Information report for BnaC06G0250300ZS
Gene Details
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Functional Annotation
- Encodes a 237-kDA protein with similarity to vertebrate Tpr, a long coiled-coil proteins of nuclear pore inner basket filaments. It is localized to the inner surface of the nuclear envelope and is a component of the nuclear pore-associated steps of sumoylation and mRNA export in plants. Mutations affect flowering time regulation and other developmental processes. Probably acts in the same pathway as ESD4 in affecting flowering time, vegetative and inflorescence development.
Homologous
- Brassica oleracea: Bo6g081090, Bo6g123740
- Brassica rapa: Bra003614, Bra035105
- Gossypium hirsutum: Gohir.D01G085300
- Juglans regia: Jr06_11960, Jr06_11950, Jr06_11970, Jr15_08850
- Manihot esculenta: MANES_16G052800
- Prunus avium: Pav_sc0007253.1_g130.1.mk
- Prunus persica: PRUPE_4G125000
- Vitis vinifera: VIT_19s0085g01090
Gene Resources
- Pfam: PF07926
Sequences
gDNA Sequence
- >BnaC06G0250300ZS
TGCCCTTGTTTATGCCAGACGATGAGCTTGCGCGGCTATCAAACGACGCCGCGTCGGTGGTTGCAGAGAGAGCCGACGAGTACATCCGGAAGCTGTACGCCGAGTTGGACAGTGTACGTGCCAAGGCCGATGCTGCTTCCATCACGGCGGAGCAGACGTGCTCGCTTCTCGAGCAGAAGTACCTCTCGCTCTCTCAGGATTTCGCGTCGCTTGAATCTCAGCATGCGAAGCTTCAGTCTGATCTCGATGATCGGTTATCTGAGCTCGCACAGTCTCAGGCGCAGAAGCACCAGCTTCATTTGCAATCGGTACGTTCTTGTGCTTTAAGCTTTTGTGTTGAGTTTTGAGCGTGTTTTTGGGATTTGATTGGGATACTTGTTTGATTGCAGATTGAGAAGGATGGAGAGTTAGAGAGGATGACGACGGAGATGTCAGAGCTGCATAAGTCCAAGAGGCAACTGATGGAGTTGCTGGAGCAGAAAGATTCTGAGATTAGCGAGAAGAACTCTAATATCAAGAGCTATTTGGAGAAGATTGTGAGTGATGCTGCTTCCATAACTTTGTTGCTAATAAAGGAGGGATTGATTTCTTATTGTGTTTATCAGGTTAAGCTGACTGACGCTAGTTCGGAAAAGGAGTCTAGATTTGCTGAAGCAAGCGCTGAATTGGCACGTTCGCAAGCTATGTGCTTTCGTTTGTCTCAGGAGAAAGAGCTTATGGAAAGGCATACTAAATGGCTTGATGAGGAGTTAACATCTAAACTTGATAGTTATGCTGAACTCCGTAGGAGGCATTCTGATCTCGAGGCTGAAATGTCGGCGAAGCTTGTGGACGTAAGACTAATTTCAGTAGCTTATTCTATTGCTTCTGCTCTTTTCTTTTCTGAAATACAGTTTTTAGTTACTTGAGTGCCATGTCATACTCTGTCAGGTTGAGAAAAATTATAATGAATGCTCTAGTTCGTTGAATTGGCATAAGGAAAGATTGAGAGAGCTCGAAACGAAGATTACTTCATTACAAGAGGTATGCATGTCATAAAGCATTTGTCCTCTTTGTAGCACTTCTCTTCATTGTATCTTATATTTACTTATTTTTCTTCATTTTAAAAGGAACTCAGCTCGTGCAAAGATGCAGCAACGACGACTGAAGAGCAATACAGTGCTGAACTTCTCACTGTGAGTTGTCAAAGATTGTGCAGATTTTCTTCATTTCACATTTCAGAGAAAAGATCTCCCTAGTTGTTGTTTAGTTCAATCTAATCCATTACTTGGGTGCTGGCATAGGCAAACAAGCTTGTTGAGCTGTACAAGGAAAGTTCGGAGGAATGGTCTAGAAAGGCTGGGGAACTTGAGGGTGTCATTAAGGCCTTAGAGGTAAGCTTGCTGTCAAAATTCAGAGGAAACTGATCGTATCTTGTATCTGTATGTTCGCCTGTTGAGTTCACATTATGACTAATCAGGCACGCTTGAGCCAAGTCGAGAGTGGGTATAAACATAGACTTGAGAAAGAAATGTCTACGAACCAGAAGTTGGAGAAGGTAATAAGTTCCCTGACTTCTACAGTTCTACTGCGTTATCGTTATTTATAACATCAGGTGCTTAGCTCTGGTGACTCGTTAGGTGGCATCCCTTACTACTTATATTGAGGGGGTTGCATGTGTGAAAAATTGCTGCTAGGGTATCGCGGCACTCAACCTTATAATCAGATATGATACCTTGAGTATACTATGATTGTTTTCTAAAATAAATTAGTTCGTCCTGTCTTTATGAGGAGCATAAGTACCCATAATCTTTATGATTTTAGTAGGTTTTCTTGCGAAATTCTTTCGTCAGTTTTTGATTACTGGGAAGTGGTTTCGGTGAATGGTATACCTTTTGGATCTACGAGTTCTTTTTTGGTGCAATTTTTTATTTATTTGCGAAACAGATGGTTACTTTTTGTGGTCTTCAACTTCAGGAGAACGAAGACATTAAACAAAAACTTGAGAAGTGTGAAGCAGAAATTGAGAAAACTCGAAAAACAGATGAGCTAACGCTTATACCTTTCAGCAGTTTCACAAGGTATGACTCTTCTGCGAACAAGAAATTGTTCATTTTTGTCAGAACTTTGTACAGCCACGCAAAAACATGGTATATTTGCTTTTTATGGGTACTCTTGCCACTCTGGTTTGCTATACTTGCTTATCAAATTGAGTTAAAAACAAGTAGAAGTAGGGATTAGTGATGTTGGTTGCTTTAAAAAATGCACTTCCAATACAGATTTATAGTTTTCACCTGTTATCCTTTCCTACCAACATGTCTGTCCTTTGACCAAAATATAAGGGCCACAAGTTTTATTGGTTTCTAGCTGTTTCGAGAAATTTTAAAATAGTTAAACTTTAGAGACTTTTATTGGGTTTACAATGAGCGAATTAAGAGTGTTTAAGCCATGAATTAGATCATAGTGGTTGTGAAATATGGTTTTTGATTGCCCTAGTGGCTAGTGCTCATGGAACAATAAAATCCTTACAATGTATCTTTTGAAAATCCTTTGCTCCAGAGGGGTTGACATTTCTGGGACCAGCAACATGATAGTGGAAAGCCATGAAATAATTTCCAAGGTTCCTGCTGGTGTGTCAGGAACAGCACTGGCAGCTTCACTCCTACGTGACGGATGGAGTGTGAGTTTCAGTCTTACTATATTAGTTCAGTTCATCAGCTTCTCAACTTTATTGTTGGTGTGTATATATATATATATTTTTTTTTTTTGTAGCTGACCAAAATTTATGAGAAGTATCAAGAGGCTGTTGATGCTATGAGGCATGAGCAATTAGGTCGAAAGGAAGCGGAGTTGATACTACAACGGGTATGAACTAATTGACCTTTGAGTTTAGATGCTGATCTTATCTAGTTTTGTCTTTTTTTTTGTCTGTGTTTCGTTTCTACTTTTCCAACTTTAGTTCACTTTTCTTTTCCTGTAAACTTATGCAAGACTCTTGGGCTTGTTGGGTAAAAACCTGATGGAAACATTTTAGGTTTCCTTCTCGTCATAGCAGCGTGTCTGGATTTGATCTGTTTGCTAAAGTGCTGGCCTTGAATCCTGCTTTTTAGGTTTTATCCGAACTAGAAGAGAAAGCTGGGTTCATCCAAGAGGAAAGAGGTATGATTCAATTCTGTGCTCCCAAAGATTTCTATCATTTGTGCAGTTTTTTTGTCTTATTTGAGATATCATGCTTAAACCTATATTTTGGACAATCTGTTTTCTGTTTCCAGGTGAGCATGAGCGTTTGGTTGAAGCTTACTCTCTAGTCAGTCAAAAACTTCAGGATTCTGTCTCTGAACAATCAAATATGGAGAAAGTCATCATGGAGCTAAAGGTACTTGGTATTATCATACTAGCTGTCTAAGATGCATATTTGTGCCGTTCTTATACATTTATTTTATTGATAGGCTGACTTGAGGAGGCGGGAACGTGAAAATATTCTGTATCAGAAAGATATATCTGACCTACAGAAGCAGGTAATTTGACAATCTATTCTCCTTTGTTCACCAGGTTATGATTTTATCTGCATGTTTGTTGTGGTCTTAAGTTTCTTGACTTCTATGATTTGCAATAAATAGGTCAAATTTTAGCTCACAGATATATGACTAGCTGGTTGCCTAATCAACTGCTGCTTTGTTGTATACATGATTTAGGTAACGATACTACTGAAGGAGTGTCGTGATGTCCAACTTCGCTGTGGAGCTGCCGGGGATGAGGAAGAAGATGATACTCAGCTTTCTGATGTTGAGATGGATATGGAATCTGAAGCTGATAAAATAATTTCAGAGCATCTTGTAAGTTTATTTCTTTTCTTGAAGTCATGTTTTGTGTTAGATTTTACATGCGAAATAATTTGTGGATGACTAATGCTTGTCCTCTTGTTTGGATGAATCTCAGTTGAAGTTTAAAGATATAAATGGATTAGTTGAGCAGAATGTTAAGCTCAGGAATCTTGTTCGTAGTCTCTCAGAGCAGATTGAAAGTAGGGAAACGGAGCTGAAGGTATGACGGGTTTTTTTCCAGTTTTTGCTTCGGTAGAACTAAGGTTTTAAATGAACATTTGGAATATCAGGAGAAGTATGAGATAGACCTGAAGAAAAAGACTGATGAAGCTTCTTCCAAAGTAGCCATCGTGCTAGAAAGAGCCGAAGACCAGGGTAAAATGATTGAATCACTGCACGCATCTGTAAGTCCTTCCACCCTTCAGCTCTCTTCTCCATTGCAACACTTGCTTAGATGATCTTGGATTTCAGCTCAGTGATTTATCTTGTACATTGTTCTTTTCAGGTTGCAATGTATAAACGACTATATGAAGAGGAACAGAAACTTCATTCATCTAATTCTCTTTCTTCAGATCCGCCTCCAGGTTCGAGCTCTCTATAGTGACTATCATTGGCTAAGTTTAATTAAATGATTTTAGTTTAATCTTACCATTCCAAATGGTTGAGTAGGAATGCAAGTAATATTGATGTAGTTGGTCCAGATCTCAAATTCAAACAAAAAAGTTTGCTCGTTATCTTTTTTTTTTAAATAAATAATTAGGTTAGGAAGCATCTTGATTTTTTTAAATAACTACCAAGTTTTTAAGGTTGGGTAAGCTCTGAATTTTTAAAGTTCGCTCGTTATGCTTTACCTAGTTTCATATGTCCCAACTATCACTGGCGAAAATCAATGCTGTATTTTTAAAACAAATTTCAATTGAACTCTGGCTTTTGAGCATAATTAGCTTTCTTGAAAAGTAAAGAAGCTTCACAGGCTGTTGCTTGCTTTTCTCATAAATTAGAATACATAATTCAGTAGTATTAGCTTTACAATGGCGTGACTGAGATGTATTTTGTTAGATGTAGTGCAGGAAGGAAGAACTTCTTACATCTGCTTGAGGATTCGCAGGTGTGATAGATTTCTAAATCTTTCTAACTCTTCTTTCTTCTTTCTTCTATCTCTCTTTTGTTGCATCAATGTAGTTGTTTGAGACTCATTTGTGGTCTTGATTGCTTGCTCCAGGAAGCTACTAAGAGAGCCCAAGAAAAAACATTTGAACGCATTCGAAGTCTGGAAGAAGATTTAG
CDS Sequence
- >BnaC06G0250300ZS
ATGCCCTTGTTTATGCCAGACGATGAGCTTGCGCGGCTATCAAACGACGCCGCGTCGGTGGTTGCAGAGAGAGCCGACGAGTACATCCGGAAGCTGTACGCCGAGTTGGACAGTGTACGTGCCAAGGCCGATGCTGCTTCCATCACGGCGGAGCAGACGTGCTCGCTTCTCGAGCAGAAGTACCTCTCGCTCTCTCAGGATTTCGCGTCGCTTGAATCTCAGCATGCGAAGCTTCAGTCTGATCTCGATGATCGGTTATCTGAGCTCGCACAGTCTCAGGCGCAGAAGCACCAGCTTCATTTGCAATCGATTGAGAAGGATGGAGAGTTAGAGAGGATGACGACGGAGATGTCAGAGCTGCATAAGTCCAAGAGGCAACTGATGGAGTTGCTGGAGCAGAAAGATTCTGAGATTAGCGAGAAGAACTCTAATATCAAGAGCTATTTGGAGAAGATTGTTAAGCTGACTGACGCTAGTTCGGAAAAGGAGTCTAGATTTGCTGAAGCAAGCGCTGAATTGGCACGTTCGCAAGCTATGTGCTTTCGTTTGTCTCAGGAGAAAGAGCTTATGGAAAGGCATACTAAATGGCTTGATGAGGAGTTAACATCTAAACTTGATAGTTATGCTGAACTCCGTAGGAGGCATTCTGATCTCGAGGCTGAAATGTCGGCGAAGCTTGTGGACGTTGAGAAAAATTATAATGAATGCTCTAGTTCGTTGAATTGGCATAAGGAAAGATTGAGAGAGCTCGAAACGAAGATTACTTCATTACAAGAGGAACTCAGCTCGTGCAAAGATGCAGCAACGACGACTGAAGAGCAATACAGTGCTGAACTTCTCACTGCAAACAAGCTTGTTGAGCTGTACAAGGAAAGTTCGGAGGAATGGTCTAGAAAGGCTGGGGAACTTGAGGGTGTCATTAAGGCCTTAGAGGCACGCTTGAGCCAAGTCGAGAGTGGGTATAAACATAGACTTGAGAAAGAAATGTCTACGAACCAGAAGTTGGAGAAGGAGAACGAAGACATTAAACAAAAACTTGAGAAGTGTGAAGCAGAAATTGAGAAAACTCGAAAAACAGATGAGCTAACGCTTATACCTTTCAGCAGTTTCACAAGAGGGGTTGACATTTCTGGGACCAGCAACATGATAGTGGAAAGCCATGAAATAATTTCCAAGGTTCCTGCTGGTGTGTCAGGAACAGCACTGGCAGCTTCACTCCTACGTGACGGATGGAGTCTGACCAAAATTTATGAGAAGTATCAAGAGGCTGTTGATGCTATGAGGCATGAGCAATTAGGTCGAAAGGAAGCGGAGTTGATACTACAACGGGTTTTATCCGAACTAGAAGAGAAAGCTGGGTTCATCCAAGAGGAAAGAGGTGAGCATGAGCGTTTGGTTGAAGCTTACTCTCTAGTCAGTCAAAAACTTCAGGATTCTGTCTCTGAACAATCAAATATGGAGAAAGTCATCATGGAGCTAAAGGCTGACTTGAGGAGGCGGGAACGTGAAAATATTCTGTATCAGAAAGATATATCTGACCTACAGAAGCAGGTAACGATACTACTGAAGGAGTGTCGTGATGTCCAACTTCGCTGTGGAGCTGCCGGGGATGAGGAAGAAGATGATACTCAGCTTTCTGATGTTGAGATGGATATGGAATCTGAAGCTGATAAAATAATTTCAGAGCATCTTTTGAAGTTTAAAGATATAAATGGATTAGTTGAGCAGAATGTTAAGCTCAGGAATCTTGTTCGTAGTCTCTCAGAGCAGATTGAAAGTAGGGAAACGGAGCTGAAGGAGAAGTATGAGATAGACCTGAAGAAAAAGACTGATGAAGCTTCTTCCAAAGTAGCCATCGTGCTAGAAAGAGCCGAAGACCAGGGTAAAATGATTGAATCACTGCACGCATCTGTTGCAATGTATAAACGACTATATGAAGAGGAACAGAAACTTCATTCATCTAATTCTCTTTCTTCAGATCCGCCTCCAGATGTAGTGCAGGAAGGAAGAACTTCTTACATCTGCTTGAGGATTCGCAGGAAGCTACTAAGAGAGCCCAAGAAAAAACATTTGAACGCATTCGAAGTCTGGAAGAAGATTTAG
Protein Sequence
- >BnaC06G0250300ZS
MPLFMPDDELARLSNDAASVVAERADEYIRKLYAELDSVRAKADAASITAEQTCSLLEQKYLSLSQDFASLESQHAKLQSDLDDRLSELAQSQAQKHQLHLQSIEKDGELERMTTEMSELHKSKRQLMELLEQKDSEISEKNSNIKSYLEKIVKLTDASSEKESRFAEASAELARSQAMCFRLSQEKELMERHTKWLDEELTSKLDSYAELRRRHSDLEAEMSAKLVDVEKNYNECSSSLNWHKERLRELETKITSLQEELSSCKDAATTTEEQYSAELLTANKLVELYKESSEEWSRKAGELEGVIKALEARLSQVESGYKHRLEKEMSTNQKLEKENEDIKQKLEKCEAEIEKTRKTDELTLIPFSSFTRGVDISGTSNMIVESHEIISKVPAGVSGTALAASLLRDGWSLTKIYEKYQEAVDAMRHEQLGRKEAELILQRVLSELEEKAGFIQEERGEHERLVEAYSLVSQKLQDSVSEQSNMEKVIMELKADLRRRERENILYQKDISDLQKQVTILLKECRDVQLRCGAAGDEEEDDTQLSDVEMDMESEADKIISEHLLKFKDINGLVEQNVKLRNLVRSLSEQIESRETELKEKYEIDLKKKTDEASSKVAIVLERAEDQGKMIESLHASVAMYKRLYEEEQKLHSSNSLSSDPPPDVVQEGRTSYICLRIRRKLLREPKKKHLNAFEVWKKI