Information report for BnaC08G0165400ZS
Gene Details
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Functional Annotation
- Encodes a MADS-box transcription factor involved in floral transition.
Homologous
- Brassica oleracea: XP_013605259.1, Bo8g050720, XP_013605260.1, XP_013596747.1, XP_013596745.1, XP_013596744.1, XP_013591928.1
- Brassica rapa: XP_009109212.1, XP_009109211.1, XP_009139222.1
- Raphanus raphanistrum: RrC338_p4
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: A0A078JHN0
- EMBL: LK035044
- AlphaFoldDB: A0A078JHN0
- OMA: EKYARCS
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS50066 , PS51297
- Gene3D: 3.40.1810.10
- OrthoDB: A0A078JHN0
- SMR: A0A078JHN0
- CDD: cd00265
Sequences
gDNA Sequence
- >BnaC08G0165400ZS
TACACTCGACTTTGAGGCAATCCGATGGACAAGTCAGTTTCCACATCCGACAAGTTCATGTTTCCACAATTACAGGAAGGTGCACTCTTCTCACTCTCTAGGCTCCTTGACTGAATACACAAGGGGTGTTCTTCAAACTGAAATGATAACATATTATTTTCCAAAAATTCCATGGAAGAAACAAACTCAATTTTTAAAGATGCATGTCCTTGATTTATATATATGTGTGTACCATTTGGCGCAGGCTGCTTTTCTCGTTCAAGACCTCTCTCTGTGCTACAATCTAATAAAGTGAAATTAACAAAATTCACAAGGAAACTTAGAAATAAAACTGGCCAGTTTAAGAAAAAATCTTAGAAAAAAAACTCCCTTGAAAATAATAAAATTAATTAGTAATAGTACCTCTGCTTTTAGTTTCTCTATTTTATCTTCATTTAACTTAGTCTGCCAAAATCGAAAAATGCGGATACCACATTATGACAACTATATAATTACGACTGTAATTTTTTTATAACGCTGATTTATTATGACATTATATTTATGAGAAATATTACATAAACGATTCGACCACCGACAATACTACTTGCCTTATGAAGATCTACGCCTAACTGCATAATTACAACTGCATGAGAATAAAGTTTTATTTCTCTCCATATTAATTATATACTCAGTGAATTTATACCTTCCTTGATCTGACAATAGTAAGACTTTTCTCAATTTTGGTAGTTATCTCCTTGAGTTCCTCCACCGAACACGAATACAAATCTTGCCCCATCAGCTTCCTTGAGATGTTATCCGAGTGTGTATATATATAATCATATATTGCATTTCAAGAAAACATATATATGCAATATATAGAAAGATCAGAATATTACCGGCAATGAAGTTGAAGAAGTTTAATCTTGTCCATCGTTATCGCCATTTCGTTCTTGAGCTCTTGCACATATTGCTGTTTTTGGAGTCTCTGTGCTCCAAAATACTCACCCCTATGTATCTCACATATCTCTATCATCTTCTGCATGCTGTATACATTTCCAAGAACCTCTTCAGTATTATTTATTATAATATATATAATTCATTTTGAAATACTTATATACCATGATCAACAAGAGCATTCAGAGCATTCACACATATTCAACATTCATGTTTGTTCTAACCTGAAAAAGTTATTCAAGCATCAAGTCATATGTCCTAGTAAATCAAATACATGTTTCTAGCCACGCCTATCTCATGGCTACTGAGTAGTAATGTACATATATAAGCATGAAATATTTCCCAAGCATGCATCGTAATGTACATGTTTAATATGTTTTTCGACCTAACGGGATGAGAATGCTAAACATCTGAGAGATACCAAAGTGTAAATATGCATCTTTTAATTTGCATGACTTGGCTTCCTATTTATACTCACCAGTGATACTTATAGACTCGCCTTTTTAACTATTAACAGTTTTATTTTGCTTAAATGGTCAAAATCAATTAGTAAGCTCGTAATTATCATTGACACTAACATTTGTAAAAGAATATTTTTTTGGTTGCCATCTAACCTCACTCAAATGTAGTTATTGGTAATTGCTAAAATGGAAGGAAAAATCATTAGTAGTAACGGTTAATTTAACCAAGAGGCATAATATATGGCTTGGCATAGTGATCAATGTTGAGGTTTGATAATCATTTGTTGCACACTTGATCAACATGGCATCATATCACAACTTTATTACTTTCGGTTAGTTTGAATTTGGTGCAAGAAATTCACTTATCCCTGAAAGATCAACACACTCAAGAATCCCAAACTGTCTAGGGCTGAAGTTTGGACCTTTTTTTTTTTTTTGAAAAAACTGAAGTTTGGACCTTGACACAAAGCAACAAGATATTGTCTCATACATCATGTAGTTTGCTATTCATAAAACGGTTAATTGTACTCTTCAGGTATTTATTTTTATGACATGATCACTGAGCTTTTCTTATATACTGTATTATAATAACGTGCCAAGTGGTTTCAGCATGAGAGTTCCAATGTATACTAGGTTCAAAGTTCGAGAACGCTTTGGGAAAACCCTAAATCACTTGCTCGTGCTTGAAGAAGAACTTGATGCAAGTTACAAACACATTTGGTCAATTAATTGATTAGGTTTTAATTAAGAAATACAATTCCGTGGTACTTTAAAGAAGCCATATGCCTAATTAAAGAAAATCAAAGCAATTTCAAAGGGAATATTTTGGGGAAATTAAACTCAACTAAATGTTTAGAAATCTCTAGCTAGTACAAACAATCTTACCTAAGTAATTAAGAGCTTAACATCACAAATAATGGTATGTATACTAATGAGTATTGGATCAAAAGGTTAAGTGAGAGGTACTTACTCGGAGCTAGCGAAATCATATAATCTTCCTTTCTGAGAGAAGACAATGGCTGCTACTTGAGCATCACATAGAACTGAAAGCTCGTGAGCCTTCTTCAAGAGACCTTTCCTACGCTTGGAAAACGTGACTTGTCTGCTGGTCACGTCCTCGATTCTTTTGATTTCGATCTTCCCTCTCACCAT
CDS Sequence
- >BnaC08G0165400ZS
ATGGTGAGAGGGAAGATCGAAATCAAAAGAATCGAGGACGTGACCAGCAGACAAGTCACGTTTTCCAAGCGTAGGAAAGGTCTCTTGAAGAAGGCTCACGAGCTTTCAGTTCTATGTGATGCTCAAGTAGCAGCCATTGTCTTCTCTCAGAAAGGAAGATTATATGATTTCGCTAGCTCCGACATGCAGAAGATGATAGAGATATGTGAGATACATAGGGGTGAGTATTTTGGAGCACAGAGACTCCAAAAACAGCAATATGTGCAAGAGCTCAAGAACGAAATGGCGATAACGATGGACAAGATTAAACTTCTTCAACTTCATTGCCGGAAGCTGATGGGGCAAGATTTGTATTCGTGTTCGGTGGAGGAACTCAAGGAGATAACTACCAAAATTGAGAAAAGTCTTACTATTGTCAGATCAAGGAAGACTAAGTTAAATGAAGATAAAATAGAGAAACTAAAAGCAGAGATTGTAGCACAGAGAGAGGTCTTGAACGAGAAAAGCAGCCTGCGCCAAATGTTTGAAGAACACCCCTTGTGTATTCAGTCAAGGAGCCTAGAGAGTGAGAAGAGTGCACCTTCCTGTAATTGTGGAAACATGAACTTGTCGGATGTGGAAACTGACTTGTCCATCGGATTGCCTCAAAGTCGAGTGTAA
Protein Sequence
- >BnaC08G0165400ZS
MVRGKIEIKRIEDVTSRQVTFSKRRKGLLKKAHELSVLCDAQVAAIVFSQKGRLYDFASSDMQKMIEICEIHRGEYFGAQRLQKQQYVQELKNEMAITMDKIKLLQLHCRKLMGQDLYSCSVEELKEITTKIEKSLTIVRSRKTKLNEDKIEKLKAEIVAQREVLNEKSSLRQMFEEHPLCIQSRSLESEKSAPSCNCGNMNLSDVETDLSIGLPQSRV