGGTACTGGCCAACATATCCACCAATGGATGTTAAACTTCCTCATGAGTTAAATGTCTATCAGGATATCTTCAAAGAGTTCTATTTGAGCAAGTACAGTGGGAGGAGGTTAATGTGGCAAAACTCATTAGGTCACTGTGTTTTGAAGGCAGATTTCTCCAAAGGTAAAAAGGAGCTTGCTGTTTCCCTGTTTCAGGCTGTTGTGTTGATGTTATTTAACGATGCAATGAAACTTAGCTTTGAAGACATTAAAGATTCCACTGGCATAGAGGACAAAGAACTGAGAAGGACTCTTCAGTCGCTTGCTTGTGGGAAAGTTCGTGTCCTGCAGAAGTATCCCAAGGGAAGAGATGTACAAGACGGGGATGAATTTGATTTTAATGACACCTTTACCGCTCCTCTGTATCGCATTAAGGTGAATGCAATCCAGATGAAAGAGACGGTAGAAGAGAACACGAGTACAACAGAGAGAGTATTCCAGGACCGACAATACCAGATTGATGCAGCCATTGTTCGAATCATGAAGACGAGAAAAGTCCTGAGCCATACTCTCCTAATCACCGAGCTCTTCCAACAGCTGAAGTTCCCAATAAAACCAGCGGATCTGAAGAAGAGGATAGAAAGCCTGATCGATCGAGAGTACTTGGAGAGGGACAAGACCAACCCTCAGATATATAATTATCTTGCTTAG
Protein Sequence
- >BnaC09G0238500ZS
MSLPNKRSTCPAAASSASTTDSSYSSPPMKKSKNGLHTPSDKVPFPMEDEDPTPSAAANLSRKKATLPQPTKKLVIKLNKAKPTLPTNFEDTTWDNLQSAIRAIFLKKPFSFDLERLYQAVDDLCLHKLEGKLYERMQKECEEHISAALHSLVGQDTDLSVFLSLVEKCWQDFCDQMLMIRSIALSLDRKYVIQNPNVRSLWEMGLQLFRKHLSLSPDVEQRTVTALLRMIEKERLAEAVNRTLLSHLLKMFTALGIYSESFEKPFLECTSEFYAAEAMKYMQQYDVPEYLKHVEGRLHEENEKCILYIDASTRKPLISTVEKQLLERHIVAILDKGFTPLMDGRRTEDLQRMYTLFSRVTALESMRQALSSYTRKTGQKIVMDEEKDKDMVQSLLDFKASLDIVWEDSFCKNESFGNTIKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELESTLEKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFSKGKKELAVSLFQAVVLMLFNDAMKLSFEDIKDSTGIEDKELRRTLQSLACGKVRVLQKYPKGRDVQDGDEFDFNDTFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKTNPQIYNYLA