Information report for BnaC08G0236200ZS
Gene Details
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Functional Annotation
- Encodes SR45, a member of the highly conserved family of serine/arginine-rich (SR) proteins, which play key roles in pre-mRNA splicing and other aspects of RNA metabolism. SR45 is a spliceosome protein, interacts with SR33 and the U1-70K protein of the U1 snRNP. Also involved in plant sugar response. sr45-1 mutation confers hypersensitivity to glucose during early seedling growth.
Homologous
- Brassica oleracea: Bo8g066720
- Glycine max: Glyma.08G172000, Glyma.15G255400
- Juglans regia: Jr09_00760, Jr09_00770
- Manihot esculenta: MANES_06G171800, MANES_14G016200
- Populus trichocarpa: POPTR_011G143100v3
- Prunus persica: PRUPE_4G139800
- Solanum lycopersicum: Solyc10g005590.3
- Solanum tuberosum: PGSC0003DMG400011240
- Vitis vinifera: VIT_19s0027g00590
Gene Resources
- Pfam: PF00076
Sequences
gDNA Sequence
- >BnaC08G0236200ZS
TTTCGCTTGTTCGTCGCGATTATCGCCCATGGCGAAACCAAGCCGTGGCCGTCGTTCGCCTTCCGTCTCCGGGTCTTCATCTCGGTCCAGCTCCAGATCTCGTTCGAGTGGGTCCAGGTCTCTTTCCCGTTCGAGATCGCTCTCTTCTTCTTCGTCTCCTTCGCGGAGCGTCAGTTCAGGGAGTCGTAGTCCTCCACCCCGTGGAAAAAGGTTAGTGCCTTCTTTCGATTTGGTAATTTGGGTCTGCTAAGAAGTGGGTTGGATCCAAAATCTGGAATTGGAGACTGTTGGCATTGAACATATTTTTTTTATTGGTAATAGCTTATTCGTAGTGTGAGGTGAATTGTTGTGATCTATCTTTACAGTTCTTCTGGGCCTGCTAGGCGAGATCGCTCTCCGCTTCTTCCTCCACAGTCTAAAGGAGCCTCTTCACCCTCTAAGTAATCTCCCCACTCATAACTCTTGCACATATTCTTGTTTAGAATGTCAATTGTGTGTGTGTGTGTGTGTGTGCGCGTTGCGAGTTGAGGTTTAGTTGGAAAAAGTGCAATTACATTAGACACTGGTGTTACCGTTTTAACAAATTGGTAGTGCTATTGTGTTGGTATCTCTGCTTGAGAGTCTTGAGTGTTTTAATACTTTCGTAACATCCTAACTTTTTGCTGATTTTACAATCGAATTCTAATTTCAGGAAAGCCGCACCTATTCAAGAATCTCTTGTTCTCCATGTTGATTCTCTTAGCAGGAATGTGAATGAAGGCCATCTCAAAGAAATATTTGGTATGTTGATTGCTCTTCCCATATCCCTTCTTCTTGTTCTGATTTCACTACATGAACTAAGATTAGTATTATATAGGTCATAGCTTCCATGGATCATCACTGGCATTATGGTTTTTGTATTTTGTTTCGTTTGACCAATTTGCTTGGCGTTATGTTTAAGTCTTCACACTGTGTGTTAGTAATGGGCTTTTTGTCGTGTTTTTAGGCAACTATGGTGAAGTTGTACACGTGGAACTTGCGATGGATCGAGCTGTAAGTTTCTCTTTCGGTGTTCTCTGTTGTTTTATGTGATTACTTGTTAAGATTTTTTTTTTCTTAATTTCTTTGCATATTAACAGGTTAATCTTCCAAAAGGATATGCTTATGTTGAGTTCAAGGCAAGAGGTGATGCTGAGAAAGCTCTGCTGTTTATGGATGGTGTATGTCTCTTCCCAAATATGAAATGCACTATGTTATTAGCTCAACATATTGTCTGAGAAGATTTATGCATGCTTTTTTGTTTCCTTACCGCAGGGCCAAATTGATGGAAACGTTGTTAAAGCCAAGTTCACACTACCACCGCGTCAGAAACTATCTCCACCCCCTAAACCTGTCTCAACTGCACCAAAGAGAGAGGCTCCAAAATCTGATAGTGCCGGTGCTGACATTGAGATAGATGGGCCCGGGCGCCCAAGAGAGAGTACGTCTATGTTTATATTTTTTTGTTATTGCTGTGATATATGCTTTATATGGTGTCAATGATTATCATCAATATGTGATTAGCTTCTCCAAGAAGGCGATCACCACTACCTAGGAGAGGCGCGTCACCTAGGAGGTTACCTGATTCTTCCCCTCGCCGAAGGCCGAGCCCTCCTATCCGCCGTCGTGGTGATACACCACCCAGACGCAGGGCAGCATCGCCACCTAGAGGCCGTTCTCCATCTTCTCCACCTCCAAGAAGACAGAGATCTCCTCCAAGGTTAGCTGAAGTGGTACCATCTGTTTTATGTGGTGTTTTCTTTTTTTCTTTTTTTTGAATGAATGTTAAATTTATTCAAAAAAGCCTGTTTACACCAAATGCATACATATGTTTAGCTATACACAGAAAAGTCTACTCAAAATATGTGGTGTTTTCAGAATCAATTGCTCACGTTTTATATGTCAACAGGGGCTCCCCTAGAAGAATCCGCGGCAGTCCTGTTCGAAGACGGTCTCCTCCTCCTCTAAGGCGAAGGTAAGTCTATGCCATTTCACAAAGTATCCCCCTAGTGATTGGAGGATAGGAATTACTTCTTTGTTAGGCTATCGTACTCAGGACGTTAGACCTGAAACATGTCTGTTTTGTCTTTGAATTGGACGTGTTTCAGGTCACCTCCAAGGAGACTACGCAGTCCTCTCAGAAGATCTCCAATCCGCAGACGTAGCCGATCCCCAATTCGTAGGCCTGTTCGCTCTCGTTCAAGGTCCATCTCACCCCGCAGGTATGTTTTAGCCGCTTTAAAAGTGTTATTAGGGTAGTTGATATCTCCGGGATTTTAGTTACCTGCAGTGGTATGGCTGAGATAGTACATATGATGATACAAGTGTCATGACATGTTTTTCAATCTTGCATAATTTACGTGCATACTTAAAGTTACTACATTGTGTTATCCTTGTATCTCGGTTTGTGACAAACTGATGCCAAATATGACTTAAGTTATATAGATCTATGTGGAGTCTCTGTTAGTGGTGTAAAATTTGTCTTTGATTGTATGCAGGGGACGAGGTCCAGCTGGGAGACGTGGAAGGTCATCTTCTTCTTACTCTAGTTCGCCAAGTCCCAGAAGGGTAAGTATCTGATGCGGATCGCTTTTTAGCTATAAAATTGTTGATGACTTGTTGAGTTAGTTGTTTTGATTTCTAACCTGTGTGGATTATTAAAACTAACAGATTCCTAGGAAGATTTCGAGGAGCCGCAGTCCTAAGAGGTAAAACACTTTCTTTGCTTAACACTAGTCCTCATCTTAAAGCTGGAAACACTGTAGTCTGTAGCATGCAGTAGTGTAAAAATGCTCCACTGCTAAGTTATGTGTAGTTAATGTGATTGTGATGAAACAAAGACCAGAAGAATTGGTTCAAACATTATGTAAATCTTTTAGCTCTCAAAGTCTAATTACAGAGAATGAGTTCGTTGTTGCGTAATGTGTAGGCCACTGAGAGGAAAAAGAAGCAGCAGTAACAGCAGTAGCAGCAGCTCACCGCCTTCTCGCAAAACATAACAATGTAATAAAAAAACATATTATCTCTCGGCTGAAGTTTTGCCAGTCAAATGAGAGTTGTGGCTTTTGTAGTTTTTATAGTTTTGGATCTTTTAAGCATATTTTATGCATCTCCAGCGATAGAACTGATTTGAATTTCAGTATAGTCTTATGAGTTAA
CDS Sequence
- >BnaC08G0236200ZS
ATGGCGAAACCAAGCCGTGGCCGTCGTTCGCCTTCCGTCTCCGGGTCTTCATCTCGGTCCAGCTCCAGATCTCGTTCGAGTGGGTCCAGGTCTCTTTCCCGTTCGAGATCGCTCTCTTCTTCTTCGTCTCCTTCGCGGAGCGTCAGTTCAGGGAGTCGTAGTCCTCCACCCCGTGGAAAAAGTTCTTCTGGGCCTGCTAGGCGAGATCGCTCTCCGCTTCTTCCTCCACAGTCTAAAGGAGCCTCTTCACCCTCTAAGAAAGCCGCACCTATTCAAGAATCTCTTGTTCTCCATGTTGATTCTCTTAGCAGGAATGTGAATGAAGGCCATCTCAAAGAAATATTTGGCAACTATGGTGAAGTTGTACACGTGGAACTTGCGATGGATCGAGCTGTTAATCTTCCAAAAGGATATGCTTATGTTGAGTTCAAGGCAAGAGGTGATGCTGAGAAAGCTCTGCTGTTTATGGATGGTGGCCAAATTGATGGAAACGTTGTTAAAGCCAAGTTCACACTACCACCGCGTCAGAAACTATCTCCACCCCCTAAACCTGTCTCAACTGCACCAAAGAGAGAGGCTCCAAAATCTGATAGTGCCGGTGCTGACATTGAGATAGATGGGCCCGGGCGCCCAAGAGAGACTTCTCCAAGAAGGCGATCACCACTACCTAGGAGAGGCGCGTCACCTAGGAGGTTACCTGATTCTTCCCCTCGCCGAAGGCCGAGCCCTCCTATCCGCCGTCGTGGTGATACACCACCCAGACGCAGGGCAGCATCGCCACCTAGAGGCCGTTCTCCATCTTCTCCACCTCCAAGAAGACAGAGATCTCCTCCAAGGGGCTCCCCTAGAAGAATCCGCGGCAGTCCTGTTCGAAGACGGTCTCCTCCTCCTCTAAGGCGAAGGTCACCTCCAAGGAGACTACGCAGTCCTCTCAGAAGATCTCCAATCCGCAGACGTAGCCGATCCCCAATTCGTAGGCCTGTTCGCTCTCGTTCAAGGTCCATCTCACCCCGCAGGGGACGAGGTCCAGCTGGGAGACGTGGAAGGTCATCTTCTTCTTACTCTAGTTCGCCAAGTCCCAGAAGGATTCCTAGGAAGATTTCGAGGAGCCGCAGTCCTAAGAGGCCACTGAGAGGAAAAAGAAGCAGCAGTAACAGCAGTAGCAGCAGCTCACCGCCTTCTCGCAAAACATAA
Protein Sequence
- >BnaC08G0236200ZS
MAKPSRGRRSPSVSGSSSRSSSRSRSSGSRSLSRSRSLSSSSSPSRSVSSGSRSPPPRGKSSSGPARRDRSPLLPPQSKGASSPSKKAAPIQESLVLHVDSLSRNVNEGHLKEIFGNYGEVVHVELAMDRAVNLPKGYAYVEFKARGDAEKALLFMDGGQIDGNVVKAKFTLPPRQKLSPPPKPVSTAPKREAPKSDSAGADIEIDGPGRPRETSPRRRSPLPRRGASPRRLPDSSPRRRPSPPIRRRGDTPPRRRAASPPRGRSPSSPPPRRQRSPPRGSPRRIRGSPVRRRSPPPLRRRSPPRRLRSPLRRSPIRRRSRSPIRRPVRSRSRSISPRRGRGPAGRRGRSSSSYSSSPSPRRIPRKISRSRSPKRPLRGKRSSSNSSSSSSPPSRKT